EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000002158 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4
Alias: CPSF30|NAR
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 8658 bases
Position: chrGeneScaffold_1867:46087-54744
Accession: 2327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000001964	zf-CCCH	PF00642.24	2.1e-08	1	1
ENSEEUP00000001964	zf-CCHC	PF00098.23	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000002156	CPSF4-201	705	-	ENSEEUP00000001964	234 (aa)	-	UPI0000F62A2A

Gene Model

Click here to download ENSEEUG00000002158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000002158's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000002158	CPSF4	73	100.000	ENSG00000160917	CPSF4	68	100.000	Homo_sapiens
ENSEEUG00000002158	CPSF4	73	100.000	ENSAMEG00000006252	CPSF4	63	100.000	Ailuropoda_melanoleuca
ENSEEUG00000002158	CPSF4	73	94.030	ENSACIG00000009248	cpsf4	59	94.030	Amphilophus_citrinellus
ENSEEUG00000002158	CPSF4	73	94.030	ENSAOCG00000019616	cpsf4	63	94.030	Amphiprion_ocellaris
ENSEEUG00000002158	CPSF4	73	94.030	ENSAPEG00000011679	cpsf4	63	94.030	Amphiprion_percula
ENSEEUG00000002158	CPSF4	73	94.030	ENSATEG00000007010	cpsf4	63	94.030	Anabas_testudineus
ENSEEUG00000002158	CPSF4	73	97.015	ENSACAG00000012941	CPSF4	56	97.015	Anolis_carolinensis
ENSEEUG00000002158	CPSF4	73	100.000	ENSANAG00000021360	CPSF4	68	100.000	Aotus_nancymaae
ENSEEUG00000002158	CPSF4	73	94.030	ENSACLG00000010374	cpsf4	63	94.030	Astatotilapia_calliptera
ENSEEUG00000002158	CPSF4	73	97.015	ENSAMXG00000031647	cpsf4	67	97.015	Astyanax_mexicanus
ENSEEUG00000002158	CPSF4	73	100.000	ENSBTAG00000002090	CPSF4	59	100.000	Bos_taurus
ENSEEUG00000002158	CPSF4	73	100.000	ENSCJAG00000015826	CPSF4	68	100.000	Callithrix_jacchus
ENSEEUG00000002158	CPSF4	73	100.000	ENSCAFG00000015036	CPSF4	68	100.000	Canis_familiaris
ENSEEUG00000002158	CPSF4	66	100.000	ENSCAFG00020014462	CPSF4	63	100.000	Canis_lupus_dingo
ENSEEUG00000002158	CPSF4	73	100.000	ENSCHIG00000014313	CPSF4	68	100.000	Capra_hircus
ENSEEUG00000002158	CPSF4	72	95.522	ENSTSYG00000014604	-	69	95.522	Carlito_syrichta
ENSEEUG00000002158	CPSF4	72	95.522	ENSTSYG00000008195	-	81	95.522	Carlito_syrichta
ENSEEUG00000002158	CPSF4	73	100.000	ENSTSYG00000005712	-	68	100.000	Carlito_syrichta
ENSEEUG00000002158	CPSF4	66	100.000	ENSCAPG00000013881	CPSF4	66	100.000	Cavia_aperea
ENSEEUG00000002158	CPSF4	73	100.000	ENSCPOG00000001783	CPSF4	68	100.000	Cavia_porcellus
ENSEEUG00000002158	CPSF4	73	100.000	ENSCCAG00000028291	CPSF4	68	100.000	Cebus_capucinus
ENSEEUG00000002158	CPSF4	73	100.000	ENSCATG00000038440	CPSF4	68	100.000	Cercocebus_atys
ENSEEUG00000002158	CPSF4	73	100.000	ENSCLAG00000007050	CPSF4	68	100.000	Chinchilla_lanigera
ENSEEUG00000002158	CPSF4	73	100.000	ENSCSAG00000017795	CPSF4	63	100.000	Chlorocebus_sabaeus
ENSEEUG00000002158	CPSF4	65	100.000	ENSCPBG00000020869	CPSF4	70	100.000	Chrysemys_picta_bellii
ENSEEUG00000002158	CPSF4	73	100.000	ENSCANG00000019384	CPSF4	68	100.000	Colobus_angolensis_palliatus
ENSEEUG00000002158	CPSF4	73	100.000	ENSCGRG00001024184	Cpsf4	68	100.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000002158	CPSF4	73	100.000	ENSCGRG00000013892	Cpsf4	68	100.000	Cricetulus_griseus_crigri
ENSEEUG00000002158	CPSF4	73	94.030	ENSCSEG00000019055	cpsf4	68	94.030	Cynoglossus_semilaevis
ENSEEUG00000002158	CPSF4	73	92.537	ENSCVAG00000016528	cpsf4	63	92.537	Cyprinodon_variegatus
ENSEEUG00000002158	CPSF4	73	94.030	ENSDARG00000020217	cpsf4	63	94.030	Danio_rerio
ENSEEUG00000002158	CPSF4	73	100.000	ENSDNOG00000006344	CPSF4	63	100.000	Dasypus_novemcinctus
ENSEEUG00000002158	CPSF4	65	100.000	ENSDORG00000000742	Cpsf4	71	100.000	Dipodomys_ordii
ENSEEUG00000002158	CPSF4	56	83.582	ENSEBUG00000012552	cpsf4	56	83.582	Eptatretus_burgeri
ENSEEUG00000002158	CPSF4	73	100.000	ENSEASG00005002487	CPSF4	59	100.000	Equus_asinus_asinus
ENSEEUG00000002158	CPSF4	73	100.000	ENSECAG00000007525	CPSF4	68	100.000	Equus_caballus
ENSEEUG00000002158	CPSF4	73	95.522	ENSELUG00000011481	cpsf4	64	95.522	Esox_lucius
ENSEEUG00000002158	CPSF4	73	100.000	ENSFCAG00000015070	CPSF4	68	100.000	Felis_catus
ENSEEUG00000002158	CPSF4	73	100.000	ENSFALG00000013799	CPSF4	59	100.000	Ficedula_albicollis
ENSEEUG00000002158	CPSF4	73	100.000	ENSFDAG00000014092	CPSF4	78	100.000	Fukomys_damarensis
ENSEEUG00000002158	CPSF4	73	92.537	ENSFHEG00000010880	cpsf4	63	92.537	Fundulus_heteroclitus
ENSEEUG00000002158	CPSF4	73	92.754	ENSGMOG00000002330	cpsf4	62	92.754	Gadus_morhua
ENSEEUG00000002158	CPSF4	73	100.000	ENSGALG00000004714	CPSF4	59	100.000	Gallus_gallus
ENSEEUG00000002158	CPSF4	73	92.537	ENSGAFG00000010580	cpsf4	63	92.537	Gambusia_affinis
ENSEEUG00000002158	CPSF4	73	91.304	ENSGACG00000007792	cpsf4	61	91.304	Gasterosteus_aculeatus
ENSEEUG00000002158	CPSF4	73	98.507	ENSGAGG00000021835	CPSF4	63	98.507	Gopherus_agassizii
ENSEEUG00000002158	CPSF4	73	100.000	ENSGGOG00000015131	CPSF4	68	100.000	Gorilla_gorilla
ENSEEUG00000002158	CPSF4	73	94.030	ENSHBUG00000013699	cpsf4	63	94.030	Haplochromis_burtoni
ENSEEUG00000002158	CPSF4	73	100.000	ENSHGLG00000017150	CPSF4	68	100.000	Heterocephalus_glaber_female
ENSEEUG00000002158	CPSF4	73	95.238	ENSHGLG00100009215	-	82	94.030	Heterocephalus_glaber_male
