EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000001165 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 59757 bases
Position: chrGeneScaffold_4194:5259-65015
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000001048	RTC	PF01137.21	6.9e-80	1	1
ENSEEUP00000001048	RTC_insert	PF05189.13	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000001165	RTCA-201	1038	-	ENSEEUP00000001048	346 (aa)	-	UPI0000F6358F

Gene Model

Click here to download ENSEEUG00000001165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000001165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000001165	RTCA	100	82.659	ENSG00000137996	RTCA	98	95.833	Homo_sapiens
ENSEEUG00000001165	RTCA	99	64.516	ENSAPOG00000001345	rtca	89	64.516	Acanthochromis_polyacanthus
ENSEEUG00000001165	RTCA	68	85.169	ENSAMEG00000008855	RTCA	88	85.169	Ailuropoda_melanoleuca
ENSEEUG00000001165	RTCA	99	65.396	ENSACIG00000019643	rtca	90	65.396	Amphilophus_citrinellus
ENSEEUG00000001165	RTCA	100	63.873	ENSAOCG00000014979	rtca	91	63.873	Amphiprion_ocellaris
ENSEEUG00000001165	RTCA	100	63.873	ENSAPEG00000006945	rtca	91	63.873	Amphiprion_percula
ENSEEUG00000001165	RTCA	100	62.717	ENSATEG00000006315	rtca	91	62.717	Anabas_testudineus
ENSEEUG00000001165	RTCA	96	70.659	ENSAPLG00000015430	RTCA	91	70.659	Anas_platyrhynchos
ENSEEUG00000001165	RTCA	51	75.281	ENSACAG00000003290	RTCA	94	75.281	Anolis_carolinensis
ENSEEUG00000001165	RTCA	100	81.792	ENSANAG00000025446	RTCA	91	81.792	Aotus_nancymaae
ENSEEUG00000001165	RTCA	100	63.873	ENSACLG00000020770	rtca	91	63.873	Astatotilapia_calliptera
ENSEEUG00000001165	RTCA	100	65.896	ENSAMXG00000043271	rtca	91	65.896	Astyanax_mexicanus
ENSEEUG00000001165	RTCA	100	83.526	ENSBTAG00000006321	RTCA	91	83.526	Bos_taurus
ENSEEUG00000001165	RTCA	100	82.081	ENSCJAG00000003398	RTCA	91	82.081	Callithrix_jacchus
ENSEEUG00000001165	RTCA	100	84.971	ENSCAFG00000020010	RTCA	62	84.971	Canis_familiaris
ENSEEUG00000001165	RTCA	100	84.971	ENSCAFG00020011528	RTCA	52	84.971	Canis_lupus_dingo
ENSEEUG00000001165	RTCA	100	83.526	ENSCHIG00000018937	RTCA	91	83.526	Capra_hircus
ENSEEUG00000001165	RTCA	100	83.526	ENSTSYG00000011305	RTCA	91	83.526	Carlito_syrichta
ENSEEUG00000001165	RTCA	100	81.792	ENSCCAG00000021844	RTCA	99	81.792	Cebus_capucinus
ENSEEUG00000001165	RTCA	100	83.237	ENSCATG00000019364	RTCA	91	83.237	Cercocebus_atys
ENSEEUG00000001165	RTCA	82	85.563	ENSCLAG00000006125	RTCA	90	85.563	Chinchilla_lanigera
ENSEEUG00000001165	RTCA	100	83.237	ENSCSAG00000001509	RTCA	91	83.237	Chlorocebus_sabaeus
ENSEEUG00000001165	RTCA	100	83.526	ENSCHOG00000005211	RTCA	91	83.526	Choloepus_hoffmanni
