EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000001511 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 30926 bases
Position: chrGeneScaffold_1424:67818-98743
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000001370	SRP54	PF00448.22	1.8e-49	1	2
ENSEEUP00000001370	SRP54	PF00448.22	1.8e-49	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000001514	SRP54-201	1512	-	ENSEEUP00000001370	503 (aa)	-	UPI0000F633E2

Gene Model

Click here to download ENSEEUG00000001511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000001511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000001511	SRP54	100	83.333	ENSG00000100883	SRP54	100	87.955	Homo_sapiens
ENSEEUG00000001511	SRP54	100	80.159	ENSAPOG00000011314	srp54	100	80.159	Acanthochromis_polyacanthus
ENSEEUG00000001511	SRP54	100	83.333	ENSAMEG00000015544	SRP54	100	83.333	Ailuropoda_melanoleuca
ENSEEUG00000001511	SRP54	89	77.060	ENSACIG00000022831	srp54	97	77.060	Amphilophus_citrinellus
ENSEEUG00000001511	SRP54	100	80.159	ENSAOCG00000019401	srp54	100	80.159	Amphiprion_ocellaris
ENSEEUG00000001511	SRP54	100	80.159	ENSAPEG00000001977	srp54	100	80.159	Amphiprion_percula
ENSEEUG00000001511	SRP54	100	80.357	ENSATEG00000013877	srp54	100	80.357	Anabas_testudineus
ENSEEUG00000001511	SRP54	94	81.435	ENSAPLG00000010125	SRP54	95	81.435	Anas_platyrhynchos
ENSEEUG00000001511	SRP54	86	83.410	ENSACAG00000010631	-	100	83.410	Anolis_carolinensis
ENSEEUG00000001511	SRP54	100	81.944	ENSACAG00000002103	-	100	81.944	Anolis_carolinensis
ENSEEUG00000001511	SRP54	65	70.091	ENSACAG00000001124	-	100	70.091	Anolis_carolinensis
ENSEEUG00000001511	SRP54	100	83.333	ENSANAG00000022133	SRP54	100	83.333	Aotus_nancymaae
ENSEEUG00000001511	SRP54	100	80.357	ENSACLG00000015866	srp54	100	80.357	Astatotilapia_calliptera
ENSEEUG00000001511	SRP54	100	79.762	ENSAMXG00000032669	SRP54	100	79.762	Astyanax_mexicanus
ENSEEUG00000001511	SRP54	100	83.333	ENSBTAG00000019085	SRP54	100	83.333	Bos_taurus
ENSEEUG00000001511	SRP54	98	59.036	WBGene00009012	F21D5.7	100	59.036	Caenorhabditis_elegans
ENSEEUG00000001511	SRP54	100	83.333	ENSCJAG00000006581	SRP54	98	88.143	Callithrix_jacchus
ENSEEUG00000001511	SRP54	100	83.333	ENSCAFG00000013331	SRP54	100	83.333	Canis_familiaris
ENSEEUG00000001511	SRP54	100	83.333	ENSCAFG00020023427	SRP54	100	83.333	Canis_lupus_dingo
ENSEEUG00000001511	SRP54	100	83.333	ENSCHIG00000026345	SRP54	100	83.333	Capra_hircus
ENSEEUG00000001511	SRP54	95	71.339	ENSTSYG00000035333	-	94	71.339	Carlito_syrichta
ENSEEUG00000001511	SRP54	100	83.532	ENSTSYG00000002680	-	98	88.367	Carlito_syrichta
ENSEEUG00000001511	SRP54	79	67.453	ENSCAPG00000008780	SRP54	80	67.453	Cavia_aperea
ENSEEUG00000001511	SRP54	100	82.937	ENSCPOG00000003691	SRP54	100	82.937	Cavia_porcellus
ENSEEUG00000001511	SRP54	88	100.000	ENSCCAG00000024179	SRP54	100	100.000	Cebus_capucinus
