EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000002790 (Gene tree)
Gene ID: -
Gene Symbol: RAB5C
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 5661 bases
Position: chrGeneScaffold_6690:132729-138389
Accession: 103124278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000002545	MMR_HSR1	PF01926.23	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000002780	RAB5C-201	651	-	ENSEEUP00000002545	216 (aa)	XP_007535054	A0A1S3AHA4

Gene Model

Click here to download ENSEEUG00000002790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000002790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000002790	RAB5C	75	33.742	ENSEEUG00000003058	KRAS	85	33.742
ENSEEUG00000002790	RAB5C	55	31.967	ENSEEUG00000000612	ARL8B	68	31.967
ENSEEUG00000002790	RAB5C	55	33.613	ENSEEUG00000004731	RAB34	78	33.613
ENSEEUG00000002790	RAB5C	89	43.077	ENSEEUG00000011721	RAB1A	96	43.077
ENSEEUG00000002790	RAB5C	81	36.158	ENSEEUG00000015045	RAB23	74	36.158
ENSEEUG00000002790	RAB5C	63	40.000	ENSEEUG00000013074	RAB14	63	40.000
ENSEEUG00000002790	RAB5C	78	42.938	ENSEEUG00000014804	RAB25	69	44.720
ENSEEUG00000002790	RAB5C	89	34.896	ENSEEUG00000001233	-	95	34.896
ENSEEUG00000002790	RAB5C	89	34.343	ENSEEUG00000005264	RAB9B	97	34.343
ENSEEUG00000002790	RAB5C	97	85.167	ENSEEUG00000006745	RAB5B	97	85.167
ENSEEUG00000002790	RAB5C	100	86.574	ENSEEUG00000009044	RAB5A	100	86.574
ENSEEUG00000002790	RAB5C	61	49.242	ENSEEUG00000009165	-	92	49.242
ENSEEUG00000002790	RAB5C	89	44.330	ENSEEUG00000013465	RAB1B	96	44.330
ENSEEUG00000002790	RAB5C	69	34.667	ENSEEUG00000014548	HRAS	86	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000002790	RAB5C	100	99.074	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSEEUG00000002790	RAB5C	99	88.837	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSEEUG00000002790	RAB5C	100	99.074	ENSAMEG00000006003	RAB5C	100	99.074	Ailuropoda_melanoleuca
ENSEEUG00000002790	RAB5C	99	88.426	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSEEUG00000002790	RAB5C	99	88.889	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSEEUG00000002790	RAB5C	97	88.626	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSEEUG00000002790	RAB5C	100	89.450	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSEEUG00000002790	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSEEUG00000002790	RAB5C	99	87.500	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSEEUG00000002790	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSEEUG00000002790	RAB5C	96	88.095	ENSAMXG00000037267	-	99	90.476	Astyanax_mexicanus
ENSEEUG00000002790	RAB5C	99	89.401	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSEEUG00000002790	RAB5C	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSEEUG00000002790	RAB5C	99	75.349	WBGene00004268	rab-5	99	75.349	Caenorhabditis_elegans
ENSEEUG00000002790	RAB5C	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSEEUG00000002790	RAB5C	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSEEUG00000002790	RAB5C	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSEEUG00000002790	RAB5C	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSEEUG00000002790	RAB5C	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSEEUG00000002790	RAB5C	100	99.074	ENSCATG00000040873	RAB5C	100	99.074	Cercocebus_atys
ENSEEUG00000002790	RAB5C	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSEEUG00000002790	RAB5C	82	98.876	ENSCHOG00000009886	RAB5C	100	98.876	Choloepus_hoffmanni
ENSEEUG00000002790	RAB5C	99	77.103	ENSCING00000003340	-	99	77.103	Ciona_intestinalis
ENSEEUG00000002790	RAB5C	99	74.545	ENSCSAVG00000000613	-	99	82.716	Ciona_savignyi
ENSEEUG00000002790	RAB5C	100	98.148	ENSCGRG00001014226	Rab5c	100	98.148	Cricetulus_griseus_chok1gshd
ENSEEUG00000002790	RAB5C	100	98.148	ENSCGRG00000007534	Rab5c	100	98.148	Cricetulus_griseus_crigri
ENSEEUG00000002790	RAB5C	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSEEUG00000002790	RAB5C	99	88.889	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSEEUG00000002790	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSEEUG00000002790	RAB5C	100	98.611	ENSDORG00000006819	Rab5c	100	98.611	Dipodomys_ordii
ENSEEUG00000002790	RAB5C	99	74.178	FBgn0014010	Rab5	95	74.178	Drosophila_melanogaster
