EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000002024 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 36799 bases
Position: chrGeneScaffold_5918:4756-41554
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000001856	EST1	PF10374.9	3.8e-25	1	1
ENSEEUP00000001856	EST1_DNA_bind	PF10373.9	1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000002038	SMG7-201	3519	-	ENSEEUP00000001856	1172 (aa)	-	UPI0000F62272

Gene Model

Click here to download ENSEEUG00000002024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000002024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000002024	SMG7	99	93.793	ENSG00000116698	SMG7	100	96.693	Homo_sapiens
ENSEEUG00000002024	SMG7	66	71.957	ENSAPOG00000009611	smg7	89	71.957	Acanthochromis_polyacanthus
ENSEEUG00000002024	SMG7	91	93.237	ENSAMEG00000002357	SMG7	97	93.237	Ailuropoda_melanoleuca
ENSEEUG00000002024	SMG7	91	59.717	ENSACIG00000015152	smg7	95	63.388	Amphilophus_citrinellus
ENSEEUG00000002024	SMG7	94	64.007	ENSAOCG00000013538	smg7	97	64.261	Amphiprion_ocellaris
ENSEEUG00000002024	SMG7	94	63.868	ENSAPEG00000007851	smg7	97	64.122	Amphiprion_percula
ENSEEUG00000002024	SMG7	94	61.318	ENSATEG00000006931	smg7	96	61.695	Anabas_testudineus
ENSEEUG00000002024	SMG7	92	81.338	ENSAPLG00000015811	SMG7	95	81.514	Anas_platyrhynchos
ENSEEUG00000002024	SMG7	94	82.860	ENSACAG00000014989	SMG7	97	83.204	Anolis_carolinensis
ENSEEUG00000002024	SMG7	99	93.793	ENSANAG00000028114	SMG7	99	93.452	Aotus_nancymaae
ENSEEUG00000002024	SMG7	94	63.153	ENSACLG00000022079	smg7	97	63.853	Astatotilapia_calliptera
ENSEEUG00000002024	SMG7	94	65.315	ENSAMXG00000020809	smg7	97	65.603	Astyanax_mexicanus
ENSEEUG00000002024	SMG7	92	96.587	ENSBTAG00000008003	SMG7	93	96.587	Bos_taurus
ENSEEUG00000002024	SMG7	100	92.954	ENSCJAG00000005135	SMG7	100	92.954	Callithrix_jacchus
ENSEEUG00000002024	SMG7	92	97.325	ENSCAFG00000013276	SMG7	93	97.325	Canis_familiaris
ENSEEUG00000002024	SMG7	92	97.325	ENSCAFG00020015475	SMG7	93	97.325	Canis_lupus_dingo
ENSEEUG00000002024	SMG7	94	95.355	ENSCHIG00000018192	SMG7	96	95.355	Capra_hircus
ENSEEUG00000002024	SMG7	98	92.721	ENSTSYG00000002667	SMG7	98	92.721	Carlito_syrichta
ENSEEUG00000002024	SMG7	92	96.310	ENSCPOG00000008906	SMG7	95	96.310	Cavia_porcellus
ENSEEUG00000002024	SMG7	91	92.606	ENSCCAG00000028596	SMG7	97	92.606	Cebus_capucinus
ENSEEUG00000002024	SMG7	92	96.863	ENSCATG00000011063	SMG7	93	96.863	Cercocebus_atys
ENSEEUG00000002024	SMG7	94	94.842	ENSCLAG00000010751	SMG7	97	94.842	Chinchilla_lanigera
ENSEEUG00000002024	SMG7	92	96.679	ENSCSAG00000012654	SMG7	93	96.679	Chlorocebus_sabaeus
ENSEEUG00000002024	SMG7	95	85.855	ENSCHOG00000010522	SMG7	99	86.213	Choloepus_hoffmanni
ENSEEUG00000002024	SMG7	94	87.262	ENSCPBG00000015724	SMG7	97	87.088	Chrysemys_picta_bellii
ENSEEUG00000002024	SMG7	91	92.696	ENSCANG00000015680	SMG7	97	92.696	Colobus_angolensis_palliatus
ENSEEUG00000002024	SMG7	94	94.027	ENSCGRG00001013705	Smg7	97	94.208	Cricetulus_griseus_chok1gshd
