EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000003123 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 22051 bases
Position: chrGeneScaffold_1183:538-22588
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000002863	zf-C3HC	PF07967.13	2.6e-23	1	1
ENSEEUP00000002863	Rsm1	PF08600.10	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003122	ZC3HC1-201	1509	-	ENSEEUP00000002863	502 (aa)	-	UPI0000F61E7E

Gene Model

Click here to download ENSEEUG00000003123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003123's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003123	ZC3HC1	83	85.093	ENSG00000091732	ZC3HC1	98	85.417	Homo_sapiens
ENSEEUG00000003123	ZC3HC1	78	39.149	ENSAPOG00000009078	zc3hc1	77	39.574	Acanthochromis_polyacanthus
ENSEEUG00000003123	ZC3HC1	84	83.333	ENSAMEG00000005425	ZC3HC1	84	83.333	Ailuropoda_melanoleuca
ENSEEUG00000003123	ZC3HC1	76	38.723	ENSACIG00000019513	zc3hc1	75	39.149	Amphilophus_citrinellus
ENSEEUG00000003123	ZC3HC1	78	38.889	ENSAOCG00000024310	zc3hc1	77	39.149	Amphiprion_ocellaris
ENSEEUG00000003123	ZC3HC1	78	38.889	ENSAPEG00000004907	zc3hc1	77	39.149	Amphiprion_percula
ENSEEUG00000003123	ZC3HC1	60	49.112	ENSATEG00000016898	zc3hc1	61	48.235	Anabas_testudineus
ENSEEUG00000003123	ZC3HC1	66	59.375	ENSAPLG00000003832	ZC3HC1	76	59.375	Anas_platyrhynchos
ENSEEUG00000003123	ZC3HC1	78	63.253	ENSACAG00000001638	ZC3HC1	78	63.253	Anolis_carolinensis
ENSEEUG00000003123	ZC3HC1	84	86.420	ENSANAG00000022213	ZC3HC1	84	86.420	Aotus_nancymaae
ENSEEUG00000003123	ZC3HC1	65	48.824	ENSACLG00000025033	zc3hc1	70	48.824	Astatotilapia_calliptera
ENSEEUG00000003123	ZC3HC1	77	39.485	ENSAMXG00000036792	zc3hc1	83	39.056	Astyanax_mexicanus
ENSEEUG00000003123	ZC3HC1	84	82.716	ENSBTAG00000011247	ZC3HC1	84	82.716	Bos_taurus
ENSEEUG00000003123	ZC3HC1	84	85.802	ENSCJAG00000010536	ZC3HC1	84	85.802	Callithrix_jacchus
ENSEEUG00000003123	ZC3HC1	84	82.099	ENSCAFG00000001499	-	83	82.099	Canis_familiaris
ENSEEUG00000003123	ZC3HC1	84	82.716	ENSCAFG00000029401	-	83	82.716	Canis_familiaris
ENSEEUG00000003123	ZC3HC1	84	82.716	ENSCAFG00000031850	-	84	82.716	Canis_familiaris
ENSEEUG00000003123	ZC3HC1	84	82.716	ENSCAFG00000028735	-	84	82.716	Canis_familiaris
ENSEEUG00000003123	ZC3HC1	84	82.099	ENSCAFG00020023333	-	84	82.099	Canis_lupus_dingo
ENSEEUG00000003123	ZC3HC1	84	82.716	ENSCAFG00020006829	-	84	82.716	Canis_lupus_dingo
ENSEEUG00000003123	ZC3HC1	84	82.099	ENSCHIG00000014103	ZC3HC1	83	82.099	Capra_hircus