ENSEEUG00000002790	RAB5C	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSEEUG00000002790	RAB5C	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSEEUG00000002790	RAB5C	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSEEUG00000002790	RAB5C	99	87.500	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSEEUG00000002790	RAB5C	99	87.963	ENSELUG00000010439	-	98	87.963	Esox_lucius
ENSEEUG00000002790	RAB5C	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSEEUG00000002790	RAB5C	100	96.296	ENSFDAG00000021541	RAB5C	100	96.296	Fukomys_damarensis
ENSEEUG00000002790	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSEEUG00000002790	RAB5C	99	88.889	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSEEUG00000002790	RAB5C	78	87.574	ENSGMOG00000001876	-	98	87.574	Gadus_morhua
ENSEEUG00000002790	RAB5C	99	87.500	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSEEUG00000002790	RAB5C	99	89.352	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSEEUG00000002790	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSEEUG00000002790	RAB5C	87	94.149	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSEEUG00000002790	RAB5C	100	99.074	ENSGGOG00000005472	RAB5C	100	99.074	Gorilla_gorilla
ENSEEUG00000002790	RAB5C	99	87.500	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSEEUG00000002790	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSEEUG00000002790	RAB5C	100	94.907	ENSHGLG00000012067	RAB5C	100	94.907	Heterocephalus_glaber_female
ENSEEUG00000002790	RAB5C	97	81.604	ENSHCOG00000020238	-	100	80.000	Hippocampus_comes
ENSEEUG00000002790	RAB5C	99	89.401	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSEEUG00000002790	RAB5C	96	87.143	ENSIPUG00000020082	rab5c	98	88.073	Ictalurus_punctatus
ENSEEUG00000002790	RAB5C	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSEEUG00000002790	RAB5C	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSEEUG00000002790	RAB5C	99	88.018	ENSKMAG00000017417	-	99	88.018	Kryptolebias_marmoratus
ENSEEUG00000002790	RAB5C	99	88.426	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSEEUG00000002790	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSEEUG00000002790	RAB5C	99	89.815	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSEEUG00000002790	RAB5C	99	92.991	ENSLOCG00000012566	rab5c	100	92.991	Lepisosteus_oculatus
ENSEEUG00000002790	RAB5C	100	99.074	ENSMFAG00000039627	RAB5C	100	99.074	Macaca_fascicularis
ENSEEUG00000002790	RAB5C	100	99.074	ENSMNEG00000000355	RAB5C	100	99.074	Macaca_nemestrina
ENSEEUG00000002790	RAB5C	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSEEUG00000002790	RAB5C	99	87.963	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSEEUG00000002790	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSEEUG00000002790	RAB5C	99	87.500	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSEEUG00000002790	RAB5C	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSEEUG00000002790	RAB5C	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSEEUG00000002790	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSEEUG00000002790	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSEEUG00000002790	RAB5C	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSEEUG00000002790	RAB5C	99	87.156	ENSMALG00000022348	-	99	87.156	Monopterus_albus
ENSEEUG00000002790	RAB5C	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSEEUG00000002790	RAB5C	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSEEUG00000002790	RAB5C	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSEEUG00000002790	RAB5C	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSEEUG00000002790	RAB5C	100	99.074	ENSMPUG00000010554	RAB5C	100	99.074	Mustela_putorius_furo
ENSEEUG00000002790	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSEEUG00000002790	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSEEUG00000002790	RAB5C	99	88.426	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSEEUG00000002790	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSEEUG00000002790	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSEEUG00000002790	RAB5C	99	88.426	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSEEUG00000002790	RAB5C	100	88.073	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSEEUG00000002790	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSEEUG00000002790	RAB5C	100	88.073	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSEEUG00000002790	RAB5C	100	88.073	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSEEUG00000002790	RAB5C	100	99.074	ENSOGAG00000009456	RAB5C	100	99.074	Otolemur_garnettii
