EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEEUG00000002962 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Erinaceus_europaeus
Status
putative
Strand
Plus strand
Length
11517 bases
Position
chrscaffold_217710:2481-13997
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEEUP00000002730PABPPF00658.181e-3111
ENSEEUP00000002730RRM_5PF13893.62.1e-0911
ENSEEUP00000002730RRM_1PF00076.227.7e-9114
ENSEEUP00000002730RRM_1PF00076.227.7e-9124
ENSEEUP00000002730RRM_1PF00076.227.7e-9134
ENSEEUP00000002730RRM_1PF00076.227.7e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEEUT00000002975PABPC4-2011971-ENSEEUP00000002730656 (aa)-UPI0000F61B6E
Gene Model
Click here to download ENSEEUG00000002962's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000002962's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEEUG00000002962PABPC45532.000ENSEEUG00000011861TIAL18031.429
ENSEEUG00000002962PABPC49862.250ENSEEUG00000005978PABPC1L9962.037
ENSEEUG00000002962PABPC45538.158ENSEEUG00000005658CELF25538.158
ENSEEUG00000002962PABPC45671.574ENSEEUG00000008203-9971.574
ENSEEUG00000002962PABPC49771.859ENSEEUG00000002701PABPC19771.380
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEEUG00000002962PABPC410096.212ENSG00000090621PABPC4100100.000Homo_sapiens
ENSEEUG00000002962PABPC49978.636ENSAPOG00000001161pabpc49779.601Acanthochromis_polyacanthus
ENSEEUG00000002962PABPC49853.456ENSAMEG00000015083-9753.281Ailuropoda_melanoleuca
ENSEEUG00000002962PABPC410095.758ENSAMEG00000011535-10095.758Ailuropoda_melanoleuca
ENSEEUG00000002962PABPC410078.774ENSACIG00000023343pabpc49779.908Amphilophus_citrinellus
ENSEEUG00000002962PABPC49978.485ENSAOCG00000021529pabpc49779.141Amphiprion_ocellaris
ENSEEUG00000002962PABPC49978.485ENSAPEG00000019196pabpc49779.141Amphiprion_percula
ENSEEUG00000002962PABPC49977.644ENSATEG00000007402pabpc49778.714Anabas_testudineus
ENSEEUG00000002962PABPC49985.281ENSAPLG00000009729-9885.626Anas_platyrhynchos
ENSEEUG00000002962PABPC49983.163ENSACAG00000002544PABPC49883.507Anolis_carolinensis
ENSEEUG00000002962PABPC410096.061ENSANAG00000025079PABPC410096.061Aotus_nancymaae
ENSEEUG00000002962PABPC410078.176ENSACLG00000019558pabpc49779.141Astatotilapia_calliptera
ENSEEUG00000002962PABPC49974.242ENSAMXG00000018779pabpc49874.962Astyanax_mexicanus
ENSEEUG00000002962PABPC410093.495ENSBTAG00000017125PABPC410093.495Bos_taurus
ENSEEUG00000002962PABPC45586.228ENSBTAG00000048536-9886.228Bos_taurus
ENSEEUG00000002962PABPC47879.044ENSCJAG00000045953-9279.044Callithrix_jacchus
ENSEEUG00000002962PABPC410095.909ENSCJAG00000002512-10095.909Callithrix_jacchus
ENSEEUG00000002962PABPC49995.470ENSCAFG00000003081PABPC410091.667Canis_familiaris
ENSEEUG00000002962PABPC410095.909ENSCAFG00020004161PABPC410095.909Canis_lupus_dingo
ENSEEUG00000002962PABPC410074.581ENSCHIG00000023385-9874.689Capra_hircus
ENSEEUG00000002962PABPC410095.909ENSCHIG00000019398-10095.909Capra_hircus
ENSEEUG00000002962PABPC410096.364ENSTSYG00000006532PABPC410096.364Carlito_syrichta