ENSEEUG00000001511	SRP54	100	83.333	ENSCATG00000034083	SRP54	98	88.143	Cercocebus_atys
ENSEEUG00000001511	SRP54	100	83.333	ENSCLAG00000015076	SRP54	100	83.333	Chinchilla_lanigera
ENSEEUG00000001511	SRP54	100	83.333	ENSCSAG00000015575	SRP54	100	83.333	Chlorocebus_sabaeus
ENSEEUG00000001511	SRP54	95	70.686	ENSCHOG00000008986	SRP54	100	70.686	Choloepus_hoffmanni
ENSEEUG00000001511	SRP54	100	82.540	ENSCPBG00000026195	SRP54	100	82.540	Chrysemys_picta_bellii
ENSEEUG00000001511	SRP54	100	68.651	ENSCING00000007380	-	100	68.651	Ciona_intestinalis
ENSEEUG00000001511	SRP54	100	83.333	ENSCANG00000028532	SRP54	98	88.143	Colobus_angolensis_palliatus
ENSEEUG00000001511	SRP54	100	83.333	ENSCGRG00001009525	-	100	83.333	Cricetulus_griseus_chok1gshd
ENSEEUG00000001511	SRP54	76	78.182	ENSCGRG00000009453	-	89	78.182	Cricetulus_griseus_crigri
ENSEEUG00000001511	SRP54	100	79.563	ENSCSEG00000012392	srp54	100	79.563	Cynoglossus_semilaevis
ENSEEUG00000001511	SRP54	100	79.960	ENSCVAG00000010395	srp54	100	79.960	Cyprinodon_variegatus
ENSEEUG00000001511	SRP54	100	79.960	ENSDARG00000098367	srp54	100	79.960	Danio_rerio
ENSEEUG00000001511	SRP54	100	83.333	ENSDNOG00000032525	SRP54	100	83.333	Dasypus_novemcinctus
ENSEEUG00000001511	SRP54	89	66.741	ENSDORG00000005159	-	97	66.741	Dipodomys_ordii
ENSEEUG00000001511	SRP54	96	63.711	FBgn0010747	Srp54k	98	63.655	Drosophila_melanogaster
ENSEEUG00000001511	SRP54	83	50.718	ENSETEG00000012102	-	99	50.718	Echinops_telfairi
ENSEEUG00000001511	SRP54	100	82.143	ENSETEG00000016307	-	100	82.143	Echinops_telfairi
ENSEEUG00000001511	SRP54	100	73.016	ENSEBUG00000009437	-	100	73.016	Eptatretus_burgeri
ENSEEUG00000001511	SRP54	100	83.333	ENSEASG00005002057	SRP54	100	83.333	Equus_asinus_asinus
ENSEEUG00000001511	SRP54	99	82.932	ENSECAG00000018042	SRP54	98	82.932	Equus_caballus
ENSEEUG00000001511	SRP54	100	79.563	ENSELUG00000003395	srp54	100	79.563	Esox_lucius
ENSEEUG00000001511	SRP54	100	83.135	ENSFCAG00000032033	SRP54	100	83.135	Felis_catus
ENSEEUG00000001511	SRP54	100	82.540	ENSFALG00000005995	SRP54	100	82.540	Ficedula_albicollis
ENSEEUG00000001511	SRP54	100	83.333	ENSFDAG00000016767	SRP54	100	83.333	Fukomys_damarensis
ENSEEUG00000001511	SRP54	100	79.762	ENSFHEG00000004263	srp54	100	79.762	Fundulus_heteroclitus
ENSEEUG00000001511	SRP54	74	94.615	ENSGMOG00000011391	srp54	78	94.615	Gadus_morhua
ENSEEUG00000001511	SRP54	100	82.540	ENSGALG00000023135	SRP54	100	82.540	Gallus_gallus
ENSEEUG00000001511	SRP54	100	80.159	ENSGAFG00000011586	srp54	100	80.159	Gambusia_affinis
ENSEEUG00000001511	SRP54	100	79.563	ENSGACG00000004181	srp54	100	79.563	Gasterosteus_aculeatus
ENSEEUG00000001511	SRP54	100	82.540	ENSGAGG00000014766	SRP54	100	82.540	Gopherus_agassizii
ENSEEUG00000001511	SRP54	100	83.333	ENSGGOG00000002926	SRP54	98	88.143	Gorilla_gorilla
ENSEEUG00000001511	SRP54	100	80.357	ENSHBUG00000005678	srp54	100	80.357	Haplochromis_burtoni
ENSEEUG00000001511	SRP54	100	83.333	ENSHGLG00000002850	SRP54	100	83.333	Heterocephalus_glaber_female
ENSEEUG00000001511	SRP54	86	75.877	ENSHGLG00100007281	-	92	75.877	Heterocephalus_glaber_male
ENSEEUG00000001511	SRP54	100	83.333	ENSHGLG00100005263	SRP54	100	83.333	Heterocephalus_glaber_male
ENSEEUG00000001511	SRP54	100	78.571	ENSHCOG00000021127	srp54	100	78.571	Hippocampus_comes
ENSEEUG00000001511	SRP54	100	79.167	ENSIPUG00000001420	srp54	100	79.167	Ictalurus_punctatus
ENSEEUG00000001511	SRP54	100	83.333	ENSSTOG00000016023	SRP54	100	83.333	Ictidomys_tridecemlineatus
ENSEEUG00000001511	SRP54	100	78.175	ENSJJAG00000013417	-	100	78.175	Jaculus_jaculus
ENSEEUG00000001511	SRP54	87	66.136	ENSJJAG00000016404	-	100	66.136	Jaculus_jaculus
ENSEEUG00000001511	SRP54	100	80.159	ENSKMAG00000007707	srp54	100	80.159	Kryptolebias_marmoratus
ENSEEUG00000001511	SRP54	100	80.159	ENSLBEG00000021122	srp54	100	80.159	Labrus_bergylta
ENSEEUG00000001511	SRP54	100	80.159	ENSLBEG00000018690	srp54	100	80.159	Labrus_bergylta
ENSEEUG00000001511	SRP54	100	80.159	ENSLACG00000017890	SRP54	100	80.159	Latimeria_chalumnae
ENSEEUG00000001511	SRP54	100	80.754	ENSLOCG00000009440	srp54	100	80.754	Lepisosteus_oculatus
ENSEEUG00000001511	SRP54	100	83.333	ENSLAFG00000012007	SRP54	100	83.333	Loxodonta_africana
ENSEEUG00000001511	SRP54	100	83.333	ENSMFAG00000044371	SRP54	98	88.143	Macaca_fascicularis
ENSEEUG00000001511	SRP54	100	83.333	ENSMMUG00000015073	FAM177A1	98	88.143	Macaca_mulatta
ENSEEUG00000001511	SRP54	100	83.333	ENSMNEG00000006947	SRP54	98	88.143	Macaca_nemestrina
ENSEEUG00000001511	SRP54	100	83.333	ENSMLEG00000042251	SRP54	98	88.143	Mandrillus_leucophaeus
ENSEEUG00000001511	SRP54	100	80.357	ENSMAMG00000004803	srp54	100	80.357	Mastacembelus_armatus
ENSEEUG00000001511	SRP54	100	80.357	ENSMZEG00005027528	srp54	100	80.357	Maylandia_zebra
ENSEEUG00000001511	SRP54	100	77.866	ENSMGAG00000012481	SRP54	100	77.866	Meleagris_gallopavo
ENSEEUG00000001511	SRP54	100	83.532	ENSMAUG00000014447	-	100	83.532	Mesocricetus_auratus
ENSEEUG00000001511	SRP54	100	83.333	ENSMICG00000010270	SRP54	100	83.333	Microcebus_murinus
ENSEEUG00000001511	SRP54	87	88.182	ENSMOCG00000000948	-	100	88.182	Microtus_ochrogaster
ENSEEUG00000001511	SRP54	89	76.510	ENSMMOG00000020303	srp54	98	76.510	Mola_mola
ENSEEUG00000001511	SRP54	100	83.135	ENSMODG00000023150	-	100	83.135	Monodelphis_domestica
ENSEEUG00000001511	SRP54	100	83.135	ENSMODG00000012925	-	100	83.135	Monodelphis_domestica
ENSEEUG00000001511	SRP54	88	78.104	ENSMALG00000009163	srp54	98	78.104	Monopterus_albus
ENSEEUG00000001511	SRP54	100	83.532	MGP_CAROLIEiJ_G0017754	-	100	83.532	Mus_caroli
ENSEEUG00000001511	SRP54	100	83.532	ENSMUSG00000112449	Srp54b	100	83.532	Mus_musculus
ENSEEUG00000001511	SRP54	100	83.532	ENSMUSG00000073079	Srp54a	100	83.532	Mus_musculus
ENSEEUG00000001511	SRP54	100	82.738	ENSMUSG00000079108	Srp54c	100	82.738	Mus_musculus