ENSEEUG00000001165	RTCA	100	75.145	ENSCPBG00000026658	RTCA	97	75.145	Chrysemys_picta_bellii
ENSEEUG00000001165	RTCA	98	51.471	ENSCING00000007875	-	90	51.471	Ciona_intestinalis
ENSEEUG00000001165	RTCA	98	49.706	ENSCSAVG00000007269	-	90	49.706	Ciona_savignyi
ENSEEUG00000001165	RTCA	100	82.948	ENSCANG00000040106	RTCA	91	82.948	Colobus_angolensis_palliatus
ENSEEUG00000001165	RTCA	68	83.475	ENSCGRG00001013163	Rtca	75	83.475	Cricetulus_griseus_chok1gshd
ENSEEUG00000001165	RTCA	98	62.941	ENSCSEG00000000530	rtca	89	62.941	Cynoglossus_semilaevis
ENSEEUG00000001165	RTCA	100	52.023	ENSCVAG00000021809	rtca	91	52.023	Cyprinodon_variegatus
ENSEEUG00000001165	RTCA	100	66.474	ENSDARG00000002215	rtca	91	66.474	Danio_rerio
ENSEEUG00000001165	RTCA	100	83.526	ENSDNOG00000000456	RTCA	91	83.526	Dasypus_novemcinctus
ENSEEUG00000001165	RTCA	100	83.526	ENSDORG00000005448	Rtca	91	83.526	Dipodomys_ordii
ENSEEUG00000001165	RTCA	99	36.628	FBgn0025630	Rtca	92	36.628	Drosophila_melanogaster
ENSEEUG00000001165	RTCA	100	53.314	ENSEBUG00000008556	rtca	92	53.314	Eptatretus_burgeri
ENSEEUG00000001165	RTCA	100	84.393	ENSEASG00005015926	RTCA	91	84.393	Equus_asinus_asinus
ENSEEUG00000001165	RTCA	100	84.393	ENSECAG00000019831	RTCA	91	84.393	Equus_caballus
ENSEEUG00000001165	RTCA	99	64.223	ENSELUG00000003741	rtca	90	64.223	Esox_lucius
ENSEEUG00000001165	RTCA	100	84.682	ENSFCAG00000024460	RTCA	91	84.682	Felis_catus
ENSEEUG00000001165	RTCA	100	73.988	ENSFALG00000002443	RTCA	90	73.988	Ficedula_albicollis
ENSEEUG00000001165	RTCA	100	63.793	ENSFDAG00000016084	-	92	63.793	Fukomys_damarensis
ENSEEUG00000001165	RTCA	100	82.659	ENSFDAG00000012070	-	91	82.659	Fukomys_damarensis
ENSEEUG00000001165	RTCA	58	64.824	ENSFHEG00000002868	rtca	85	65.482	Fundulus_heteroclitus
ENSEEUG00000001165	RTCA	100	62.717	ENSGMOG00000013264	rtca	91	62.717	Gadus_morhua
ENSEEUG00000001165	RTCA	100	73.410	ENSGALG00000005277	RTCA	91	73.410	Gallus_gallus
ENSEEUG00000001165	RTCA	100	64.162	ENSGAFG00000011853	rtca	91	64.162	Gambusia_affinis
ENSEEUG00000001165	RTCA	100	63.584	ENSGACG00000013497	rtca	91	63.584	Gasterosteus_aculeatus
ENSEEUG00000001165	RTCA	88	72.222	ENSGAGG00000023306	RTCA	100	72.222	Gopherus_agassizii
ENSEEUG00000001165	RTCA	100	82.948	ENSGGOG00000009546	-	91	82.948	Gorilla_gorilla
ENSEEUG00000001165	RTCA	100	81.792	ENSGGOG00000044018	-	91	81.792	Gorilla_gorilla
ENSEEUG00000001165	RTCA	100	63.584	ENSHBUG00000002114	rtca	91	63.584	Haplochromis_burtoni
ENSEEUG00000001165	RTCA	100	83.526	ENSHGLG00000002617	RTCA	91	83.526	Heterocephalus_glaber_female
