EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000001238 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 15693 bases
Position: chrGeneScaffold_8041:21083-36775
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000001109	zf-met	PF12874.7	8.4e-05	1	1
ENSEEUP00000001109	PAP_assoc	PF03828.19	6e-07	1	1
ENSEEUP00000001109	RRM_1	PF00076.22	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000001237	-	2583	-	ENSEEUP00000001109	860 (aa)	-	UPI0000F625E9

Gene Model

Click here to download ENSEEUG00000001238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000001238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000001238	-	100	82.494	ENSG00000149016	TUT1	100	89.333	Homo_sapiens
ENSEEUG00000001238	-	86	40.529	ENSAPOG00000016423	tut1	92	38.605	Acanthochromis_polyacanthus
ENSEEUG00000001238	-	99	81.651	ENSAMEG00000006723	-	99	81.651	Ailuropoda_melanoleuca
ENSEEUG00000001238	-	86	38.596	ENSACIG00000000948	tut1	62	52.878	Amphilophus_citrinellus
ENSEEUG00000001238	-	86	40.708	ENSAOCG00000021912	tut1	93	39.726	Amphiprion_ocellaris
ENSEEUG00000001238	-	86	40.708	ENSAPEG00000005144	tut1	93	39.726	Amphiprion_percula
ENSEEUG00000001238	-	86	39.013	ENSATEG00000014590	tut1	61	49.104	Anabas_testudineus
ENSEEUG00000001238	-	100	81.465	ENSANAG00000029063	-	100	81.465	Aotus_nancymaae
ENSEEUG00000001238	-	86	39.381	ENSACLG00000013406	tut1	92	37.037	Astatotilapia_calliptera
ENSEEUG00000001238	-	69	49.462	ENSAMXG00000042139	tut1	92	38.863	Astyanax_mexicanus
ENSEEUG00000001238	-	99	82.110	ENSBTAG00000011846	TUT1	99	82.110	Bos_taurus
ENSEEUG00000001238	-	100	81.808	ENSCJAG00000033294	-	100	81.808	Callithrix_jacchus
ENSEEUG00000001238	-	99	80.435	ENSCAFG00000015822	TUT1	99	80.549	Canis_familiaris
ENSEEUG00000001238	-	99	80.435	ENSCAFG00020013039	-	99	80.549	Canis_lupus_dingo
ENSEEUG00000001238	-	99	82.110	ENSCHIG00000006765	-	99	82.110	Capra_hircus
ENSEEUG00000001238	-	99	76.174	ENSTSYG00000000147	-	95	76.349	Carlito_syrichta
ENSEEUG00000001238	-	79	75.581	ENSCAPG00000013001	-	99	75.581	Cavia_aperea
ENSEEUG00000001238	-	99	72.350	ENSCPOG00000014281	-	99	72.350	Cavia_porcellus
ENSEEUG00000001238	-	100	82.609	ENSCCAG00000018819	-	96	82.609	Cebus_capucinus
ENSEEUG00000001238	-	100	82.609	ENSCATG00000036770	-	96	82.609	Cercocebus_atys
ENSEEUG00000001238	-	99	73.349	ENSCLAG00000000215	-	99	73.349	Chinchilla_lanigera
ENSEEUG00000001238	-	90	81.472	ENSCSAG00000006566	-	100	81.472	Chlorocebus_sabaeus
ENSEEUG00000001238	-	73	77.966	ENSCHOG00000007746	-	72	77.966	Choloepus_hoffmanni
ENSEEUG00000001238	-	86	52.444	ENSCPBG00000017909	-	84	60.674	Chrysemys_picta_bellii
ENSEEUG00000001238	-	100	82.688	ENSCANG00000043244	-	96	82.688	Colobus_angolensis_palliatus
ENSEEUG00000001238	-	99	72.612	ENSCGRG00001017583	Tut1	99	72.612	Cricetulus_griseus_chok1gshd
ENSEEUG00000001238	-	99	72.612	ENSCGRG00000015008	Tut1	99	72.612	Cricetulus_griseus_crigri