ENSEEUG00000002790	RAB5C	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSEEUG00000002790	RAB5C	100	99.074	ENSPPAG00000037206	RAB5C	100	99.074	Pan_paniscus
ENSEEUG00000002790	RAB5C	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSEEUG00000002790	RAB5C	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSEEUG00000002790	RAB5C	100	99.074	ENSPTRG00000009194	RAB5C	100	99.074	Pan_troglodytes
ENSEEUG00000002790	RAB5C	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSEEUG00000002790	RAB5C	99	88.837	ENSPKIG00000001237	-	99	88.837	Paramormyrops_kingsleyae
ENSEEUG00000002790	RAB5C	99	85.648	ENSPMGG00000010792	rab5c	97	89.573	Periophthalmus_magnuspinnatus
ENSEEUG00000002790	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSEEUG00000002790	RAB5C	99	78.505	ENSPMAG00000007867	rab5c	99	78.505	Petromyzon_marinus
ENSEEUG00000002790	RAB5C	99	79.070	ENSPMAG00000001399	rab5c	100	79.070	Petromyzon_marinus
ENSEEUG00000002790	RAB5C	99	78.378	ENSPMAG00000000008	rab5c	100	78.378	Petromyzon_marinus
ENSEEUG00000002790	RAB5C	100	97.222	ENSPCIG00000020225	-	100	97.222	Phascolarctos_cinereus
ENSEEUG00000002790	RAB5C	99	89.352	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSEEUG00000002790	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSEEUG00000002790	RAB5C	99	89.352	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSEEUG00000002790	RAB5C	98	88.263	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSEEUG00000002790	RAB5C	99	89.352	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSEEUG00000002790	RAB5C	87	92.063	ENSPREG00000022167	-	89	93.443	Poecilia_reticulata
ENSEEUG00000002790	RAB5C	100	99.074	ENSPPYG00000008398	RAB5C	100	99.074	Pongo_abelii
ENSEEUG00000002790	RAB5C	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSEEUG00000002790	RAB5C	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSEEUG00000002790	RAB5C	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSEEUG00000002790	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSEEUG00000002790	RAB5C	99	87.500	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSEEUG00000002790	RAB5C	99	90.783	ENSPNAG00000028138	rab5c	98	90.783	Pygocentrus_nattereri
ENSEEUG00000002790	RAB5C	97	86.321	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSEEUG00000002790	RAB5C	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSEEUG00000002790	RAB5C	100	99.074	ENSRBIG00000031376	RAB5C	100	99.074	Rhinopithecus_bieti
ENSEEUG00000002790	RAB5C	100	99.074	ENSRROG00000032895	RAB5C	100	99.074	Rhinopithecus_roxellana
ENSEEUG00000002790	RAB5C	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSEEUG00000002790	RAB5C	100	97.685	ENSSHAG00000005267	-	100	97.685	Sarcophilus_harrisii
ENSEEUG00000002790	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSEEUG00000002790	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSEEUG00000002790	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSEEUG00000002790	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSEEUG00000002790	RAB5C	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSEEUG00000002790	RAB5C	99	89.352	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSEEUG00000002790	RAB5C	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSEEUG00000002790	RAB5C	99	87.500	ENSTRUG00000015590	rab5c	98	89.815	Takifugu_rubripes
ENSEEUG00000002790	RAB5C	96	90.431	ENSTNIG00000011711	rab5c	95	90.431	Tetraodon_nigroviridis
ENSEEUG00000002790	RAB5C	100	99.074	ENSTBEG00000007092	RAB5C	100	99.074	Tupaia_belangeri
ENSEEUG00000002790	RAB5C	100	98.148	ENSTTRG00000006673	RAB5C	100	98.148	Tursiops_truncatus
ENSEEUG00000002790	RAB5C	100	99.074	ENSUAMG00000024343	RAB5C	100	99.074	Ursus_americanus
ENSEEUG00000002790	RAB5C	100	99.074	ENSUMAG00000023270	RAB5C	100	99.074	Ursus_maritimus
ENSEEUG00000002790	RAB5C	96	91.429	ENSXCOG00000006300	-	99	88.636	Xiphophorus_couchianus
ENSEEUG00000002790	RAB5C	99	88.889	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSEEUG00000002790	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus
ENSEEUG00000002790	RAB5C	99	89.352	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus