EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000001287 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 32393 bases
Position: chrGeneScaffold_5899:36334-68726
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000001156	KH_1	PF00013.29	3.8e-50	1	3
ENSEEUP00000001156	KH_1	PF00013.29	3.8e-50	2	3
ENSEEUP00000001156	KH_1	PF00013.29	3.8e-50	3	3
ENSEEUP00000001156	KH_2	PF07650.17	5.5e-19	1	2
ENSEEUP00000001156	KH_2	PF07650.17	5.5e-19	2	2
ENSEEUP00000001156	DUF1897	PF09005.10	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000001291	FUBP1-201	1968	-	ENSEEUP00000001156	655 (aa)	-	UPI0000F632B3

Gene Model

Click here to download ENSEEUG00000001287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000001287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000001287	FUBP1	55	57.967	ENSEEUG00000000550	FUBP3	61	64.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000001287	FUBP1	89	97.917	ENSG00000162613	FUBP1	98	100.000	Homo_sapiens
ENSEEUG00000001287	FUBP1	86	67.530	ENSAPOG00000014845	fubp1	66	80.731	Acanthochromis_polyacanthus
ENSEEUG00000001287	FUBP1	98	82.883	ENSAMEG00000007372	FUBP1	99	82.883	Ailuropoda_melanoleuca
ENSEEUG00000001287	FUBP1	85	69.450	ENSACIG00000020024	fubp1	69	82.770	Amphilophus_citrinellus
ENSEEUG00000001287	FUBP1	86	70.265	ENSAPEG00000012232	fubp1	70	81.333	Amphiprion_percula
ENSEEUG00000001287	FUBP1	87	69.325	ENSATEG00000018619	fubp1	69	82.432	Anabas_testudineus
ENSEEUG00000001287	FUBP1	82	96.429	ENSAPLG00000005965	FUBP1	72	96.429	Anas_platyrhynchos
ENSEEUG00000001287	FUBP1	87	71.811	ENSACLG00000006708	fubp1	72	82.770	Astatotilapia_calliptera
ENSEEUG00000001287	FUBP1	74	67.698	ENSAMXG00000005525	fubp1	64	85.135	Astyanax_mexicanus
ENSEEUG00000001287	FUBP1	89	97.917	ENSCJAG00000007062	FUBP1	99	97.917	Callithrix_jacchus
ENSEEUG00000001287	FUBP1	98	85.848	ENSCAFG00000020361	FUBP1	91	97.959	Canis_familiaris
ENSEEUG00000001287	FUBP1	94	84.878	ENSTSYG00000000148	FUBP1	90	95.556	Carlito_syrichta
ENSEEUG00000001287	FUBP1	57	75.824	ENSCAPG00000011052	-	67	75.824	Cavia_aperea
ENSEEUG00000001287	FUBP1	100	85.258	ENSCPOG00000002757	FUBP1	100	97.987	Cavia_porcellus
ENSEEUG00000001287	FUBP1	100	66.185	ENSCCAG00000036537	FUBP1	100	97.917	Cebus_capucinus
ENSEEUG00000001287	FUBP1	100	85.649	ENSCATG00000042126	FUBP1	99	94.215	Cercocebus_atys
ENSEEUG00000001287	FUBP1	100	85.649	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSEEUG00000001287	FUBP1	98	85.692	ENSCSAG00000001402	FUBP1	99	85.692	Chlorocebus_sabaeus
ENSEEUG00000001287	FUBP1	100	85.649	ENSCHOG00000008177	FUBP1	100	85.649	Choloepus_hoffmanni
ENSEEUG00000001287	FUBP1	100	84.650	ENSCGRG00001007103	Fubp1	90	97.959	Cricetulus_griseus_chok1gshd
ENSEEUG00000001287	FUBP1	94	84.628	ENSCGRG00000003372	Fubp1	98	100.000	Cricetulus_griseus_crigri