ENSEEUG00000002024	SMG7	92	94.926	ENSCGRG00000018401	Smg7	94	95.111	Cricetulus_griseus_crigri
ENSEEUG00000002024	SMG7	92	62.093	ENSCVAG00000011842	smg7	96	64.417	Cyprinodon_variegatus
ENSEEUG00000002024	SMG7	94	65.266	ENSDARG00000060767	smg7	97	65.437	Danio_rerio
ENSEEUG00000002024	SMG7	94	94.480	ENSDORG00000007331	Smg7	97	94.480	Dipodomys_ordii
ENSEEUG00000002024	SMG7	94	94.932	ENSETEG00000002654	SMG7	100	94.932	Echinops_telfairi
ENSEEUG00000002024	SMG7	94	96.380	ENSEASG00005006524	SMG7	97	96.380	Equus_asinus_asinus
ENSEEUG00000002024	SMG7	94	96.471	ENSECAG00000004313	SMG7	97	96.471	Equus_caballus
ENSEEUG00000002024	SMG7	86	76.912	ENSELUG00000010293	smg7	99	63.976	Esox_lucius
ENSEEUG00000002024	SMG7	99	92.973	ENSFCAG00000010900	SMG7	97	96.199	Felis_catus
ENSEEUG00000002024	SMG7	92	82.058	ENSFALG00000003047	SMG7	96	82.322	Ficedula_albicollis
ENSEEUG00000002024	SMG7	92	95.941	ENSFDAG00000012121	SMG7	95	95.941	Fukomys_damarensis
ENSEEUG00000002024	SMG7	94	59.281	ENSFHEG00000011073	smg7	96	59.829	Fundulus_heteroclitus
ENSEEUG00000002024	SMG7	86	66.861	ENSGMOG00000004916	smg7	92	66.861	Gadus_morhua
ENSEEUG00000002024	SMG7	94	80.484	ENSGALG00000004667	SMG7	97	80.656	Gallus_gallus
ENSEEUG00000002024	SMG7	94	59.212	ENSGAFG00000019000	smg7	96	59.107	Gambusia_affinis
ENSEEUG00000002024	SMG7	94	64.085	ENSGACG00000001634	smg7	99	64.292	Gasterosteus_aculeatus
ENSEEUG00000002024	SMG7	92	96.679	ENSGGOG00000002342	SMG7	93	96.679	Gorilla_gorilla
ENSEEUG00000002024	SMG7	94	63.390	ENSHBUG00000003726	smg7	98	68.712	Haplochromis_burtoni
ENSEEUG00000002024	SMG7	92	96.033	ENSHGLG00000009353	SMG7	97	96.033	Heterocephalus_glaber_female
ENSEEUG00000002024	SMG7	94	87.240	ENSHGLG00100004878	-	97	87.240	Heterocephalus_glaber_male
ENSEEUG00000002024	SMG7	92	94.096	ENSHGLG00100009637	-	96	94.096	Heterocephalus_glaber_male
ENSEEUG00000002024	SMG7	94	65.887	ENSIPUG00000016997	smg7	96	65.974	Ictalurus_punctatus
ENSEEUG00000002024	SMG7	94	96.109	ENSSTOG00000000401	SMG7	97	96.109	Ictidomys_tridecemlineatus
ENSEEUG00000002024	SMG7	94	94.118	ENSJJAG00000012351	Smg7	97	94.118	Jaculus_jaculus
ENSEEUG00000002024	SMG7	91	58.304	ENSKMAG00000004900	smg7	94	66.258	Kryptolebias_marmoratus
ENSEEUG00000002024	SMG7	92	61.698	ENSLBEG00000002983	smg7	95	61.785	Labrus_bergylta
ENSEEUG00000002024	SMG7	92	74.819	ENSLACG00000000972	SMG7	95	75.159	Latimeria_chalumnae
ENSEEUG00000002024	SMG7	94	65.697	ENSLOCG00000002010	smg7	97	66.125	Lepisosteus_oculatus
ENSEEUG00000002024	SMG7	92	96.402	ENSLAFG00000008186	SMG7	95	96.402	Loxodonta_africana
ENSEEUG00000002024	SMG7	94	95.837	ENSMFAG00000031653	SMG7	97	95.837	Macaca_fascicularis
ENSEEUG00000002024	SMG7	99	93.878	ENSMMUG00000018458	SMG7	99	93.878	Macaca_mulatta
ENSEEUG00000002024	SMG7	91	92.786	ENSMNEG00000034798	SMG7	97	92.786	Macaca_nemestrina
ENSEEUG00000002024	SMG7	92	96.863	ENSMLEG00000037170	SMG7	93	96.863	Mandrillus_leucophaeus
ENSEEUG00000002024	SMG7	85	63.755	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSEEUG00000002024	SMG7	94	63.613	ENSMZEG00005015247	smg7	97	63.853	Maylandia_zebra
