EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000001732 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 768 bases
Position: chrscaffold_162270:51-818
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000001574	SURF6	PF04935.12	6.5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000001729	-	651	-	ENSEEUP00000001574	217 (aa)	-	UPI0000F60D93

Gene Model

Click here to download ENSEEUG00000001732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000001732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000001732	-	100	90.498	ENSEEUG00000011071	-	78	94.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000001732	-	83	73.370	ENSG00000148296	SURF6	51	78.261	Homo_sapiens
ENSEEUG00000001732	-	82	74.457	ENSAMEG00000011733	SURF6	61	74.667	Ailuropoda_melanoleuca
ENSEEUG00000001732	-	80	49.727	ENSATEG00000012640	surf6	51	49.727	Anabas_testudineus
ENSEEUG00000001732	-	80	56.250	ENSAPLG00000005069	SURF6	54	58.523	Anas_platyrhynchos
ENSEEUG00000001732	-	100	73.661	ENSANAG00000021046	SURF6	63	76.786	Aotus_nancymaae
ENSEEUG00000001732	-	88	49.231	ENSACLG00000027819	surf6	53	50.000	Astatotilapia_calliptera
ENSEEUG00000001732	-	100	79.646	ENSBTAG00000011554	SURF6	64	79.646	Bos_taurus
ENSEEUG00000001732	-	77	76.471	ENSCJAG00000017951	SURF6	54	76.720	Callithrix_jacchus
ENSEEUG00000001732	-	75	80.723	ENSCAFG00000019758	-	54	75.258	Canis_familiaris
ENSEEUG00000001732	-	75	71.084	ENSCAFG00000005159	-	50	68.852	Canis_familiaris
ENSEEUG00000001732	-	75	80.723	ENSCAFG00020001156	SURF6	55	75.258	Canis_lupus_dingo
ENSEEUG00000001732	-	100	80.973	ENSCHIG00000025220	SURF6	64	80.973	Capra_hircus
ENSEEUG00000001732	-	100	76.549	ENSTSYG00000008431	SURF6	63	76.549	Carlito_syrichta
ENSEEUG00000001732	-	100	70.815	ENSCAPG00000010696	SURF6	51	79.518	Cavia_aperea
ENSEEUG00000001732	-	82	73.626	ENSCCAG00000025688	SURF6	82	77.249	Cebus_capucinus
ENSEEUG00000001732	-	83	74.457	ENSCATG00000042004	SURF6	63	76.419	Cercocebus_atys
ENSEEUG00000001732	-	81	74.157	ENSCSAG00000015203	-	51	78.261	Chlorocebus_sabaeus
ENSEEUG00000001732	-	81	72.472	ENSCSAG00000018888	-	51	76.630	Chlorocebus_sabaeus
ENSEEUG00000001732	-	100	60.262	ENSCPBG00000021169	SURF6	63	61.404	Chrysemys_picta_bellii
ENSEEUG00000001732	-	72	76.250	ENSCANG00000035022	SURF6	84	81.875	Colobus_angolensis_palliatus
ENSEEUG00000001732	-	100	75.546	ENSCGRG00000017035	Surf6	64	76.106	Cricetulus_griseus_crigri
ENSEEUG00000001732	-	100	49.345	ENSCSEG00000015172	surf6	52	48.634	Cynoglossus_semilaevis
ENSEEUG00000001732	-	100	49.561	ENSCVAG00000015730	surf6	54	49.425	Cyprinodon_variegatus
ENSEEUG00000001732	-	100	75.664	ENSDNOG00000049519	SURF6	51	76.344	Dasypus_novemcinctus
ENSEEUG00000001732	-	100	75.109	ENSDORG00000010761	Surf6	65	76.106	Dipodomys_ordii
ENSEEUG00000001732	-	99	66.960	ENSETEG00000004239	SURF6	69	70.175	Echinops_telfairi
ENSEEUG00000001732	-	76	42.353	ENSEBUG00000001547	surf6	50	42.353	Eptatretus_burgeri
ENSEEUG00000001732	-	77	78.947	ENSEASG00005009885	SURF6	53	82.796	Equus_asinus_asinus
ENSEEUG00000001732	-	81	78.212	ENSECAG00000021229	SURF6	52	82.258	Equus_caballus
ENSEEUG00000001732	-	75	80.120	ENSFCAG00000040914	SURF6	53	77.005	Felis_catus
ENSEEUG00000001732	-	99	57.658	ENSFALG00000001495	SURF6	52	58.289	Ficedula_albicollis
ENSEEUG00000001732	-	99	72.000	ENSFDAG00000007052	SURF6	71	72.000	Fukomys_damarensis
ENSEEUG00000001732	-	80	47.486	ENSFHEG00000002290	surf6	50	49.432	Fundulus_heteroclitus
ENSEEUG00000001732	-	99	56.109	ENSGALG00000038413	SURF6	52	55.319	Gallus_gallus
ENSEEUG00000001732	-	80	50.568	ENSGAFG00000013618	surf6	50	50.568	Gambusia_affinis
ENSEEUG00000001732	-	100	59.825	ENSGAGG00000010286	SURF6	61	60.965	Gopherus_agassizii
ENSEEUG00000001732	-	83	73.370	ENSGGOG00000014426	SURF6	51	78.261	Gorilla_gorilla
ENSEEUG00000001732	-	88	49.231	ENSHBUG00000008764	surf6	53	50.000	Haplochromis_burtoni
ENSEEUG00000001732	-	100	71.616	ENSHGLG00000013027	SURF6	64	71.053	Heterocephalus_glaber_female
ENSEEUG00000001732	-	100	71.616	ENSHGLG00100015654	SURF6	58	71.053	Heterocephalus_glaber_male
ENSEEUG00000001732	-	100	48.498	ENSHCOG00000001639	surf6	57	46.193	Hippocampus_comes
ENSEEUG00000001732	-	76	79.042	ENSJJAG00000016287	Surf6	63	74.890	Jaculus_jaculus
ENSEEUG00000001732	-	85	44.920	ENSLBEG00000024311	surf6	52	47.283	Labrus_bergylta
ENSEEUG00000001732	-	72	57.862	ENSLACG00000013322	SURF6	53	53.804	Latimeria_chalumnae
ENSEEUG00000001732	-	81	75.978	ENSLAFG00000026419	SURF6	64	74.449	Loxodonta_africana
ENSEEUG00000001732	-	65	75.524	ENSMFAG00000033030	SURF6	99	67.188	Macaca_fascicularis
ENSEEUG00000001732	-	80	75.000	ENSMMUG00000022339	-	68	75.983	Macaca_mulatta
ENSEEUG00000001732	-	80	75.000	ENSMNEG00000033787	SURF6	51	78.804	Macaca_nemestrina
ENSEEUG00000001732	-	81	75.843	ENSMLEG00000028750	SURF6	51	79.891	Mandrillus_leucophaeus
ENSEEUG00000001732	-	80	48.370	ENSMAMG00000018269	surf6	53	47.059	Mastacembelus_armatus
ENSEEUG00000001732	-	88	49.231	ENSMZEG00005003188	surf6	53	50.000	Maylandia_zebra
ENSEEUG00000001732	-	99	55.656	ENSMGAG00000006371	SURF6	52	54.787	Meleagris_gallopavo
ENSEEUG00000001732	-	100	76.419	ENSMAUG00000020676	Surf6	63	76.991	Mesocricetus_auratus
ENSEEUG00000001732	-	82	76.111	ENSMICG00000046077	SURF6	63	75.556	Microcebus_murinus
ENSEEUG00000001732	-	100	75.221	ENSMOCG00000011956	Surf6	63	75.221	Microtus_ochrogaster
ENSEEUG00000001732	-	80	68.182	ENSMODG00000012744	SURF6	63	69.027	Monodelphis_domestica
ENSEEUG00000001732	-	81	49.162	ENSMALG00000012310	surf6	50	48.901	Monopterus_albus
ENSEEUG00000001732	-	100	73.778	MGP_CAROLIEiJ_G0023325	Surf6	63	73.778	Mus_caroli
ENSEEUG00000001732	-	100	74.222	ENSMUSG00000036160	Surf6	63	74.222	Mus_musculus
ENSEEUG00000001732	-	100	75.446	MGP_PahariEiJ_G0024782	Surf6	63	75.446	Mus_pahari
ENSEEUG00000001732	-	100	73.778	MGP_SPRETEiJ_G0024242	Surf6	63	73.778	Mus_spretus
ENSEEUG00000001732	-	80	73.743	ENSMPUG00000012416	SURF6	51	72.959	Mustela_putorius_furo
ENSEEUG00000001732	-	80	78.409	ENSNGAG00000015358	Surf6	63	75.111	Nannospalax_galili
ENSEEUG00000001732	-	87	50.000	ENSNBRG00000007805	surf6	52	50.811	Neolamprologus_brichardi
ENSEEUG00000001732	-	83	65.761	ENSNLEG00000013079	SURF6	51	70.652	Nomascus_leucogenys
ENSEEUG00000001732	-	100	53.275	ENSMEUG00000006545	-	54	52.332	Notamacropus_eugenii
ENSEEUG00000001732	-	81	75.843	ENSOPRG00000000430	-	81	74.457	Ochotona_princeps
ENSEEUG00000001732	-	100	70.306	ENSODEG00000015789	SURF6	66	70.306	Octodon_degus
ENSEEUG00000001732	-	85	48.936	ENSONIG00000011294	surf6	51	49.189	Oreochromis_niloticus