ENSEEUG00000002158	CPSF4	73	94.030	ENSHCOG00000004397	cpsf4	63	94.030	Hippocampus_comes
ENSEEUG00000002158	CPSF4	73	94.030	ENSIPUG00000017147	cpsf4	63	94.030	Ictalurus_punctatus
ENSEEUG00000002158	CPSF4	73	100.000	ENSSTOG00000001688	CPSF4	68	100.000	Ictidomys_tridecemlineatus
ENSEEUG00000002158	CPSF4	73	100.000	ENSJJAG00000019426	Cpsf4	68	100.000	Jaculus_jaculus
ENSEEUG00000002158	CPSF4	73	91.045	ENSKMAG00000015642	cpsf4	63	91.045	Kryptolebias_marmoratus
ENSEEUG00000002158	CPSF4	73	98.507	ENSLACG00000010938	CPSF4	63	98.507	Latimeria_chalumnae
ENSEEUG00000002158	CPSF4	73	98.507	ENSLOCG00000004814	cpsf4	63	98.507	Lepisosteus_oculatus
ENSEEUG00000002158	CPSF4	73	100.000	ENSLAFG00000000159	CPSF4	80	100.000	Loxodonta_africana
ENSEEUG00000002158	CPSF4	73	100.000	ENSMFAG00000001462	CPSF4	68	100.000	Macaca_fascicularis
ENSEEUG00000002158	CPSF4	73	100.000	ENSMMUG00000019191	CPSF4	68	100.000	Macaca_mulatta
ENSEEUG00000002158	CPSF4	73	100.000	ENSMNEG00000032306	CPSF4	68	100.000	Macaca_nemestrina
ENSEEUG00000002158	CPSF4	73	100.000	ENSMLEG00000034721	CPSF4	68	100.000	Mandrillus_leucophaeus
ENSEEUG00000002158	CPSF4	73	94.030	ENSMAMG00000006244	cpsf4	63	94.030	Mastacembelus_armatus
ENSEEUG00000002158	CPSF4	73	94.030	ENSMZEG00005007515	cpsf4	63	94.030	Maylandia_zebra
ENSEEUG00000002158	CPSF4	73	100.000	ENSMGAG00000004235	CPSF4	69	100.000	Meleagris_gallopavo
ENSEEUG00000002158	CPSF4	73	100.000	ENSMAUG00000021253	Cpsf4	68	100.000	Mesocricetus_auratus
ENSEEUG00000002158	CPSF4	73	100.000	ENSMICG00000017429	CPSF4	68	100.000	Microcebus_murinus
ENSEEUG00000002158	CPSF4	73	100.000	ENSMOCG00000014901	Cpsf4	68	100.000	Microtus_ochrogaster
ENSEEUG00000002158	CPSF4	73	94.030	ENSMMOG00000001813	cpsf4	67	94.030	Mola_mola
ENSEEUG00000002158	CPSF4	73	100.000	ENSMODG00000001367	CPSF4	63	100.000	Monodelphis_domestica
ENSEEUG00000002158	CPSF4	73	94.030	ENSMALG00000012611	cpsf4	61	98.077	Monopterus_albus
ENSEEUG00000002158	CPSF4	73	100.000	MGP_CAROLIEiJ_G0028012	Cpsf4	68	100.000	Mus_caroli
ENSEEUG00000002158	CPSF4	73	100.000	ENSMUSG00000029625	Cpsf4	68	100.000	Mus_musculus
ENSEEUG00000002158	CPSF4	73	100.000	MGP_PahariEiJ_G0024581	Cpsf4	68	100.000	Mus_pahari
ENSEEUG00000002158	CPSF4	73	100.000	MGP_SPRETEiJ_G0029013	Cpsf4	68	100.000	Mus_spretus
ENSEEUG00000002158	CPSF4	73	100.000	ENSMPUG00000016508	CPSF4	63	100.000	Mustela_putorius_furo
ENSEEUG00000002158	CPSF4	73	100.000	ENSMLUG00000010980	CPSF4	69	100.000	Myotis_lucifugus
ENSEEUG00000002158	CPSF4	73	100.000	ENSNGAG00000001567	Cpsf4	68	100.000	Nannospalax_galili
ENSEEUG00000002158	CPSF4	73	94.030	ENSNBRG00000003943	cpsf4	67	94.030	Neolamprologus_brichardi