ENSEEUG00000001287	FUBP1	87	67.762	ENSCSEG00000021412	fubp1	68	80.405	Cynoglossus_semilaevis
ENSEEUG00000001287	FUBP1	86	67.562	ENSCVAG00000014487	fubp1	71	82.432	Cyprinodon_variegatus
ENSEEUG00000001287	FUBP1	88	67.335	ENSDARG00000029248	fubp1	69	81.699	Danio_rerio
ENSEEUG00000001287	FUBP1	68	71.429	ENSDNOG00000034565	-	64	67.230	Dasypus_novemcinctus
ENSEEUG00000001287	FUBP1	89	97.619	ENSDORG00000016534	Fubp1	98	97.619	Dipodomys_ordii
ENSEEUG00000001287	FUBP1	68	100.000	ENSETEG00000000948	-	61	100.000	Echinops_telfairi
ENSEEUG00000001287	FUBP1	53	77.143	ENSEBUG00000016143	fubp1	59	70.270	Eptatretus_burgeri
ENSEEUG00000001287	FUBP1	87	66.935	ENSELUG00000007990	fubp1	73	80.556	Esox_lucius
ENSEEUG00000001287	FUBP1	90	89.583	ENSFALG00000005768	FUBP1	74	89.583	Ficedula_albicollis
ENSEEUG00000001287	FUBP1	100	85.649	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSEEUG00000001287	FUBP1	87	65.517	ENSFHEG00000005230	fubp1	72	82.432	Fundulus_heteroclitus
ENSEEUG00000001287	FUBP1	87	64.431	ENSGMOG00000003370	fubp1	68	73.826	Gadus_morhua
ENSEEUG00000001287	FUBP1	89	92.708	ENSGALG00000008939	FUBP1	71	94.828	Gallus_gallus
ENSEEUG00000001287	FUBP1	87	65.173	ENSGAFG00000020972	fubp1	74	84.452	Gambusia_affinis
ENSEEUG00000001287	FUBP1	88	68.889	ENSGACG00000016563	fubp1	68	82.550	Gasterosteus_aculeatus
ENSEEUG00000001287	FUBP1	87	68.102	ENSHBUG00000009835	fubp1	85	82.770	Haplochromis_burtoni
ENSEEUG00000001287	FUBP1	61	91.837	ENSHGLG00000002808	-	74	90.816	Heterocephalus_glaber_female
ENSEEUG00000001287	FUBP1	100	85.410	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSEEUG00000001287	FUBP1	100	85.410	ENSHGLG00100003417	-	90	100.000	Heterocephalus_glaber_male
ENSEEUG00000001287	FUBP1	61	92.131	ENSHGLG00100001414	-	74	90.816	Heterocephalus_glaber_male
ENSEEUG00000001287	FUBP1	87	69.168	ENSHCOG00000000910	fubp1	72	83.557	Hippocampus_comes
ENSEEUG00000001287	FUBP1	87	72.131	ENSIPUG00000009896	fubp1	73	84.899	Ictalurus_punctatus
ENSEEUG00000001287	FUBP1	89	97.917	ENSSTOG00000014312	FUBP1	99	97.917	Ictidomys_tridecemlineatus
ENSEEUG00000001287	FUBP1	89	97.917	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSEEUG00000001287	FUBP1	85	68.560	ENSKMAG00000018897	fubp1	72	82.770	Kryptolebias_marmoratus
ENSEEUG00000001287	FUBP1	87	67.206	ENSLBEG00000012700	fubp1	73	79.868	Labrus_bergylta
ENSEEUG00000001287	FUBP1	68	84.573	ENSLOCG00000003745	fubp1	66	88.571	Lepisosteus_oculatus
ENSEEUG00000001287	FUBP1	100	82.101	ENSLAFG00000003273	FUBP1	100	82.692	Loxodonta_africana
ENSEEUG00000001287	FUBP1	89	97.917	ENSMFAG00000031825	FUBP1	99	97.917	Macaca_fascicularis
ENSEEUG00000001287	FUBP1	89	97.917	ENSMMUG00000002899	FUBP1	96	97.917	Macaca_mulatta
ENSEEUG00000001287	FUBP1	100	85.649	ENSMNEG00000045212	FUBP1	99	94.215	Macaca_nemestrina