ENSEEUG00000002962PABPC49995.897ENSCAPG00000015984PABPC410095.897Cavia_aperea
ENSEEUG00000002962PABPC410096.061ENSCPOG00000009552PABPC410096.061Cavia_porcellus
ENSEEUG00000002962PABPC410096.061ENSCCAG00000037306PABPC410096.061Cebus_capucinus
ENSEEUG00000002962PABPC410096.364ENSCATG00000042164PABPC410096.364Cercocebus_atys
ENSEEUG00000002962PABPC410096.061ENSCLAG00000011899PABPC410096.061Chinchilla_lanigera
ENSEEUG00000002962PABPC410096.364ENSCSAG00000001135PABPC410096.364Chlorocebus_sabaeus
ENSEEUG00000002962PABPC48294.960ENSCHOG00000005327PABPC48194.960Choloepus_hoffmanni
ENSEEUG00000002962PABPC49985.584ENSCPBG00000001038PABPC49885.935Chrysemys_picta_bellii
ENSEEUG00000002962PABPC49996.160ENSCANG00000034177PABPC410096.160Colobus_angolensis_palliatus
ENSEEUG00000002962PABPC49995.084ENSCGRG00001018166Pabpc49794.590Cricetulus_griseus_chok1gshd
ENSEEUG00000002962PABPC49892.523ENSCGRG00000009777Pabpc49792.006Cricetulus_griseus_crigri
ENSEEUG00000002962PABPC410077.429ENSCSEG00000000130pabpc49778.528Cynoglossus_semilaevis
ENSEEUG00000002962PABPC49978.267ENSCVAG00000019246pabpc49879.316Cyprinodon_variegatus
ENSEEUG00000002962PABPC49979.818ENSDARG00000059259pabpc410080.377Danio_rerio
ENSEEUG00000002962PABPC49896.034ENSDNOG00000018444-9896.007Dasypus_novemcinctus
ENSEEUG00000002962PABPC410093.636ENSDORG00000011581Pabpc410093.636Dipodomys_ordii
ENSEEUG00000002962PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSEEUG00000002962PABPC48661.199ENSETEG00000009172-9761.141Echinops_telfairi
ENSEEUG00000002962PABPC49973.979ENSEBUG00000000992pabpc49880.130Eptatretus_burgeri
ENSEEUG00000002962PABPC49773.333ENSEBUG00000013782pabpc49872.265Eptatretus_burgeri
ENSEEUG00000002962PABPC410096.364ENSEASG00005014119PABPC410096.364Equus_asinus_asinus
ENSEEUG00000002962PABPC410096.364ENSECAG00000009396PABPC410096.364Equus_caballus
ENSEEUG00000002962PABPC49978.539ENSELUG00000003195pabpc49779.109Esox_lucius
ENSEEUG00000002962PABPC410096.061ENSFCAG00000015254-10096.061Felis_catus
ENSEEUG00000002962PABPC49985.129ENSFALG00000000543PABPC49885.471Ficedula_albicollis
ENSEEUG00000002962PABPC49064.815ENSFDAG00000010581-9860.206Fukomys_damarensis
ENSEEUG00000002962PABPC410096.212ENSFDAG00000020016-10096.212Fukomys_damarensis
ENSEEUG00000002962PABPC410078.144ENSFHEG00000007548pabpc49779.294Fundulus_heteroclitus
ENSEEUG00000002962PABPC49978.130ENSGMOG00000019025pabpc49779.173Gadus_morhua
ENSEEUG00000002962PABPC49985.736ENSGALG00000003800PABPC49886.090Gallus_gallus
ENSEEUG00000002962PABPC410078.228ENSGAFG00000018195pabpc49895.000Gambusia_affinis
ENSEEUG00000002962PABPC410077.280ENSGACG00000007179pabpc49778.407Gasterosteus_aculeatus
ENSEEUG00000002962PABPC49985.432ENSGAGG00000001888PABPC49885.781Gopherus_agassizii
ENSEEUG00000002962PABPC410096.212ENSGGOG00000004002PABPC410096.212Gorilla_gorilla
ENSEEUG00000002962PABPC410078.326ENSHBUG00000020206pabpc49779.294Haplochromis_burtoni