ENSEEUG00000001238	-	86	37.391	ENSCSEG00000012807	tut1	93	36.890	Cynoglossus_semilaevis
ENSEEUG00000001238	-	76	42.776	ENSCVAG00000005396	tut1	62	50.000	Cyprinodon_variegatus
ENSEEUG00000001238	-	87	42.917	ENSDARG00000057321	tut1	91	42.130	Danio_rerio
ENSEEUG00000001238	-	99	81.214	ENSDNOG00000038908	-	99	81.214	Dasypus_novemcinctus
ENSEEUG00000001238	-	99	79.769	ENSDORG00000004018	Tut1	98	79.769	Dipodomys_ordii
ENSEEUG00000001238	-	85	41.232	ENSEBUG00000014170	tut1	54	52.453	Eptatretus_burgeri
ENSEEUG00000001238	-	99	84.289	ENSEASG00005007531	-	99	84.289	Equus_asinus_asinus
ENSEEUG00000001238	-	99	84.633	ENSECAG00000009471	-	98	84.633	Equus_caballus
ENSEEUG00000001238	-	99	33.989	ENSELUG00000011532	tut1	93	40.611	Esox_lucius
ENSEEUG00000001238	-	99	82.589	ENSFCAG00000008859	-	96	82.589	Felis_catus
ENSEEUG00000001238	-	99	65.394	ENSFDAG00000021131	-	99	73.239	Fukomys_damarensis
ENSEEUG00000001238	-	87	37.500	ENSFHEG00000006279	tut1	92	35.981	Fundulus_heteroclitus
ENSEEUG00000001238	-	87	38.915	ENSGMOG00000013378	tut1	62	53.285	Gadus_morhua
ENSEEUG00000001238	-	85	37.500	ENSGACG00000009956	tut1	98	34.563	Gasterosteus_aculeatus
ENSEEUG00000001238	-	92	46.047	ENSGAGG00000007912	-	68	55.738	Gopherus_agassizii
ENSEEUG00000001238	-	100	82.380	ENSGGOG00000013564	-	96	82.380	Gorilla_gorilla
ENSEEUG00000001238	-	86	38.938	ENSHBUG00000022855	tut1	92	36.574	Haplochromis_burtoni
ENSEEUG00000001238	-	99	72.286	ENSHGLG00000002742	-	99	72.286	Heterocephalus_glaber_female
ENSEEUG00000001238	-	99	71.807	ENSHGLG00100017588	-	99	71.807	Heterocephalus_glaber_male
ENSEEUG00000001238	-	99	34.421	ENSHCOG00000016358	tut1	61	52.000	Hippocampus_comes
ENSEEUG00000001238	-	87	43.304	ENSIPUG00000017671	tut1	93	41.981	Ictalurus_punctatus
ENSEEUG00000001238	-	99	80.664	ENSSTOG00000002859	-	99	80.664	Ictidomys_tridecemlineatus
ENSEEUG00000001238	-	99	80.347	ENSJJAG00000022329	Tut1	99	80.347	Jaculus_jaculus
ENSEEUG00000001238	-	86	37.220	ENSKMAG00000010023	tut1	62	51.439	Kryptolebias_marmoratus
ENSEEUG00000001238	-	87	35.398	ENSLBEG00000014969	tut1	62	48.029	Labrus_bergylta
ENSEEUG00000001238	-	81	42.667	ENSLACG00000011278	tut1	76	51.282	Latimeria_chalumnae
ENSEEUG00000001238	-	88	42.437	ENSLOCG00000013105	tut1	93	41.743	Lepisosteus_oculatus
ENSEEUG00000001238	-	99	81.537	ENSLAFG00000003340	-	99	81.537	Loxodonta_africana
ENSEEUG00000001238	-	100	82.380	ENSMFAG00000000912	-	96	82.380	Macaca_fascicularis
ENSEEUG00000001238	-	100	82.494	ENSMMUG00000006595	-	100	88.000	Macaca_mulatta
ENSEEUG00000001238	-	100	82.265	ENSMNEG00000029841	-	96	82.265	Macaca_nemestrina
ENSEEUG00000001238	-	100	82.494	ENSMLEG00000040498	-	96	82.494	Mandrillus_leucophaeus
ENSEEUG00000001238	-	86	40.088	ENSMAMG00000008173	tut1	92	38.140	Mastacembelus_armatus
ENSEEUG00000001238	-	86	39.381	ENSMZEG00005009777	tut1	92	37.037	Maylandia_zebra