ENSEEUG00000001165	RTCA	100	83.526	ENSHGLG00100006056	RTCA	91	83.526	Heterocephalus_glaber_male
ENSEEUG00000001165	RTCA	100	57.803	ENSHCOG00000020628	rtca	81	58.358	Hippocampus_comes
ENSEEUG00000001165	RTCA	100	66.763	ENSIPUG00000024803	rtca	91	66.763	Ictalurus_punctatus
ENSEEUG00000001165	RTCA	100	76.012	ENSSTOG00000013528	-	91	76.012	Ictidomys_tridecemlineatus
ENSEEUG00000001165	RTCA	100	75.723	ENSSTOG00000033099	-	91	75.723	Ictidomys_tridecemlineatus
ENSEEUG00000001165	RTCA	100	58.092	ENSJJAG00000016178	Rtca	89	58.092	Jaculus_jaculus
ENSEEUG00000001165	RTCA	99	65.689	ENSKMAG00000006651	rtca	89	65.689	Kryptolebias_marmoratus
ENSEEUG00000001165	RTCA	99	63.050	ENSLBEG00000028971	rtca	90	63.050	Labrus_bergylta
ENSEEUG00000001165	RTCA	82	65.141	ENSLBEG00000002448	-	88	65.141	Labrus_bergylta
ENSEEUG00000001165	RTCA	100	69.942	ENSLACG00000013666	RTCA	91	69.942	Latimeria_chalumnae
ENSEEUG00000001165	RTCA	100	66.763	ENSLOCG00000000093	rtca	91	66.763	Lepisosteus_oculatus
ENSEEUG00000001165	RTCA	100	83.526	ENSLAFG00000001473	RTCA	91	83.526	Loxodonta_africana
ENSEEUG00000001165	RTCA	100	83.237	ENSMFAG00000034132	RTCA	91	83.237	Macaca_fascicularis
ENSEEUG00000001165	RTCA	100	83.237	ENSMMUG00000019105	RTCA	91	83.237	Macaca_mulatta
ENSEEUG00000001165	RTCA	80	85.145	ENSMNEG00000037163	RTCA	89	85.145	Macaca_nemestrina
ENSEEUG00000001165	RTCA	90	73.633	ENSMLEG00000042151	RTCA	89	73.633	Mandrillus_leucophaeus
ENSEEUG00000001165	RTCA	100	65.607	ENSMAMG00000016536	rtca	91	65.607	Mastacembelus_armatus
ENSEEUG00000001165	RTCA	100	63.873	ENSMZEG00005017945	rtca	91	63.873	Maylandia_zebra
ENSEEUG00000001165	RTCA	82	74.648	ENSMGAG00000006892	RTCA	89	74.648	Meleagris_gallopavo
ENSEEUG00000001165	RTCA	100	82.081	ENSMAUG00000008488	Rtca	91	82.081	Mesocricetus_auratus
ENSEEUG00000001165	RTCA	80	85.507	ENSMICG00000008643	RTCA	89	85.507	Microcebus_murinus
ENSEEUG00000001165	RTCA	100	82.659	ENSMOCG00000016660	Rtca	91	82.659	Microtus_ochrogaster
ENSEEUG00000001165	RTCA	80	68.116	ENSMMOG00000007750	rtca	90	68.116	Mola_mola
ENSEEUG00000001165	RTCA	100	81.503	ENSMODG00000003557	RTCA	91	81.503	Monodelphis_domestica
ENSEEUG00000001165	RTCA	100	65.318	ENSMALG00000020844	rtca	91	65.318	Monopterus_albus
ENSEEUG00000001165	RTCA	100	81.792	MGP_CAROLIEiJ_G0025565	Rtca	92	97.917	Mus_caroli
ENSEEUG00000001165	RTCA	100	81.503	ENSMUSG00000000339	Rtca	92	97.917	Mus_musculus
ENSEEUG00000001165	RTCA	100	82.081	MGP_PahariEiJ_G0027011	Rtca	92	97.917	Mus_pahari
ENSEEUG00000001165	RTCA	100	81.503	MGP_SPRETEiJ_G0026515	Rtca	92	97.917	Mus_spretus
ENSEEUG00000001165	RTCA	100	84.682	ENSMPUG00000012119	RTCA	91	84.682	Mustela_putorius_furo