ENSEEUG00000002962PABPC410096.364ENSHGLG00000011162PABPC410096.364Heterocephalus_glaber_female
ENSEEUG00000002962PABPC410093.939ENSHGLG00100001580PABPC410093.939Heterocephalus_glaber_male
ENSEEUG00000002962PABPC410078.144ENSHCOG00000012694pabpc49779.263Hippocampus_comes
ENSEEUG00000002962PABPC49879.141ENSIPUG00000016620pabpc49879.141Ictalurus_punctatus
ENSEEUG00000002962PABPC410093.939ENSSTOG00000010416PABPC410093.939Ictidomys_tridecemlineatus
ENSEEUG00000002962PABPC410091.818ENSJJAG00000007781Pabpc410091.818Jaculus_jaculus
ENSEEUG00000002962PABPC49977.744ENSKMAG00000013597pabpc49778.254Kryptolebias_marmoratus
ENSEEUG00000002962PABPC410077.794ENSLBEG00000013654pabpc49778.560Labrus_bergylta
ENSEEUG00000002962PABPC49982.353ENSLACG00000011907PABPC49882.642Latimeria_chalumnae
ENSEEUG00000002962PABPC49980.572ENSLOCG00000001877pabpc49781.720Lepisosteus_oculatus
ENSEEUG00000002962PABPC410096.212ENSLAFG00000000151PABPC410096.212Loxodonta_africana
ENSEEUG00000002962PABPC410096.364ENSMFAG00000041481PABPC410096.364Macaca_fascicularis
ENSEEUG00000002962PABPC410096.364ENSMMUG00000007497PABPC410096.364Macaca_mulatta
ENSEEUG00000002962PABPC410096.364ENSMNEG00000043054PABPC410096.364Macaca_nemestrina
ENSEEUG00000002962PABPC410096.364ENSMLEG00000040716PABPC410096.364Mandrillus_leucophaeus
ENSEEUG00000002962PABPC49978.182ENSMAMG00000010025pabpc49879.213Mastacembelus_armatus
ENSEEUG00000002962PABPC410078.027ENSMZEG00005006141pabpc48892.135Maylandia_zebra
ENSEEUG00000002962PABPC49984.899ENSMGAG00000005408PABPC49885.274Meleagris_gallopavo
ENSEEUG00000002962PABPC45581.176ENSMAUG00000004089-9281.176Mesocricetus_auratus
ENSEEUG00000002962PABPC46884.615ENSMAUG00000001295-9784.615Mesocricetus_auratus
ENSEEUG00000002962PABPC47493.396ENSMAUG00000019763-8293.137Mesocricetus_auratus
ENSEEUG00000002962PABPC48992.203ENSMICG00000016633-10092.203Microcebus_murinus
ENSEEUG00000002962PABPC49972.835ENSMICG00000036729-10073.773Microcebus_murinus
ENSEEUG00000002962PABPC410094.729ENSMOCG00000006763Pabpc410094.729Microtus_ochrogaster
ENSEEUG00000002962PABPC410074.074ENSMMOG00000002363pabpc49774.848Mola_mola
ENSEEUG00000002962PABPC46280.769ENSMODG00000019847-6880.769Monodelphis_domestica
ENSEEUG00000002962PABPC49887.346ENSMODG00000017657-9887.346Monodelphis_domestica
ENSEEUG00000002962PABPC45672.881ENSMODG00000018051-9172.881Monodelphis_domestica
ENSEEUG00000002962PABPC49977.795ENSMALG00000011017pabpc49778.593Monopterus_albus
ENSEEUG00000002962PABPC49981.726MGP_CAROLIEiJ_G0024864-10081.726Mus_caroli
ENSEEUG00000002962PABPC410094.242MGP_CAROLIEiJ_G0026435-10098.582Mus_caroli
ENSEEUG00000002962PABPC410094.697ENSMUSG00000011257Pabpc410098.810Mus_musculus
ENSEEUG00000002962PABPC49994.470MGP_PahariEiJ_G0028765Pabpc410099.291Mus_pahari
ENSEEUG00000002962PABPC49975.632MGP_SPRETEiJ_G0027415Pabpc410098.582Mus_spretus
ENSEEUG00000002962PABPC410096.061ENSMPUG00000014414-10096.061Mustela_putorius_furo
ENSEEUG00000002962PABPC49549.921ENSMPUG00000006836-10049.763Mustela_putorius_furo