ENSEEUG00000001238	-	87	80.000	ENSMAUG00000012453	Tut1	98	80.000	Mesocricetus_auratus
ENSEEUG00000001238	-	100	81.558	ENSMICG00000009841	-	96	81.558	Microcebus_murinus
ENSEEUG00000001238	-	99	72.957	ENSMOCG00000015834	Tut1	99	72.957	Microtus_ochrogaster
ENSEEUG00000001238	-	55	51.625	ENSMMOG00000002589	tut1	61	51.625	Mola_mola
ENSEEUG00000001238	-	99	65.207	ENSMODG00000007710	-	99	65.632	Monodelphis_domestica
ENSEEUG00000001238	-	87	41.667	ENSMALG00000003624	tut1	92	39.815	Monopterus_albus
ENSEEUG00000001238	-	99	71.940	MGP_CAROLIEiJ_G0022670	Tut1	99	72.055	Mus_caroli
ENSEEUG00000001238	-	99	73.072	ENSMUSG00000071645	Tut1	99	73.072	Mus_musculus
ENSEEUG00000001238	-	99	73.618	MGP_PahariEiJ_G0014164	Tut1	99	73.618	Mus_pahari
ENSEEUG00000001238	-	99	72.727	MGP_SPRETEiJ_G0023583	Tut1	99	72.727	Mus_spretus
ENSEEUG00000001238	-	99	82.110	ENSMPUG00000013938	-	99	82.110	Mustela_putorius_furo
ENSEEUG00000001238	-	99	73.654	ENSMLUG00000000349	-	99	73.654	Myotis_lucifugus
ENSEEUG00000001238	-	99	78.136	ENSNGAG00000002988	Tut1	99	78.136	Nannospalax_galili
ENSEEUG00000001238	-	86	39.823	ENSNBRG00000022055	tut1	92	37.500	Neolamprologus_brichardi
ENSEEUG00000001238	-	100	82.609	ENSNLEG00000003780	-	96	82.609	Nomascus_leucogenys
ENSEEUG00000001238	-	92	70.213	ENSMEUG00000012756	-	91	70.213	Notamacropus_eugenii
ENSEEUG00000001238	-	67	82.406	ENSOPRG00000011835	-	74	82.406	Ochotona_princeps
ENSEEUG00000001238	-	99	70.370	ENSODEG00000002204	-	100	70.370	Octodon_degus
ENSEEUG00000001238	-	86	40.359	ENSONIG00000019913	tut1	93	38.991	Oreochromis_niloticus
ENSEEUG00000001238	-	57	66.871	ENSOANG00000012458	-	97	66.531	Ornithorhynchus_anatinus
ENSEEUG00000001238	-	99	79.755	ENSOCUG00000017215	-	99	79.755	Oryctolagus_cuniculus
ENSEEUG00000001238	-	61	45.238	ENSORLG00000004342	tut1	62	49.823	Oryzias_latipes
ENSEEUG00000001238	-	61	44.940	ENSORLG00015018834	tut1	92	35.071	Oryzias_latipes_hsok
ENSEEUG00000001238	-	87	37.500	ENSOMEG00000005129	tut1	63	48.763	Oryzias_melastigma
ENSEEUG00000001238	-	99	81.250	ENSOGAG00000000828	-	99	81.250	Otolemur_garnettii
ENSEEUG00000001238	-	99	77.627	ENSOARG00000015269	-	99	78.345	Ovis_aries
ENSEEUG00000001238	-	100	82.838	ENSPPAG00000037200	-	96	82.838	Pan_paniscus
ENSEEUG00000001238	-	99	82.474	ENSPPRG00000000257	-	99	82.474	Panthera_pardus
ENSEEUG00000001238	-	99	82.589	ENSPTIG00000017573	-	96	82.589	Panthera_tigris_altaica
ENSEEUG00000001238	-	100	82.609	ENSPTRG00000003770	TUT1	96	82.609	Pan_troglodytes
ENSEEUG00000001238	-	89	79.718	ENSPANG00000010908	-	92	79.613	Papio_anubis
ENSEEUG00000001238	-	91	40.506	ENSPKIG00000022062	tut1	95	39.352	Paramormyrops_kingsleyae
ENSEEUG00000001238	-	99	43.131	ENSPSIG00000004972	-	89	49.097	Pelodiscus_sinensis
ENSEEUG00000001238	-	87	38.636	ENSPMGG00000004299	tut1	62	49.819	Periophthalmus_magnuspinnatus
ENSEEUG00000001238	-	99	73.072	ENSPEMG00000018332	Tut1	99	73.533	Peromyscus_maniculatus_bairdii