ENSEEUG00000002158	CPSF4	73	100.000	ENSNLEG00000011074	CPSF4	68	100.000	Nomascus_leucogenys
ENSEEUG00000002158	CPSF4	73	100.000	ENSMEUG00000006955	CPSF4	63	100.000	Notamacropus_eugenii
ENSEEUG00000002158	CPSF4	73	100.000	ENSOPRG00000013663	CPSF4	63	100.000	Ochotona_princeps
ENSEEUG00000002158	CPSF4	73	73.786	ENSODEG00000009779	-	58	73.786	Octodon_degus
ENSEEUG00000002158	CPSF4	66	96.429	ENSODEG00000018283	-	59	96.429	Octodon_degus
ENSEEUG00000002158	CPSF4	73	100.000	ENSODEG00000011181	-	68	100.000	Octodon_degus
ENSEEUG00000002158	CPSF4	73	94.030	ENSONIG00000008495	cpsf4	63	94.030	Oreochromis_niloticus
ENSEEUG00000002158	CPSF4	73	100.000	ENSOANG00000007729	CPSF4	72	100.000	Ornithorhynchus_anatinus
ENSEEUG00000002158	CPSF4	73	92.537	ENSORLG00000022798	cpsf4	63	92.537	Oryzias_latipes
ENSEEUG00000002158	CPSF4	73	92.537	ENSORLG00020008548	cpsf4	63	92.537	Oryzias_latipes_hni
ENSEEUG00000002158	CPSF4	73	92.537	ENSORLG00015019575	cpsf4	63	92.537	Oryzias_latipes_hsok
ENSEEUG00000002158	CPSF4	73	92.537	ENSOMEG00000005176	cpsf4	68	92.537	Oryzias_melastigma
ENSEEUG00000002158	CPSF4	73	100.000	ENSOGAG00000010884	CPSF4	63	100.000	Otolemur_garnettii
ENSEEUG00000002158	CPSF4	69	88.333	ENSOARG00000018668	CPSF4	52	96.296	Ovis_aries
ENSEEUG00000002158	CPSF4	73	100.000	ENSPPAG00000043355	CPSF4	68	100.000	Pan_paniscus
ENSEEUG00000002158	CPSF4	73	100.000	ENSPPRG00000003134	CPSF4	68	100.000	Panthera_pardus
ENSEEUG00000002158	CPSF4	73	100.000	ENSPTIG00000005604	CPSF4	68	100.000	Panthera_tigris_altaica
ENSEEUG00000002158	CPSF4	73	100.000	ENSPTRG00000019453	CPSF4	68	100.000	Pan_troglodytes
ENSEEUG00000002158	CPSF4	73	100.000	ENSPANG00000023123	CPSF4	68	100.000	Papio_anubis
ENSEEUG00000002158	CPSF4	73	97.015	ENSPKIG00000014278	cpsf4	64	97.015	Paramormyrops_kingsleyae
ENSEEUG00000002158	CPSF4	65	100.000	ENSPSIG00000011229	CPSF4	70	100.000	Pelodiscus_sinensis
ENSEEUG00000002158	CPSF4	66	100.000	ENSPMGG00000017735	cpsf4	53	100.000	Periophthalmus_magnuspinnatus
ENSEEUG00000002158	CPSF4	73	100.000	ENSPEMG00000004508	Cpsf4	68	100.000	Peromyscus_maniculatus_bairdii
ENSEEUG00000002158	CPSF4	73	100.000	ENSPCIG00000024776	CPSF4	63	100.000	Phascolarctos_cinereus
ENSEEUG00000002158	CPSF4	73	92.537	ENSPFOG00000014912	cpsf4	63	92.537	Poecilia_formosa
ENSEEUG00000002158	CPSF4	60	92.537	ENSPLAG00000009599	cpsf4	56	92.537	Poecilia_latipinna
ENSEEUG00000002158	CPSF4	73	92.537	ENSPMEG00000009790	cpsf4	63	92.537	Poecilia_mexicana
ENSEEUG00000002158	CPSF4	73	92.537	ENSPREG00000018166	cpsf4	62	92.537	Poecilia_reticulata