ENSEEUG00000002962PABPC410089.091ENSMLUG00000012068PABPC410089.091Myotis_lucifugus
ENSEEUG00000002962PABPC410093.333ENSNGAG00000018292Pabpc410093.333Nannospalax_galili
ENSEEUG00000002962PABPC46486.286ENSNBRG00000010047-7586.286Neolamprologus_brichardi
ENSEEUG00000002962PABPC45792.308ENSNBRG00000009708pabpc49892.308Neolamprologus_brichardi
ENSEEUG00000002962PABPC410093.939ENSNLEG00000011928PABPC410093.939Nomascus_leucogenys
ENSEEUG00000002962PABPC48195.789ENSOPRG00000011984PABPC48795.789Ochotona_princeps
ENSEEUG00000002962PABPC45185.612ENSODEG00000013457-10085.612Octodon_degus
ENSEEUG00000002962PABPC410095.455ENSODEG00000006592-10095.455Octodon_degus
ENSEEUG00000002962PABPC49985.832ENSODEG00000017434-9785.177Octodon_degus
ENSEEUG00000002962PABPC410078.027ENSONIG00000008176pabpc49778.681Oreochromis_niloticus
ENSEEUG00000002962PABPC49985.888ENSOANG00000010001PABPC49886.244Ornithorhynchus_anatinus
ENSEEUG00000002962PABPC49696.361ENSOCUG00000000562PABPC48896.361Oryctolagus_cuniculus
ENSEEUG00000002962PABPC49990.123ENSORLG00000017479pabpc49690.123Oryzias_latipes
ENSEEUG00000002962PABPC49990.123ENSORLG00020018644pabpc49690.123Oryzias_latipes_hni
ENSEEUG00000002962PABPC49990.123ENSORLG00015015042pabpc49690.123Oryzias_latipes_hsok
ENSEEUG00000002962PABPC49977.879ENSOMEG00000014410pabpc49781.905Oryzias_melastigma
ENSEEUG00000002962PABPC410093.665ENSOGAG00000004067PABPC410093.665Otolemur_garnettii
ENSEEUG00000002962PABPC410095.909ENSOARG00000020060PABPC410095.909Ovis_aries
ENSEEUG00000002962PABPC410096.212ENSPPAG00000043625PABPC410096.212Pan_paniscus
ENSEEUG00000002962PABPC410096.061ENSPPRG00000024727PABPC410096.061Panthera_pardus
ENSEEUG00000002962PABPC410096.061ENSPTIG00000005829PABPC410096.061Panthera_tigris_altaica
ENSEEUG00000002962PABPC410096.212ENSPTRG00000000573PABPC410096.212Pan_troglodytes
ENSEEUG00000002962PABPC410096.212ENSPANG00000009484PABPC410096.212Papio_anubis
ENSEEUG00000002962PABPC49979.879ENSPKIG00000025356pabpc49880.472Paramormyrops_kingsleyae
ENSEEUG00000002962PABPC49985.584ENSPSIG00000016892PABPC49885.935Pelodiscus_sinensis
ENSEEUG00000002962PABPC410076.807ENSPMGG00000009073pabpc49776.471Periophthalmus_magnuspinnatus
ENSEEUG00000002962PABPC410094.242ENSPEMG00000023569-9894.745Peromyscus_maniculatus_bairdii
ENSEEUG00000002962PABPC410088.030ENSPEMG00000024193-9888.408Peromyscus_maniculatus_bairdii
ENSEEUG00000002962PABPC49666.151ENSPMAG00000007885pabpc49865.010Petromyzon_marinus
ENSEEUG00000002962PABPC48969.967ENSPMAG00000002836pabpc410070.297Petromyzon_marinus
ENSEEUG00000002962PABPC49886.553ENSPCIG00000020674PABPC49889.171Phascolarctos_cinereus
ENSEEUG00000002962PABPC410077.545ENSPFOG00000002682pabpc49778.528Poecilia_formosa
ENSEEUG00000002962PABPC410077.246ENSPLAG00000010112pabpc49778.988Poecilia_latipinna
ENSEEUG00000002962PABPC49977.964ENSPMEG00000019739pabpc49778.528Poecilia_mexicana
ENSEEUG00000002962PABPC410077.844ENSPREG00000001589pabpc49778.988Poecilia_reticulata