ENSEEUG00000001238	-	77	36.572	ENSPMAG00000005825	tut1	91	36.086	Petromyzon_marinus
ENSEEUG00000001238	-	99	64.179	ENSPCIG00000017805	-	99	63.146	Phascolarctos_cinereus
ENSEEUG00000001238	-	88	36.347	ENSPFOG00000016195	tut1	92	35.507	Poecilia_formosa
ENSEEUG00000001238	-	88	36.347	ENSPLAG00000022064	tut1	92	35.676	Poecilia_latipinna
ENSEEUG00000001238	-	87	36.528	ENSPMEG00000019175	tut1	92	35.688	Poecilia_mexicana
ENSEEUG00000001238	-	88	36.638	ENSPREG00000020464	tut1	92	35.326	Poecilia_reticulata
ENSEEUG00000001238	-	100	82.932	ENSPPYG00000003162	-	100	82.932	Pongo_abelii
ENSEEUG00000001238	-	97	77.633	ENSPCAG00000002956	-	99	77.633	Procavia_capensis
ENSEEUG00000001238	-	100	80.385	ENSPCOG00000017464	-	97	80.385	Propithecus_coquereli
ENSEEUG00000001238	-	85	78.615	ENSPVAG00000003444	-	85	78.615	Pteropus_vampyrus
ENSEEUG00000001238	-	86	38.496	ENSPNYG00000018764	tut1	92	36.111	Pundamilia_nyererei
ENSEEUG00000001238	-	68	49.462	ENSPNAG00000011889	tut1	92	41.429	Pygocentrus_nattereri
ENSEEUG00000001238	-	99	72.465	ENSRNOG00000020047	Tut1	99	73.041	Rattus_norvegicus
ENSEEUG00000001238	-	100	82.688	ENSRBIG00000021240	-	96	82.688	Rhinopithecus_bieti
ENSEEUG00000001238	-	100	82.688	ENSRROG00000043315	-	100	82.688	Rhinopithecus_roxellana
ENSEEUG00000001238	-	100	82.037	ENSSBOG00000003827	-	100	82.037	Saimiri_boliviensis_boliviensis
ENSEEUG00000001238	-	97	63.722	ENSSHAG00000003368	-	99	63.977	Sarcophilus_harrisii
ENSEEUG00000001238	-	86	43.498	ENSSFOG00015005639	tut1	64	51.399	Scleropages_formosus
ENSEEUG00000001238	-	99	32.522	ENSSMAG00000011449	tut1	61	50.360	Scophthalmus_maximus
ENSEEUG00000001238	-	85	37.838	ENSSDUG00000003613	tut1	92	37.727	Seriola_dumerili
ENSEEUG00000001238	-	85	37.838	ENSSLDG00000022487	tut1	92	37.727	Seriola_lalandi_dorsalis
ENSEEUG00000001238	-	85	47.556	ENSSPUG00000008143	-	90	45.161	Sphenodon_punctatus
ENSEEUG00000001238	-	86	41.964	ENSSPAG00000023390	tut1	92	39.720	Stegastes_partitus
ENSEEUG00000001238	-	90	80.511	ENSSSCG00000013063	-	99	81.392	Sus_scrofa
ENSEEUG00000001238	-	85	39.336	ENSTRUG00000016451	tut1	60	53.237	Takifugu_rubripes
ENSEEUG00000001238	-	73	40.399	ENSTNIG00000012852	tut1	99	41.810	Tetraodon_nigroviridis
ENSEEUG00000001238	-	99	80.597	ENSTTRG00000002460	-	99	80.023	Tursiops_truncatus
ENSEEUG00000001238	-	99	81.901	ENSUAMG00000027237	-	99	81.901	Ursus_americanus
ENSEEUG00000001238	-	99	81.901	ENSUMAG00000012710	-	99	81.901	Ursus_maritimus
ENSEEUG00000001238	-	78	80.981	ENSVPAG00000005413	-	100	80.981	Vicugna_pacos
ENSEEUG00000001238	-	99	80.664	ENSVVUG00000029882	-	99	80.778	Vulpes_vulpes
ENSEEUG00000001238	-	86	44.286	ENSXETG00000005640	tut1	89	44.444	Xenopus_tropicalis
ENSEEUG00000001238	-	52	35.983	ENSXCOG00000017824	tut1	79	58.824	Xiphophorus_couchianus
ENSEEUG00000001238	-	88	37.069	ENSXMAG00000027272	tut1	62	50.365	Xiphophorus_maculatus