ENSEEUG00000002024	SMG7	92	81.250	ENSMGAG00000001561	SMG7	95	81.426	Meleagris_gallopavo
ENSEEUG00000002024	SMG7	94	94.661	ENSMAUG00000019484	Smg7	97	94.661	Mesocricetus_auratus
ENSEEUG00000002024	SMG7	92	96.956	ENSMICG00000007145	SMG7	94	96.956	Microcebus_murinus
ENSEEUG00000002024	SMG7	94	94.751	ENSMOCG00000020748	Smg7	97	94.751	Microtus_ochrogaster
ENSEEUG00000002024	SMG7	92	59.427	ENSMMOG00000001524	smg7	95	59.582	Mola_mola
ENSEEUG00000002024	SMG7	88	85.213	ENSMODG00000007139	SMG7	98	85.213	Monodelphis_domestica
ENSEEUG00000002024	SMG7	94	63.001	ENSMALG00000000061	smg7	90	64.731	Monopterus_albus
ENSEEUG00000002024	SMG7	94	94.299	MGP_CAROLIEiJ_G0014704	Smg7	97	93.665	Mus_caroli
ENSEEUG00000002024	SMG7	94	94.208	ENSMUSG00000042772	Smg7	97	94.208	Mus_musculus
ENSEEUG00000002024	SMG7	94	94.208	MGP_PahariEiJ_G0027940	Smg7	97	94.208	Mus_pahari
ENSEEUG00000002024	SMG7	94	94.299	MGP_SPRETEiJ_G0015511	Smg7	97	94.299	Mus_spretus
ENSEEUG00000002024	SMG7	92	97.232	ENSMPUG00000011732	SMG7	94	97.232	Mustela_putorius_furo
ENSEEUG00000002024	SMG7	92	96.679	ENSMLUG00000015417	SMG7	95	96.679	Myotis_lucifugus
ENSEEUG00000002024	SMG7	92	95.203	ENSNGAG00000009836	Smg7	95	94.373	Nannospalax_galili
ENSEEUG00000002024	SMG7	92	58.217	ENSNBRG00000024343	smg7	95	66.286	Neolamprologus_brichardi
ENSEEUG00000002024	SMG7	92	96.956	ENSNLEG00000018018	SMG7	93	96.956	Nomascus_leucogenys
ENSEEUG00000002024	SMG7	74	85.876	ENSMEUG00000004681	SMG7	76	86.072	Notamacropus_eugenii
ENSEEUG00000002024	SMG7	96	81.593	ENSOPRG00000013942	SMG7	99	80.763	Ochotona_princeps
ENSEEUG00000002024	SMG7	94	94.842	ENSODEG00000010390	SMG7	97	94.842	Octodon_degus
ENSEEUG00000002024	SMG7	94	60.473	ENSONIG00000000277	smg7	96	61.144	Oreochromis_niloticus
ENSEEUG00000002024	SMG7	92	90.909	ENSOANG00000000994	SMG7	96	91.185	Ornithorhynchus_anatinus
ENSEEUG00000002024	SMG7	92	90.314	ENSOCUG00000005887	SMG7	88	90.314	Oryctolagus_cuniculus
ENSEEUG00000002024	SMG7	94	60.447	ENSORLG00000007314	smg7	65	92.908	Oryzias_latipes
ENSEEUG00000002024	SMG7	94	60.877	ENSORLG00020015779	smg7	65	92.908	Oryzias_latipes_hni
ENSEEUG00000002024	SMG7	92	64.004	ENSORLG00015012289	smg7	96	61.268	Oryzias_latipes_hsok
ENSEEUG00000002024	SMG7	94	61.268	ENSOMEG00000002328	smg7	96	61.268	Oryzias_melastigma
ENSEEUG00000002024	SMG7	99	91.596	ENSOGAG00000003107	SMG7	100	91.087	Otolemur_garnettii
ENSEEUG00000002024	SMG7	92	96.218	ENSOARG00000001352	SMG7	93	96.218	Ovis_aries
ENSEEUG00000002024	SMG7	91	92.876	ENSPPAG00000031619	SMG7	97	92.876	Pan_paniscus
ENSEEUG00000002024	SMG7	99	93.316	ENSPPRG00000011222	SMG7	98	93.231	Panthera_pardus
ENSEEUG00000002024	SMG7	99	93.316	ENSPTIG00000007242	SMG7	98	93.231	Panthera_tigris_altaica
ENSEEUG00000002024	SMG7	99	93.963	ENSPTRG00000001764	SMG7	99	93.963	Pan_troglodytes
ENSEEUG00000002024	SMG7	99	93.963	ENSPANG00000004520	SMG7	99	93.963	Papio_anubis