ENSEEUG00000001287	FUBP1	87	66.536	ENSMAMG00000007489	fubp1	74	83.108	Mastacembelus_armatus
ENSEEUG00000001287	FUBP1	87	71.869	ENSMZEG00005024298	fubp1	75	82.770	Maylandia_zebra
ENSEEUG00000001287	FUBP1	83	96.429	ENSMGAG00000009424	FUBP1	72	96.429	Meleagris_gallopavo
ENSEEUG00000001287	FUBP1	100	85.106	ENSMAUG00000016428	Fubp1	98	99.315	Mesocricetus_auratus
ENSEEUG00000001287	FUBP1	100	85.106	ENSMOCG00000014751	Fubp1	100	98.658	Microtus_ochrogaster
ENSEEUG00000001287	FUBP1	74	68.432	ENSMMOG00000019463	fubp1	64	81.081	Mola_mola
ENSEEUG00000001287	FUBP1	85	97.143	ENSMODG00000020804	FUBP1	99	97.143	Monodelphis_domestica
ENSEEUG00000001287	FUBP1	87	71.311	ENSMALG00000015173	fubp1	72	82.095	Monopterus_albus
ENSEEUG00000001287	FUBP1	100	85.191	MGP_CAROLIEiJ_G0025740	Fubp1	99	100.000	Mus_caroli
ENSEEUG00000001287	FUBP1	100	84.885	ENSMUSG00000028034	Fubp1	99	100.000	Mus_musculus
ENSEEUG00000001287	FUBP1	100	84.427	MGP_PahariEiJ_G0027191	Fubp1	99	100.000	Mus_pahari
ENSEEUG00000001287	FUBP1	100	85.038	MGP_SPRETEiJ_G0026693	Fubp1	99	100.000	Mus_spretus
ENSEEUG00000001287	FUBP1	69	81.590	ENSMLUG00000014802	FUBP1	79	97.959	Myotis_lucifugus
ENSEEUG00000001287	FUBP1	100	81.003	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSEEUG00000001287	FUBP1	86	69.815	ENSNBRG00000015099	fubp1	70	82.770	Neolamprologus_brichardi
ENSEEUG00000001287	FUBP1	89	97.917	ENSNLEG00000009772	FUBP1	99	97.917	Nomascus_leucogenys
ENSEEUG00000001287	FUBP1	79	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSEEUG00000001287	FUBP1	91	80.137	ENSOPRG00000001175	FUBP1	91	80.137	Ochotona_princeps
ENSEEUG00000001287	FUBP1	89	62.828	ENSODEG00000003657	-	86	71.809	Octodon_degus
ENSEEUG00000001287	FUBP1	100	85.802	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSEEUG00000001287	FUBP1	87	70.000	ENSONIG00000018381	fubp1	72	82.770	Oreochromis_niloticus
ENSEEUG00000001287	FUBP1	87	78.182	ENSOANG00000009777	FUBP1	77	95.876	Ornithorhynchus_anatinus
ENSEEUG00000001287	FUBP1	86	69.620	ENSORLG00000003540	fubp1	69	81.081	Oryzias_latipes
ENSEEUG00000001287	FUBP1	88	67.816	ENSORLG00020005908	fubp1	70	81.081	Oryzias_latipes_hni
ENSEEUG00000001287	FUBP1	88	67.816	ENSORLG00015008779	fubp1	69	81.081	Oryzias_latipes_hsok
ENSEEUG00000001287	FUBP1	87	67.816	ENSOMEG00000021943	fubp1	70	80.743	Oryzias_melastigma
ENSEEUG00000001287	FUBP1	89	94.045	ENSOGAG00000014233	FUBP1	62	97.959	Otolemur_garnettii
ENSEEUG00000001287	FUBP1	89	97.917	ENSOARG00000013259	FUBP1	91	97.959	Ovis_aries
ENSEEUG00000001287	FUBP1	100	85.954	ENSPPRG00000000413	FUBP1	100	85.954	Panthera_pardus
ENSEEUG00000001287	FUBP1	100	85.954	ENSPTIG00000019450	FUBP1	100	85.954	Panthera_tigris_altaica
ENSEEUG00000001287	FUBP1	84	89.300	ENSPSIG00000012965	FUBP1	56	100.000	Pelodiscus_sinensis
