EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000001233 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 10581 bases
Position: chrGeneScaffold_4639:1079-11659
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000001104	MMR_HSR1	PF01926.23	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000001232	-	609	-	ENSEEUP00000001104	202 (aa)	-	UPI0000F618EC

Gene Model

Click here to download ENSEEUG00000001233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000001233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000001233	-	79	37.654	ENSEEUG00000003058	KRAS	85	37.654
ENSEEUG00000001233	-	99	51.741	ENSEEUG00000011721	RAB1A	99	51.741
ENSEEUG00000001233	-	79	34.969	ENSEEUG00000007832	MRAS	78	34.969
ENSEEUG00000001233	-	73	37.333	ENSEEUG00000014548	HRAS	86	37.333
ENSEEUG00000001233	-	66	42.647	ENSEEUG00000004731	RAB34	89	42.647
ENSEEUG00000001233	-	67	49.265	ENSEEUG00000009165	-	95	49.265
ENSEEUG00000001233	-	62	30.952	ENSEEUG00000004224	ARL3	72	30.952
ENSEEUG00000001233	-	80	39.881	ENSEEUG00000005264	RAB9B	83	39.881
ENSEEUG00000001233	-	95	34.896	ENSEEUG00000002790	RAB5C	89	34.896
ENSEEUG00000001233	-	66	30.000	ENSEEUG00000000023	RASL11B	56	30.000
ENSEEUG00000001233	-	99	50.500	ENSEEUG00000013465	RAB1B	99	50.500
ENSEEUG00000001233	-	90	41.530	ENSEEUG00000014804	RAB25	78	41.530
ENSEEUG00000001233	-	95	34.375	ENSEEUG00000006745	RAB5B	89	34.375
ENSEEUG00000001233	-	70	30.282	ENSEEUG00000001438	-	85	30.282
ENSEEUG00000001233	-	95	36.979	ENSEEUG00000009044	RAB5A	89	36.979
ENSEEUG00000001233	-	69	44.604	ENSEEUG00000013074	RAB14	65	44.604
ENSEEUG00000001233	-	81	36.970	ENSEEUG00000015045	RAB23	69	36.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000001233	-	99	90.099	ENSG00000143545	RAB13	99	90.099	Homo_sapiens
ENSEEUG00000001233	-	93	76.720	ENSACIG00000008584	rab13	90	76.720	Amphilophus_citrinellus
ENSEEUG00000001233	-	99	90.099	ENSANAG00000030247	-	99	90.099	Aotus_nancymaae
ENSEEUG00000001233	-	100	75.369	ENSAMXG00000030712	rab13	100	75.369	Astyanax_mexicanus
ENSEEUG00000001233	-	100	88.670	ENSBTAG00000017604	RAB13	100	88.670	Bos_taurus
ENSEEUG00000001233	-	88	43.407	WBGene00019317	K02E10.1	83	43.407	Caenorhabditis_elegans
ENSEEUG00000001233	-	93	91.005	ENSCJAG00000009933	-	99	89.604	Callithrix_jacchus
ENSEEUG00000001233	-	100	88.177	ENSCHIG00000022271	-	100	88.177	Capra_hircus
ENSEEUG00000001233	-	99	87.129	ENSCPOG00000011491	-	99	87.129	Cavia_porcellus
ENSEEUG00000001233	-	99	89.604	ENSCCAG00000028502	-	99	89.604	Cebus_capucinus
ENSEEUG00000001233	-	99	90.099	ENSCATG00000041779	-	99	90.099	Cercocebus_atys
ENSEEUG00000001233	-	99	86.634	ENSCLAG00000006603	-	99	86.634	Chinchilla_lanigera
ENSEEUG00000001233	-	99	90.099	ENSCANG00000036573	-	99	90.099	Colobus_angolensis_palliatus
ENSEEUG00000001233	-	99	87.129	ENSCGRG00001021505	Rab13	99	87.129	Cricetulus_griseus_chok1gshd