ENSEEUG00000003123	ZC3HC1	84	80.864	ENSTSYG00000002843	ZC3HC1	84	80.864	Carlito_syrichta
ENSEEUG00000003123	ZC3HC1	52	73.457	ENSCAPG00000016300	ZC3HC1	65	71.605	Cavia_aperea
ENSEEUG00000003123	ZC3HC1	84	73.457	ENSCPOG00000014034	ZC3HC1	84	72.222	Cavia_porcellus
ENSEEUG00000003123	ZC3HC1	66	87.500	ENSCCAG00000020384	ZC3HC1	78	84.568	Cebus_capucinus
ENSEEUG00000003123	ZC3HC1	84	83.951	ENSCATG00000023130	ZC3HC1	84	83.951	Cercocebus_atys
ENSEEUG00000003123	ZC3HC1	84	76.543	ENSCLAG00000008260	ZC3HC1	90	75.309	Chinchilla_lanigera
ENSEEUG00000003123	ZC3HC1	56	87.603	ENSCSAG00000009881	ZC3HC1	75	87.603	Chlorocebus_sabaeus
ENSEEUG00000003123	ZC3HC1	66	80.503	ENSCHOG00000011846	ZC3HC1	73	80.503	Choloepus_hoffmanni
ENSEEUG00000003123	ZC3HC1	80	64.198	ENSCPBG00000017519	ZC3HC1	83	64.198	Chrysemys_picta_bellii
ENSEEUG00000003123	ZC3HC1	84	84.568	ENSCANG00000029091	ZC3HC1	84	84.568	Colobus_angolensis_palliatus
ENSEEUG00000003123	ZC3HC1	84	82.099	ENSCGRG00001018805	Zc3hc1	84	82.099	Cricetulus_griseus_chok1gshd
ENSEEUG00000003123	ZC3HC1	84	82.099	ENSCGRG00000017114	Zc3hc1	84	82.099	Cricetulus_griseus_crigri
ENSEEUG00000003123	ZC3HC1	78	38.397	ENSCSEG00000009284	zc3hc1	74	38.397	Cynoglossus_semilaevis
ENSEEUG00000003123	ZC3HC1	65	47.647	ENSCVAG00000011566	zc3hc1	64	47.647	Cyprinodon_variegatus
ENSEEUG00000003123	ZC3HC1	76	47.059	ENSDARG00000062651	zc3hc1	77	46.405	Danio_rerio
ENSEEUG00000003123	ZC3HC1	83	81.366	ENSDNOG00000045016	ZC3HC1	83	81.366	Dasypus_novemcinctus
ENSEEUG00000003123	ZC3HC1	83	78.882	ENSDORG00000008697	Zc3hc1	82	78.882	Dipodomys_ordii
ENSEEUG00000003123	ZC3HC1	67	86.420	ENSEASG00005008789	ZC3HC1	72	86.420	Equus_asinus_asinus
ENSEEUG00000003123	ZC3HC1	84	87.037	ENSECAG00000017886	ZC3HC1	84	87.037	Equus_caballus
ENSEEUG00000003123	ZC3HC1	65	49.412	ENSELUG00000023168	zc3hc1	64	49.412	Esox_lucius
ENSEEUG00000003123	ZC3HC1	84	82.716	ENSFCAG00000010429	ZC3HC1	84	82.716	Felis_catus
ENSEEUG00000003123	ZC3HC1	66	61.111	ENSFALG00000005006	ZC3HC1	73	61.111	Ficedula_albicollis
ENSEEUG00000003123	ZC3HC1	84	77.160	ENSFDAG00000019897	ZC3HC1	84	77.160	Fukomys_damarensis
ENSEEUG00000003123	ZC3HC1	66	47.059	ENSFHEG00000020149	zc3hc1	65	47.059	Fundulus_heteroclitus
ENSEEUG00000003123	ZC3HC1	63	48.824	ENSGMOG00000002914	zc3hc1	64	48.235	Gadus_morhua
ENSEEUG00000003123	ZC3HC1	81	58.125	ENSGALG00000008003	ZC3HC1	83	58.125	Gallus_gallus
ENSEEUG00000003123	ZC3HC1	66	47.059	ENSGAFG00000016095	zc3hc1	65	47.647	Gambusia_affinis