ENSEEUG00000001732	-	76	79.641	ENSOGAG00000027199	SURF6	64	76.233	Otolemur_garnettii
ENSEEUG00000001732	-	68	78.431	ENSOARG00000003711	SURF6	56	81.046	Ovis_aries
ENSEEUG00000001732	-	80	75.568	ENSPPAG00000032305	SURF6	51	78.261	Pan_paniscus
ENSEEUG00000001732	-	84	75.135	ENSPPRG00000003090	SURF6	52	75.135	Panthera_pardus
ENSEEUG00000001732	-	80	75.568	ENSPTRG00000021514	SURF6	54	78.261	Pan_troglodytes
ENSEEUG00000001732	-	81	75.281	ENSPANG00000026036	SURF6	51	79.348	Papio_anubis
ENSEEUG00000001732	-	100	61.842	ENSPSIG00000011771	SURF6	63	62.389	Pelodiscus_sinensis
ENSEEUG00000001732	-	75	48.193	ENSPMGG00000004798	surf6	59	50.568	Periophthalmus_magnuspinnatus
ENSEEUG00000001732	-	79	79.310	ENSPEMG00000012589	Surf6	63	76.991	Peromyscus_maniculatus_bairdii
ENSEEUG00000001732	-	80	67.614	ENSPCIG00000017358	SURF6	54	65.979	Phascolarctos_cinereus
ENSEEUG00000001732	-	80	50.568	ENSPLAG00000021874	surf6	50	51.705	Poecilia_latipinna
ENSEEUG00000001732	-	80	50.568	ENSPMEG00000009276	surf6	50	51.705	Poecilia_mexicana
ENSEEUG00000001732	-	80	50.568	ENSPMEG00000009994	surf6	52	51.705	Poecilia_mexicana
ENSEEUG00000001732	-	80	51.136	ENSPREG00000021969	surf6	58	51.136	Poecilia_reticulata
ENSEEUG00000001732	-	81	75.281	ENSPPYG00000019728	SURF6	51	78.804	Pongo_abelii
ENSEEUG00000001732	-	67	69.178	ENSPCAG00000002906	SURF6	68	68.932	Procavia_capensis
ENSEEUG00000001732	-	82	76.667	ENSPCOG00000015707	SURF6	63	76.000	Propithecus_coquereli
ENSEEUG00000001732	-	75	73.494	ENSPVAG00000017042	SURF6	64	72.807	Pteropus_vampyrus
ENSEEUG00000001732	-	87	50.000	ENSPNYG00000003445	surf6	52	50.811	Pundamilia_nyererei
ENSEEUG00000001732	-	80	50.000	ENSPNAG00000006939	surf6	51	49.733	Pygocentrus_nattereri
ENSEEUG00000001732	-	100	73.451	ENSRNOG00000005031	Surf6	64	73.451	Rattus_norvegicus
ENSEEUG00000001732	-	81	75.281	ENSRBIG00000028268	SURF6	51	79.348	Rhinopithecus_bieti
ENSEEUG00000001732	-	81	75.281	ENSRROG00000012667	SURF6	51	79.348	Rhinopithecus_roxellana
ENSEEUG00000001732	-	81	70.225	ENSSBOG00000024264	-	52	65.957	Saimiri_boliviensis_boliviensis
ENSEEUG00000001732	-	80	68.182	ENSSHAG00000003742	SURF6	63	68.584	Sarcophilus_harrisii
ENSEEUG00000001732	-	80	51.366	ENSSMAG00000009846	surf6	52	51.366	Scophthalmus_maximus
ENSEEUG00000001732	-	78	51.366	ENSSDUG00000007947	surf6	51	51.366	Seriola_dumerili
ENSEEUG00000001732	-	78	50.820	ENSSLDG00000015027	surf6	51	50.820	Seriola_lalandi_dorsalis
ENSEEUG00000001732	-	74	62.577	ENSSPUG00000015954	SURF6	69	63.182	Sphenodon_punctatus
ENSEEUG00000001732	-	72	76.101	ENSSSCG00000032106	SURF6	64	74.336	Sus_scrofa
ENSEEUG00000001732	-	74	59.509	ENSTGUG00000005445	-	73	59.890	Taeniopygia_guttata
ENSEEUG00000001732	-	74	58.896	ENSTGUG00000005438	-	50	59.341	Taeniopygia_guttata
ENSEEUG00000001732	-	100	50.655	ENSTNIG00000007503	surf6	53	48.649	Tetraodon_nigroviridis
ENSEEUG00000001732	-	75	78.916	ENSUAMG00000014627	SURF6	61	76.682	Ursus_americanus
ENSEEUG00000001732	-	75	80.120	ENSVVUG00000027289	SURF6	54	74.742	Vulpes_vulpes
ENSEEUG00000001732	-	76	51.497	ENSXETG00000005018	surf6	56	50.000	Xenopus_tropicalis
ENSEEUG00000001732	-	80	51.705	ENSXCOG00000001322	surf6	52	51.705	Xiphophorus_couchianus
ENSEEUG00000001732	-	80	51.705	ENSXMAG00000024608	surf6	52	51.705	Xiphophorus_maculatus