ENSEEUG00000001233	-	99	87.129	ENSCGRG00000012126	Rab13	99	87.129	Cricetulus_griseus_crigri
ENSEEUG00000001233	-	100	72.906	ENSCSEG00000002358	rab13	100	72.906	Cynoglossus_semilaevis
ENSEEUG00000001233	-	100	75.369	ENSDARG00000034771	rab13	100	75.369	Danio_rerio
ENSEEUG00000001233	-	99	89.109	ENSDORG00000001591	Rab13	99	89.109	Dipodomys_ordii
ENSEEUG00000001233	-	99	90.594	ENSEASG00005000683	-	99	90.594	Equus_asinus_asinus
ENSEEUG00000001233	-	99	90.594	ENSECAG00000016551	RAB13	99	90.594	Equus_caballus
ENSEEUG00000001233	-	100	73.892	ENSELUG00000012801	rab13	100	73.892	Esox_lucius
ENSEEUG00000001233	-	99	86.139	ENSFCAG00000045269	-	99	86.139	Felis_catus
ENSEEUG00000001233	-	65	97.727	ENSFDAG00000014469	-	100	97.727	Fukomys_damarensis
ENSEEUG00000001233	-	100	72.906	ENSFHEG00000021221	rab13	95	82.081	Fundulus_heteroclitus
ENSEEUG00000001233	-	100	73.399	ENSGACG00000011925	rab13	99	73.399	Gasterosteus_aculeatus
ENSEEUG00000001233	-	100	79.803	ENSGAGG00000000742	-	100	79.803	Gopherus_agassizii
ENSEEUG00000001233	-	99	90.099	ENSGGOG00000023693	RAB13	99	90.099	Gorilla_gorilla
ENSEEUG00000001233	-	99	84.158	ENSHGLG00000008749	RAB13	99	84.158	Heterocephalus_glaber_female
ENSEEUG00000001233	-	99	84.158	ENSHGLG00100013608	RAB13	99	84.158	Heterocephalus_glaber_male
ENSEEUG00000001233	-	100	71.921	ENSHCOG00000007440	rab13	97	80.682	Hippocampus_comes
ENSEEUG00000001233	-	100	73.399	ENSIPUG00000003199	rab13	100	73.399	Ictalurus_punctatus
ENSEEUG00000001233	-	99	89.604	ENSSTOG00000011222	-	99	89.604	Ictidomys_tridecemlineatus
ENSEEUG00000001233	-	99	86.634	ENSJJAG00000010575	Rab13	99	86.634	Jaculus_jaculus
ENSEEUG00000001233	-	100	73.399	ENSKMAG00000001908	rab13	100	73.399	Kryptolebias_marmoratus
ENSEEUG00000001233	-	100	71.921	ENSLBEG00000026779	rab13	100	71.921	Labrus_bergylta
ENSEEUG00000001233	-	92	70.968	ENSLACG00000008103	-	100	70.968	Latimeria_chalumnae
ENSEEUG00000001233	-	99	90.099	ENSMFAG00000041018	RAB13	99	90.099	Macaca_fascicularis
ENSEEUG00000001233	-	99	90.099	ENSMNEG00000028951	-	99	90.099	Macaca_nemestrina
ENSEEUG00000001233	-	99	90.099	ENSMLEG00000042247	-	99	90.099	Mandrillus_leucophaeus
ENSEEUG00000001233	-	100	72.906	ENSMAMG00000014602	rab13	100	72.906	Mastacembelus_armatus
ENSEEUG00000001233	-	99	86.634	ENSMAUG00000015713	Rab13	99	86.634	Mesocricetus_auratus
ENSEEUG00000001233	-	99	89.604	ENSMICG00000010340	-	99	89.604	Microcebus_murinus
ENSEEUG00000001233	-	99	88.119	ENSMOCG00000021448	Rab13	99	88.119	Microtus_ochrogaster
ENSEEUG00000001233	-	99	87.129	ENSMODG00000017295	-	84	87.129	Monodelphis_domestica
ENSEEUG00000001233	-	99	87.129	MGP_CAROLIEiJ_G0025227	Rab13	99	87.129	Mus_caroli
ENSEEUG00000001233	-	99	86.634	ENSMUSG00000027935	Rab13	99	86.634	Mus_musculus
ENSEEUG00000001233	-	100	86.700	MGP_PahariEiJ_G0026671	Rab13	100	86.700	Mus_pahari