ENSEEUG00000001511	SRP54	100	83.532	MGP_PahariEiJ_G0029510	-	100	83.532	Mus_pahari
ENSEEUG00000001511	SRP54	100	83.333	ENSMPUG00000016302	SRP54	100	83.333	Mustela_putorius_furo
ENSEEUG00000001511	SRP54	100	82.738	ENSMLUG00000008958	SRP54	100	82.738	Myotis_lucifugus
ENSEEUG00000001511	SRP54	80	100.000	ENSNGAG00000019806	-	89	100.000	Nannospalax_galili
ENSEEUG00000001511	SRP54	87	84.545	ENSNBRG00000006000	srp54	100	84.545	Neolamprologus_brichardi
ENSEEUG00000001511	SRP54	100	83.333	ENSNLEG00000003496	SRP54	98	88.143	Nomascus_leucogenys
ENSEEUG00000001511	SRP54	61	100.000	ENSMEUG00000000138	-	69	100.000	Notamacropus_eugenii
ENSEEUG00000001511	SRP54	57	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSEEUG00000001511	SRP54	100	83.333	ENSODEG00000004865	SRP54	100	83.333	Octodon_degus
ENSEEUG00000001511	SRP54	100	80.357	ENSONIG00000011768	srp54	100	80.357	Oreochromis_niloticus
ENSEEUG00000001511	SRP54	100	83.333	ENSOANG00000014051	SRP54	100	83.333	Ornithorhynchus_anatinus
ENSEEUG00000001511	SRP54	100	82.738	ENSOCUG00000007838	SRP54	100	82.738	Oryctolagus_cuniculus
ENSEEUG00000001511	SRP54	100	80.159	ENSORLG00000010027	srp54	100	80.159	Oryzias_latipes
ENSEEUG00000001511	SRP54	100	80.159	ENSORLG00020001878	srp54	100	80.159	Oryzias_latipes_hni
ENSEEUG00000001511	SRP54	100	80.159	ENSORLG00015021866	srp54	100	80.159	Oryzias_latipes_hsok
ENSEEUG00000001511	SRP54	100	79.960	ENSOMEG00000020952	srp54	100	79.960	Oryzias_melastigma
ENSEEUG00000001511	SRP54	100	83.333	ENSOGAG00000012188	SRP54	100	83.333	Otolemur_garnettii
ENSEEUG00000001511	SRP54	100	83.333	ENSOARG00000007160	SRP54	100	83.333	Ovis_aries
ENSEEUG00000001511	SRP54	100	83.333	ENSPPAG00000017434	SRP54	98	88.143	Pan_paniscus
ENSEEUG00000001511	SRP54	100	83.135	ENSPPRG00000014047	SRP54	98	87.919	Panthera_pardus
ENSEEUG00000001511	SRP54	100	83.135	ENSPTIG00000000744	SRP54	96	83.135	Panthera_tigris_altaica
ENSEEUG00000001511	SRP54	100	83.333	ENSPTRG00000006259	FAM177A1	98	88.143	Pan_troglodytes
ENSEEUG00000001511	SRP54	100	83.333	ENSPANG00000023853	SRP54	98	88.143	Papio_anubis
ENSEEUG00000001511	SRP54	100	79.762	ENSPKIG00000001953	srp54	100	79.762	Paramormyrops_kingsleyae
ENSEEUG00000001511	SRP54	100	82.341	ENSPSIG00000006476	SRP54	100	82.341	Pelodiscus_sinensis
ENSEEUG00000001511	SRP54	91	75.652	ENSPMGG00000004127	srp54	99	75.652	Periophthalmus_magnuspinnatus
ENSEEUG00000001511	SRP54	100	70.635	ENSPEMG00000019634	-	100	70.635	Peromyscus_maniculatus_bairdii
ENSEEUG00000001511	SRP54	100	74.008	ENSPMAG00000006078	-	100	74.008	Petromyzon_marinus
ENSEEUG00000001511	SRP54	100	83.135	ENSPCIG00000016175	SRP54	100	83.135	Phascolarctos_cinereus
ENSEEUG00000001511	SRP54	100	80.159	ENSPFOG00000008870	srp54	100	80.159	Poecilia_formosa
ENSEEUG00000001511	SRP54	100	80.159	ENSPLAG00000009889	srp54	100	80.159	Poecilia_latipinna