ENSEEUG00000001287	FUBP1	86	69.388	ENSPMGG00000009060	fubp1	58	67.500	Periophthalmus_magnuspinnatus
ENSEEUG00000001287	FUBP1	100	84.347	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSEEUG00000001287	FUBP1	87	73.529	ENSPFOG00000000238	fubp1	73	82.432	Poecilia_formosa
ENSEEUG00000001287	FUBP1	87	70.492	ENSPLAG00000021170	fubp1	71	83.784	Poecilia_latipinna
ENSEEUG00000001287	FUBP1	87	70.431	ENSPMEG00000004747	fubp1	72	82.432	Poecilia_mexicana
ENSEEUG00000001287	FUBP1	87	65.517	ENSPREG00000017911	fubp1	72	82.432	Poecilia_reticulata
ENSEEUG00000001287	FUBP1	61	99.671	ENSPPYG00000001219	-	69	99.671	Pongo_abelii
ENSEEUG00000001287	FUBP1	100	85.344	ENSPCAG00000012617	FUBP1	100	85.344	Procavia_capensis
ENSEEUG00000001287	FUBP1	89	98.795	ENSPCOG00000024974	FUBP1	98	98.795	Propithecus_coquereli
ENSEEUG00000001287	FUBP1	100	81.527	ENSPVAG00000014637	FUBP1	100	81.527	Pteropus_vampyrus
ENSEEUG00000001287	FUBP1	87	71.869	ENSPNYG00000004552	fubp1	75	82.770	Pundamilia_nyererei
ENSEEUG00000001287	FUBP1	87	67.366	ENSPNAG00000016207	fubp1	83	84.053	Pygocentrus_nattereri
ENSEEUG00000001287	FUBP1	89	94.057	ENSRNOG00000043370	Fubp1	60	100.000	Rattus_norvegicus
ENSEEUG00000001287	FUBP1	89	98.795	ENSRBIG00000042950	FUBP1	97	98.795	Rhinopithecus_bieti
ENSEEUG00000001287	FUBP1	89	98.795	ENSRROG00000043534	FUBP1	97	98.795	Rhinopithecus_roxellana
ENSEEUG00000001287	FUBP1	100	85.649	ENSSBOG00000027299	FUBP1	99	94.433	Saimiri_boliviensis_boliviensis
ENSEEUG00000001287	FUBP1	85	94.737	ENSSHAG00000005367	FUBP1	99	94.737	Sarcophilus_harrisii
ENSEEUG00000001287	FUBP1	74	89.655	ENSSFOG00015010213	fubp1	70	88.889	Scleropages_formosus
ENSEEUG00000001287	FUBP1	87	64.368	ENSSMAG00000012029	fubp1	69	80.464	Scophthalmus_maximus
ENSEEUG00000001287	FUBP1	87	71.516	ENSSDUG00000007383	fubp1	67	82.432	Seriola_dumerili
ENSEEUG00000001287	FUBP1	87	71.575	ENSSLDG00000022863	fubp1	78	82.432	Seriola_lalandi_dorsalis
ENSEEUG00000001287	FUBP1	100	80.208	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSEEUG00000001287	FUBP1	89	87.500	ENSSPUG00000008389	FUBP1	96	86.008	Sphenodon_punctatus
ENSEEUG00000001287	FUBP1	86	71.516	ENSSPAG00000010161	fubp1	73	82.432	Stegastes_partitus
ENSEEUG00000001287	FUBP1	82	94.643	ENSTGUG00000006841	FUBP1	71	94.643	Taeniopygia_guttata
ENSEEUG00000001287	FUBP1	84	73.438	ENSTRUG00000004615	fubp1	70	80.405	Takifugu_rubripes
ENSEEUG00000001287	FUBP1	69	100.000	ENSTBEG00000017333	FUBP1	54	100.000	Tupaia_belangeri
ENSEEUG00000001287	FUBP1	100	85.802	ENSTTRG00000000096	FUBP1	100	85.802	Tursiops_truncatus
ENSEEUG00000001287	FUBP1	99	85.846	ENSVPAG00000004709	FUBP1	100	85.846	Vicugna_pacos
ENSEEUG00000001287	FUBP1	87	66.803	ENSXCOG00000019354	fubp1	70	82.432	Xiphophorus_couchianus
ENSEEUG00000001287	FUBP1	84	68.884	ENSXMAG00000007168	fubp1	72	82.432	Xiphophorus_maculatus