ENSEEUG00000001233	-	99	89.604	ENSNGAG00000010309	Rab13	99	89.604	Nannospalax_galili
ENSEEUG00000001233	-	100	73.399	ENSNBRG00000004124	rab13	100	73.399	Neolamprologus_brichardi
ENSEEUG00000001233	-	99	90.099	ENSNLEG00000028944	-	99	90.099	Nomascus_leucogenys
ENSEEUG00000001233	-	99	88.177	ENSMEUG00000009667	-	99	88.177	Notamacropus_eugenii
ENSEEUG00000001233	-	63	98.425	ENSODEG00000012634	-	100	98.425	Octodon_degus
ENSEEUG00000001233	-	99	85.149	ENSODEG00000010443	-	99	85.149	Octodon_degus
ENSEEUG00000001233	-	100	73.399	ENSONIG00000006340	rab13	100	73.399	Oreochromis_niloticus
ENSEEUG00000001233	-	88	90.449	ENSOCUG00000006286	-	100	90.449	Oryctolagus_cuniculus
ENSEEUG00000001233	-	100	73.399	ENSOMEG00000008210	rab13	100	73.399	Oryzias_melastigma
ENSEEUG00000001233	-	99	86.634	ENSOGAG00000016969	-	99	86.634	Otolemur_garnettii
ENSEEUG00000001233	-	99	90.099	ENSPPAG00000028435	-	99	90.099	Pan_paniscus
ENSEEUG00000001233	-	99	86.139	ENSPPRG00000008865	-	99	86.139	Panthera_pardus
ENSEEUG00000001233	-	99	90.099	ENSPTRG00000001370	RAB13	99	90.099	Pan_troglodytes
ENSEEUG00000001233	-	99	90.099	ENSPANG00000004479	-	99	90.099	Papio_anubis
ENSEEUG00000001233	-	100	73.399	ENSPMGG00000007680	rab13	100	73.399	Periophthalmus_magnuspinnatus
ENSEEUG00000001233	-	53	98.148	ENSPEMG00000017353	-	81	98.148	Peromyscus_maniculatus_bairdii
ENSEEUG00000001233	-	99	88.670	ENSPCIG00000029350	-	99	88.670	Phascolarctos_cinereus
ENSEEUG00000001233	-	94	73.333	ENSPLAG00000005832	RAB13	93	80.347	Poecilia_latipinna
ENSEEUG00000001233	-	90	77.049	ENSPREG00000017567	rab13	100	71.921	Poecilia_reticulata
ENSEEUG00000001233	-	99	90.099	ENSPPYG00000000790	-	99	90.099	Pongo_abelii
ENSEEUG00000001233	-	99	90.594	ENSPCOG00000012189	-	99	90.594	Propithecus_coquereli
ENSEEUG00000001233	-	99	89.109	ENSPVAG00000011095	-	99	89.109	Pteropus_vampyrus
ENSEEUG00000001233	-	93	77.249	ENSPNAG00000004189	rab13	96	77.249	Pygocentrus_nattereri
ENSEEUG00000001233	-	99	87.624	ENSRNOG00000016733	Rab13	99	87.624	Rattus_norvegicus
ENSEEUG00000001233	-	99	89.604	ENSRBIG00000008552	-	99	89.604	Rhinopithecus_bieti
ENSEEUG00000001233	-	99	89.604	ENSRROG00000036885	-	99	89.604	Rhinopithecus_roxellana
ENSEEUG00000001233	-	99	89.604	ENSSBOG00000020342	-	99	89.604	Saimiri_boliviensis_boliviensis
ENSEEUG00000001233	-	99	87.685	ENSSHAG00000011866	-	99	87.685	Sarcophilus_harrisii
ENSEEUG00000001233	-	99	89.604	ENSSSCG00000006564	-	99	89.604	Sus_scrofa
ENSEEUG00000001233	-	100	73.892	ENSTRUG00000024177	rab13	100	73.892	Takifugu_rubripes
ENSEEUG00000001233	-	99	91.089	ENSTBEG00000012734	-	99	91.089	Tupaia_belangeri
ENSEEUG00000001233	-	99	90.594	ENSTTRG00000011183	-	99	90.594	Tursiops_truncatus
ENSEEUG00000001233	-	71	74.483	ENSXETG00000020729	rab13	100	71.605	Xenopus_tropicalis
ENSEEUG00000001233	-	85	79.191	ENSXCOG00000019533	rab13	93	79.191	Xiphophorus_couchianus