ENSEEUG00000001511	SRP54	100	80.159	ENSPMEG00000008601	srp54	100	80.159	Poecilia_mexicana
ENSEEUG00000001511	SRP54	100	80.159	ENSPREG00000004505	srp54	100	80.159	Poecilia_reticulata
ENSEEUG00000001511	SRP54	100	78.373	ENSPPYG00000005739	SRP54	100	78.373	Pongo_abelii
ENSEEUG00000001511	SRP54	100	79.365	ENSPCAG00000006268	SRP54	100	79.365	Procavia_capensis
ENSEEUG00000001511	SRP54	100	81.386	ENSPCOG00000022473	SRP54	100	81.386	Propithecus_coquereli
ENSEEUG00000001511	SRP54	63	76.682	ENSPVAG00000010056	SRP54	82	76.682	Pteropus_vampyrus
ENSEEUG00000001511	SRP54	100	80.357	ENSPNYG00000009717	srp54	100	80.357	Pundamilia_nyererei
ENSEEUG00000001511	SRP54	100	79.960	ENSPNAG00000008544	srp54	100	79.960	Pygocentrus_nattereri
ENSEEUG00000001511	SRP54	100	83.730	ENSRNOG00000032776	Srp54a	100	83.730	Rattus_norvegicus
ENSEEUG00000001511	SRP54	100	83.333	ENSRROG00000041292	SRP54	98	88.143	Rhinopithecus_roxellana
ENSEEUG00000001511	SRP54	86	42.857	YPR088C	SRP54	95	39.655	Saccharomyces_cerevisiae
ENSEEUG00000001511	SRP54	89	88.143	ENSSBOG00000035145	SRP54	94	88.143	Saimiri_boliviensis_boliviensis
ENSEEUG00000001511	SRP54	68	84.840	ENSSHAG00000000671	SRP54	100	84.840	Sarcophilus_harrisii
ENSEEUG00000001511	SRP54	100	80.357	ENSSFOG00015013920	srp54	100	80.357	Scleropages_formosus
ENSEEUG00000001511	SRP54	100	75.281	ENSSMAG00000002441	srp54	100	75.281	Scophthalmus_maximus
ENSEEUG00000001511	SRP54	100	79.960	ENSSDUG00000018586	srp54	100	79.960	Seriola_dumerili
ENSEEUG00000001511	SRP54	100	79.762	ENSSLDG00000010476	srp54	100	79.762	Seriola_lalandi_dorsalis
ENSEEUG00000001511	SRP54	100	83.333	ENSSARG00000002744	SRP54	100	83.333	Sorex_araneus
ENSEEUG00000001511	SRP54	100	82.540	ENSSPUG00000013101	SRP54	100	82.540	Sphenodon_punctatus
ENSEEUG00000001511	SRP54	100	80.159	ENSSPAG00000002354	srp54	100	80.159	Stegastes_partitus
ENSEEUG00000001511	SRP54	100	83.333	ENSSSCG00000001955	SRP54	100	83.333	Sus_scrofa
ENSEEUG00000001511	SRP54	94	81.435	ENSTGUG00000011945	-	95	81.435	Taeniopygia_guttata
ENSEEUG00000001511	SRP54	100	79.365	ENSTRUG00000007057	srp54	100	79.365	Takifugu_rubripes
ENSEEUG00000001511	SRP54	100	78.968	ENSTNIG00000002589	srp54	100	78.968	Tetraodon_nigroviridis
ENSEEUG00000001511	SRP54	89	79.642	ENSTBEG00000011409	SRP54	100	79.642	Tupaia_belangeri
ENSEEUG00000001511	SRP54	80	100.000	ENSTTRG00000000928	SRP54	80	100.000	Tursiops_truncatus
ENSEEUG00000001511	SRP54	100	83.333	ENSUMAG00000011234	SRP54	100	83.333	Ursus_maritimus
ENSEEUG00000001511	SRP54	94	82.068	ENSVPAG00000005668	SRP54	100	82.068	Vicugna_pacos
ENSEEUG00000001511	SRP54	100	83.333	ENSVVUG00000019962	SRP54	100	83.333	Vulpes_vulpes
ENSEEUG00000001511	SRP54	83	96.172	ENSXETG00000012290	srp54	85	96.172	Xenopus_tropicalis
ENSEEUG00000001511	SRP54	88	77.878	ENSXCOG00000004658	srp54	96	77.878	Xiphophorus_couchianus
ENSEEUG00000001511	SRP54	100	80.159	ENSXMAG00000018315	srp54	100	80.159	Xiphophorus_maculatus