ENSEEUG00000002024	SMG7	94	62.359	ENSPKIG00000007242	smg7	95	64.588	Paramormyrops_kingsleyae
ENSEEUG00000002024	SMG7	92	91.336	ENSPSIG00000012201	SMG7	95	90.599	Pelodiscus_sinensis
ENSEEUG00000002024	SMG7	94	93.756	ENSPEMG00000011315	Smg7	97	93.756	Peromyscus_maniculatus_bairdii
ENSEEUG00000002024	SMG7	94	88.628	ENSPCIG00000003786	SMG7	97	89.441	Phascolarctos_cinereus
ENSEEUG00000002024	SMG7	94	61.591	ENSPFOG00000019219	smg7	97	61.880	Poecilia_formosa
ENSEEUG00000002024	SMG7	94	59.399	ENSPLAG00000001446	smg7	96	59.399	Poecilia_latipinna
ENSEEUG00000002024	SMG7	94	59.399	ENSPMEG00000005218	smg7	99	59.399	Poecilia_mexicana
ENSEEUG00000002024	SMG7	85	59.431	ENSPREG00000019039	smg7	92	58.702	Poecilia_reticulata
ENSEEUG00000002024	SMG7	94	87.837	ENSPPYG00000000427	SMG7	97	87.837	Pongo_abelii
ENSEEUG00000002024	SMG7	98	82.582	ENSPCAG00000008360	SMG7	100	82.582	Procavia_capensis
ENSEEUG00000002024	SMG7	100	94.232	ENSPCOG00000011996	SMG7	100	93.639	Propithecus_coquereli
ENSEEUG00000002024	SMG7	98	85.195	ENSPVAG00000000851	SMG7	98	85.195	Pteropus_vampyrus
ENSEEUG00000002024	SMG7	94	63.243	ENSPNYG00000007643	smg7	97	63.792	Pundamilia_nyererei
ENSEEUG00000002024	SMG7	94	65.434	ENSPNAG00000011374	smg7	97	65.348	Pygocentrus_nattereri
ENSEEUG00000002024	SMG7	94	94.213	ENSRNOG00000027962	Smg7	100	95.238	Rattus_norvegicus
ENSEEUG00000002024	SMG7	92	96.771	ENSRBIG00000036316	SMG7	93	96.771	Rhinopithecus_bieti
ENSEEUG00000002024	SMG7	94	95.837	ENSRROG00000035719	SMG7	97	95.837	Rhinopithecus_roxellana
ENSEEUG00000002024	SMG7	94	95.747	ENSSBOG00000023454	SMG7	97	95.747	Saimiri_boliviensis_boliviensis
ENSEEUG00000002024	SMG7	94	83.781	ENSSHAG00000013147	SMG7	97	83.521	Sarcophilus_harrisii
ENSEEUG00000002024	SMG7	94	65.685	ENSSFOG00015017252	smg7	95	72.549	Scleropages_formosus
ENSEEUG00000002024	SMG7	94	63.699	ENSSMAG00000006067	smg7	96	63.846	Scophthalmus_maximus
ENSEEUG00000002024	SMG7	87	71.853	ENSSDUG00000017543	smg7	96	60.895	Seriola_dumerili
ENSEEUG00000002024	SMG7	92	82.363	ENSSPUG00000002064	SMG7	95	82.187	Sphenodon_punctatus
ENSEEUG00000002024	SMG7	92	61.813	ENSSPAG00000008733	smg7	95	61.411	Stegastes_partitus
ENSEEUG00000002024	SMG7	94	96.199	ENSSSCG00000015558	SMG7	97	96.199	Sus_scrofa
ENSEEUG00000002024	SMG7	92	80.915	ENSTGUG00000003928	SMG7	96	81.179	Taeniopygia_guttata
ENSEEUG00000002024	SMG7	94	62.684	ENSTNIG00000002802	smg7	96	62.554	Tetraodon_nigroviridis
ENSEEUG00000002024	SMG7	80	92.060	ENSTBEG00000003220	SMG7	80	92.489	Tupaia_belangeri
ENSEEUG00000002024	SMG7	98	95.246	ENSTTRG00000014778	SMG7	99	95.592	Tursiops_truncatus
ENSEEUG00000002024	SMG7	91	92.850	ENSUAMG00000017473	SMG7	96	92.850	Ursus_americanus
ENSEEUG00000002024	SMG7	91	97.366	ENSUMAG00000016389	SMG7	97	97.366	Ursus_maritimus
ENSEEUG00000002024	SMG7	94	96.471	ENSVVUG00000008976	SMG7	97	96.471	Vulpes_vulpes
ENSEEUG00000002024	SMG7	94	64.867	ENSXETG00000012528	smg7	97	65.009	Xenopus_tropicalis
ENSEEUG00000002024	SMG7	94	59.453	ENSXMAG00000007123	smg7	96	59.624	Xiphophorus_maculatus