ENSEEUG00000002962PABPC410096.212ENSPPYG00000001506PABPC410096.212Pongo_abelii
ENSEEUG00000002962PABPC410091.667ENSPCAG00000003341PABPC410091.667Procavia_capensis
ENSEEUG00000002962PABPC410096.369ENSPCOG00000023725-10096.369Propithecus_coquereli
ENSEEUG00000002962PABPC49979.252ENSPCOG00000025882-9892.079Propithecus_coquereli
ENSEEUG00000002962PABPC49995.294ENSPVAG00000002187PABPC410095.294Pteropus_vampyrus
ENSEEUG00000002962PABPC410078.176ENSPNYG00000006134pabpc49779.141Pundamilia_nyererei
ENSEEUG00000002962PABPC410078.443ENSPNAG00000024355pabpc49879.632Pygocentrus_nattereri
ENSEEUG00000002962PABPC410092.424ENSRNOG00000015642Pabpc410092.424Rattus_norvegicus
ENSEEUG00000002962PABPC410090.606ENSRNOG00000028592AABR07035074.110090.606Rattus_norvegicus
ENSEEUG00000002962PABPC410096.364ENSRBIG00000039761PABPC410096.364Rhinopithecus_bieti
ENSEEUG00000002962PABPC410096.364ENSRROG00000033355PABPC410096.364Rhinopithecus_roxellana
ENSEEUG00000002962PABPC410095.909ENSSBOG00000026193PABPC410095.909Saimiri_boliviensis_boliviensis
ENSEEUG00000002962PABPC49886.399ENSSHAG00000018139PABPC49886.399Sarcophilus_harrisii
ENSEEUG00000002962PABPC49980.408ENSSFOG00015023514pabpc49780.702Scleropages_formosus
ENSEEUG00000002962PABPC49977.761ENSSMAG00000009007pabpc49778.221Scophthalmus_maximus
ENSEEUG00000002962PABPC49977.879ENSSDUG00000012683pabpc49090.024Seriola_dumerili
ENSEEUG00000002962PABPC49977.879ENSSLDG00000013025pabpc48990.024Seriola_lalandi_dorsalis
ENSEEUG00000002962PABPC410088.788ENSSARG00000000310PABPC410088.788Sorex_araneus
ENSEEUG00000002962PABPC49985.281ENSSPUG00000003204PABPC49885.471Sphenodon_punctatus
ENSEEUG00000002962PABPC49978.517ENSSPAG00000009252pabpc49778.571Stegastes_partitus
ENSEEUG00000002962PABPC48948.567ENSSSCG00000036170-9648.567Sus_scrofa
ENSEEUG00000002962PABPC410095.909ENSSSCG00000003660-10095.909Sus_scrofa
ENSEEUG00000002962PABPC49985.628ENSTGUG00000001266PABPC49885.978Taeniopygia_guttata
ENSEEUG00000002962PABPC410077.395ENSTRUG00000005907pabpc49778.407Takifugu_rubripes
ENSEEUG00000002962PABPC410075.492ENSTNIG00000016902pabpc49775.926Tetraodon_nigroviridis
ENSEEUG00000002962PABPC49985.210ENSTBEG00000009035PABPC410085.210Tupaia_belangeri
ENSEEUG00000002962PABPC49979.885ENSTTRG00000014340PABPC410083.866Tursiops_truncatus
ENSEEUG00000002962PABPC410095.909ENSUAMG00000000303PABPC410095.909Ursus_americanus
ENSEEUG00000002962PABPC410095.758ENSUMAG00000019585PABPC410097.436Ursus_maritimus
ENSEEUG00000002962PABPC48492.857ENSVPAG00000010041PABPC47389.362Vicugna_pacos
ENSEEUG00000002962PABPC410095.909ENSVVUG00000005215PABPC410095.909Vulpes_vulpes
ENSEEUG00000002962PABPC45696.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSEEUG00000002962PABPC49978.907ENSXETG00000010946pabpc49879.289Xenopus_tropicalis
ENSEEUG00000002962PABPC48789.037ENSXCOG00000013190pabpc49690.566Xiphophorus_couchianus
ENSEEUG00000002962PABPC410077.994ENSXMAG00000019007pabpc49779.141Xiphophorus_maculatus

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