ENSEEUG00000002158	CPSF4	73	98.507	ENSPPYG00000017378	CPSF4	73	98.507	Pongo_abelii
ENSEEUG00000002158	CPSF4	73	99.029	ENSPCAG00000001892	CPSF4	63	99.029	Procavia_capensis
ENSEEUG00000002158	CPSF4	73	100.000	ENSPCOG00000012771	CPSF4	68	100.000	Propithecus_coquereli
ENSEEUG00000002158	CPSF4	65	100.000	ENSPVAG00000007531	CPSF4	57	100.000	Pteropus_vampyrus
ENSEEUG00000002158	CPSF4	73	94.030	ENSPNYG00000018559	cpsf4	63	94.030	Pundamilia_nyererei
ENSEEUG00000002158	CPSF4	73	95.522	ENSPNAG00000003736	cpsf4	63	95.522	Pygocentrus_nattereri
ENSEEUG00000002158	CPSF4	73	100.000	ENSRNOG00000000985	Cpsf4	68	100.000	Rattus_norvegicus
ENSEEUG00000002158	CPSF4	73	100.000	ENSRBIG00000033886	CPSF4	82	100.000	Rhinopithecus_bieti
ENSEEUG00000002158	CPSF4	73	100.000	ENSRROG00000040431	CPSF4	68	100.000	Rhinopithecus_roxellana
ENSEEUG00000002158	CPSF4	73	100.000	ENSSBOG00000020493	CPSF4	68	100.000	Saimiri_boliviensis_boliviensis
ENSEEUG00000002158	CPSF4	73	100.000	ENSSHAG00000011533	CPSF4	63	100.000	Sarcophilus_harrisii
ENSEEUG00000002158	CPSF4	73	97.015	ENSSFOG00015007883	cpsf4	64	97.015	Scleropages_formosus
ENSEEUG00000002158	CPSF4	73	94.030	ENSSMAG00000006374	cpsf4	59	94.030	Scophthalmus_maximus
ENSEEUG00000002158	CPSF4	73	94.030	ENSSDUG00000018887	cpsf4	63	94.030	Seriola_dumerili
ENSEEUG00000002158	CPSF4	73	94.030	ENSSLDG00000019078	cpsf4	63	94.030	Seriola_lalandi_dorsalis
ENSEEUG00000002158	CPSF4	73	100.000	ENSSARG00000012416	CPSF4	73	100.000	Sorex_araneus
ENSEEUG00000002158	CPSF4	73	100.000	ENSSPUG00000003549	CPSF4	63	100.000	Sphenodon_punctatus
ENSEEUG00000002158	CPSF4	73	94.030	ENSSPAG00000006174	cpsf4	59	94.030	Stegastes_partitus
ENSEEUG00000002158	CPSF4	73	100.000	ENSSSCG00000026896	CPSF4	59	100.000	Sus_scrofa
ENSEEUG00000002158	CPSF4	73	95.652	ENSTGUG00000007552	CPSF4	60	95.652	Taeniopygia_guttata
ENSEEUG00000002158	CPSF4	73	92.537	ENSTRUG00000024220	cpsf4	62	92.537	Takifugu_rubripes
ENSEEUG00000002158	CPSF4	73	92.537	ENSTNIG00000006265	cpsf4	62	92.537	Tetraodon_nigroviridis
ENSEEUG00000002158	CPSF4	67	97.778	ENSTBEG00000011406	CPSF4	67	97.778	Tupaia_belangeri
ENSEEUG00000002158	CPSF4	73	100.000	ENSTTRG00000003007	CPSF4	63	100.000	Tursiops_truncatus
ENSEEUG00000002158	CPSF4	73	100.000	ENSUMAG00000009474	CPSF4	59	100.000	Ursus_maritimus
ENSEEUG00000002158	CPSF4	73	100.000	ENSVVUG00000008824	CPSF4	59	100.000	Vulpes_vulpes
ENSEEUG00000002158	CPSF4	73	98.507	ENSXETG00000009892	cpsf4	61	98.507	Xenopus_tropicalis
ENSEEUG00000002158	CPSF4	73	91.045	ENSXCOG00000016040	cpsf4	68	91.045	Xiphophorus_couchianus
ENSEEUG00000002158	CPSF4	73	92.537	ENSXMAG00000024670	cpsf4	63	92.537	Xiphophorus_maculatus