ENSEEUG00000001165	RTCA	100	78.386	ENSMLUG00000009922	RTCA	91	78.386	Myotis_lucifugus
ENSEEUG00000001165	RTCA	100	81.503	ENSNGAG00000011540	Rtca	91	81.503	Nannospalax_galili
ENSEEUG00000001165	RTCA	100	63.584	ENSNBRG00000003062	rtca	91	63.584	Neolamprologus_brichardi
ENSEEUG00000001165	RTCA	100	82.948	ENSNLEG00000031426	RTCA	91	82.948	Nomascus_leucogenys
ENSEEUG00000001165	RTCA	55	94.545	ENSMEUG00000010030	-	52	94.545	Notamacropus_eugenii
ENSEEUG00000001165	RTCA	68	78.390	ENSOPRG00000012092	RTCA	62	78.390	Ochotona_princeps
ENSEEUG00000001165	RTCA	95	82.622	ENSODEG00000006990	RTCA	87	82.779	Octodon_degus
ENSEEUG00000001165	RTCA	100	63.584	ENSONIG00000007753	rtca	91	63.584	Oreochromis_niloticus
ENSEEUG00000001165	RTCA	82	80.986	ENSOANG00000012055	RTCA	88	80.986	Ornithorhynchus_anatinus
ENSEEUG00000001165	RTCA	100	84.393	ENSOCUG00000014247	RTCA	91	84.393	Oryctolagus_cuniculus
ENSEEUG00000001165	RTCA	100	63.584	ENSORLG00000013605	rtca	97	63.584	Oryzias_latipes
ENSEEUG00000001165	RTCA	100	63.584	ENSORLG00020001904	rtca	94	63.584	Oryzias_latipes_hni
ENSEEUG00000001165	RTCA	100	63.584	ENSORLG00015021064	rtca	91	63.584	Oryzias_latipes_hsok
ENSEEUG00000001165	RTCA	100	64.740	ENSOMEG00000000756	rtca	91	64.740	Oryzias_melastigma
ENSEEUG00000001165	RTCA	100	74.277	ENSOGAG00000005627	RTCA	91	74.277	Otolemur_garnettii
ENSEEUG00000001165	RTCA	82	84.507	ENSOARG00000018122	RTCA	89	84.507	Ovis_aries
ENSEEUG00000001165	RTCA	100	82.370	ENSPPAG00000035119	RTCA	89	84.420	Pan_paniscus
ENSEEUG00000001165	RTCA	100	84.393	ENSPPRG00000000350	RTCA	91	84.393	Panthera_pardus
ENSEEUG00000001165	RTCA	100	84.393	ENSPTIG00000012816	RTCA	91	84.393	Panthera_tigris_altaica
ENSEEUG00000001165	RTCA	100	82.370	ENSPTRG00000001004	RTCA	89	84.420	Pan_troglodytes
ENSEEUG00000001165	RTCA	100	82.948	ENSPANG00000000346	RTCA	91	82.948	Papio_anubis
ENSEEUG00000001165	RTCA	99	66.957	ENSPKIG00000001653	rtca	91	66.957	Paramormyrops_kingsleyae
ENSEEUG00000001165	RTCA	100	74.855	ENSPSIG00000011408	RTCA	91	74.855	Pelodiscus_sinensis
ENSEEUG00000001165	RTCA	100	82.948	ENSPEMG00000018582	Rtca	91	82.948	Peromyscus_maniculatus_bairdii
ENSEEUG00000001165	RTCA	98	52.464	ENSPMAG00000009110	rtca	91	52.464	Petromyzon_marinus
ENSEEUG00000001165	RTCA	100	81.792	ENSPCIG00000007684	RTCA	91	81.792	Phascolarctos_cinereus
ENSEEUG00000001165	RTCA	100	64.740	ENSPFOG00000004824	rtca	91	64.740	Poecilia_formosa
ENSEEUG00000001165	RTCA	100	64.740	ENSPLAG00000011753	rtca	91	64.740	Poecilia_latipinna
ENSEEUG00000001165	RTCA	100	64.740	ENSPMEG00000020469	rtca	91	64.740	Poecilia_mexicana
ENSEEUG00000001165	RTCA	100	65.318	ENSPREG00000001365	rtca	91	65.318	Poecilia_reticulata
ENSEEUG00000001165	RTCA	100	82.659	ENSPPYG00000001115	RTCA	91	82.659	Pongo_abelii
ENSEEUG00000001165	RTCA	100	80.347	ENSPCAG00000005076	RTCA	91	80.347	Procavia_capensis
ENSEEUG00000001165	RTCA	100	84.393	ENSPCOG00000005603	RTCA	92	100.000	Propithecus_coquereli
ENSEEUG00000001165	RTCA	100	83.815	ENSPVAG00000009478	RTCA	91	83.815	Pteropus_vampyrus
ENSEEUG00000001165	RTCA	100	63.873	ENSPNYG00000004722	rtca	91	63.873	Pundamilia_nyererei
ENSEEUG00000001165	RTCA	100	65.896	ENSPNAG00000022270	rtca	91	65.896	Pygocentrus_nattereri
ENSEEUG00000001165	RTCA	100	81.792	ENSRNOG00000014575	Rtca	91	81.792	Rattus_norvegicus
ENSEEUG00000001165	RTCA	100	82.659	ENSRBIG00000041180	RTCA	91	82.659	Rhinopithecus_bieti
ENSEEUG00000001165	RTCA	100	82.659	ENSRROG00000024929	RTCA	91	82.659	Rhinopithecus_roxellana
ENSEEUG00000001165	RTCA	100	81.503	ENSSBOG00000028626	RTCA	91	81.503	Saimiri_boliviensis_boliviensis
ENSEEUG00000001165	RTCA	100	81.503	ENSSHAG00000001758	RTCA	91	81.503	Sarcophilus_harrisii
ENSEEUG00000001165	RTCA	98	62.647	ENSSMAG00000014680	rtca	88	62.647	Scophthalmus_maximus
ENSEEUG00000001165	RTCA	98	64.706	ENSSDUG00000015585	rtca	88	64.706	Seriola_dumerili
ENSEEUG00000001165	RTCA	96	64.955	ENSSLDG00000018985	rtca	86	64.955	Seriola_lalandi_dorsalis
ENSEEUG00000001165	RTCA	82	79.225	ENSSARG00000013993	RTCA	90	79.225	Sorex_araneus
ENSEEUG00000001165	RTCA	100	63.006	ENSSPAG00000011938	rtca	91	63.006	Stegastes_partitus
ENSEEUG00000001165	RTCA	100	83.526	ENSSSCG00000006865	RTCA	91	83.526	Sus_scrofa
ENSEEUG00000001165	RTCA	100	74.566	ENSTGUG00000005154	RTCA	91	74.566	Taeniopygia_guttata
ENSEEUG00000001165	RTCA	100	64.162	ENSTRUG00000008799	rtca	91	64.162	Takifugu_rubripes
ENSEEUG00000001165	RTCA	100	65.896	ENSTNIG00000004725	rtca	91	65.896	Tetraodon_nigroviridis
ENSEEUG00000001165	RTCA	100	82.659	ENSTTRG00000015327	RTCA	91	82.659	Tursiops_truncatus
ENSEEUG00000001165	RTCA	100	84.104	ENSUAMG00000017265	RTCA	94	84.104	Ursus_americanus
ENSEEUG00000001165	RTCA	100	84.104	ENSUMAG00000007881	RTCA	91	84.104	Ursus_maritimus
ENSEEUG00000001165	RTCA	82	74.648	ENSVPAG00000001039	RTCA	75	74.648	Vicugna_pacos
ENSEEUG00000001165	RTCA	100	84.682	ENSVVUG00000022041	RTCA	61	84.682	Vulpes_vulpes
ENSEEUG00000001165	RTCA	99	56.609	ENSXETG00000031661	RTCA	91	56.609	Xenopus_tropicalis
ENSEEUG00000001165	RTCA	100	57.803	ENSXCOG00000008002	rtca	91	57.803	Xiphophorus_couchianus
ENSEEUG00000001165	RTCA	100	64.451	ENSXMAG00000005482	rtca	91	64.451	Xiphophorus_maculatus