ENSEEUG00000003123	ZC3HC1	65	48.824	ENSGACG00000019706	zc3hc1	65	49.412	Gasterosteus_aculeatus
ENSEEUG00000003123	ZC3HC1	61	67.586	ENSGAGG00000016106	ZC3HC1	78	67.586	Gopherus_agassizii
ENSEEUG00000003123	ZC3HC1	83	85.093	ENSGGOG00000015504	ZC3HC1	83	85.093	Gorilla_gorilla
ENSEEUG00000003123	ZC3HC1	65	48.824	ENSHBUG00000008347	zc3hc1	64	48.824	Haplochromis_burtoni
ENSEEUG00000003123	ZC3HC1	84	79.630	ENSHGLG00000005085	ZC3HC1	84	79.630	Heterocephalus_glaber_female
ENSEEUG00000003123	ZC3HC1	84	79.012	ENSHGLG00100011395	ZC3HC1	84	79.012	Heterocephalus_glaber_male
ENSEEUG00000003123	ZC3HC1	71	39.149	ENSHCOG00000014309	zc3hc1	76	38.298	Hippocampus_comes
ENSEEUG00000003123	ZC3HC1	84	81.481	ENSSTOG00000023599	-	92	81.481	Ictidomys_tridecemlineatus
ENSEEUG00000003123	ZC3HC1	76	39.565	ENSKMAG00000015315	zc3hc1	70	40.000	Kryptolebias_marmoratus
ENSEEUG00000003123	ZC3HC1	65	50.000	ENSLBEG00000017325	zc3hc1	68	49.123	Labrus_bergylta
ENSEEUG00000003123	ZC3HC1	62	55.714	ENSLACG00000013032	ZC3HC1	77	55.714	Latimeria_chalumnae
ENSEEUG00000003123	ZC3HC1	78	45.570	ENSLOCG00000015963	zc3hc1	80	46.988	Lepisosteus_oculatus
ENSEEUG00000003123	ZC3HC1	84	80.864	ENSLAFG00000001292	ZC3HC1	83	80.864	Loxodonta_africana
ENSEEUG00000003123	ZC3HC1	84	84.568	ENSMFAG00000030176	ZC3HC1	84	84.568	Macaca_fascicularis
ENSEEUG00000003123	ZC3HC1	84	84.568	ENSMMUG00000006155	ZC3HC1	84	84.568	Macaca_mulatta
ENSEEUG00000003123	ZC3HC1	84	85.185	ENSMNEG00000011833	ZC3HC1	84	85.185	Macaca_nemestrina
ENSEEUG00000003123	ZC3HC1	84	84.568	ENSMLEG00000027328	ZC3HC1	84	84.568	Mandrillus_leucophaeus
ENSEEUG00000003123	ZC3HC1	78	40.084	ENSMAMG00000010691	zc3hc1	77	40.084	Mastacembelus_armatus
ENSEEUG00000003123	ZC3HC1	65	48.824	ENSMZEG00005007142	zc3hc1	64	48.824	Maylandia_zebra
ENSEEUG00000003123	ZC3HC1	78	63.910	ENSMGAG00000002977	ZC3HC1	83	60.510	Meleagris_gallopavo
ENSEEUG00000003123	ZC3HC1	65	80.247	ENSMAUG00000017032	Zc3hc1	73	80.247	Mesocricetus_auratus
ENSEEUG00000003123	ZC3HC1	83	82.609	ENSMICG00000009167	ZC3HC1	83	82.609	Microcebus_murinus
ENSEEUG00000003123	ZC3HC1	84	80.247	ENSMOCG00000015239	Zc3hc1	84	80.247	Microtus_ochrogaster
ENSEEUG00000003123	ZC3HC1	64	48.824	ENSMMOG00000002204	zc3hc1	73	48.824	Mola_mola
ENSEEUG00000003123	ZC3HC1	66	71.605	ENSMODG00000014630	ZC3HC1	74	71.605	Monodelphis_domestica
ENSEEUG00000003123	ZC3HC1	63	48.824	ENSMALG00000014447	zc3hc1	63	48.824	Monopterus_albus
ENSEEUG00000003123	ZC3HC1	84	78.395	MGP_CAROLIEiJ_G0028183	Zc3hc1	91	78.395	Mus_caroli
ENSEEUG00000003123	ZC3HC1	84	77.778	ENSMUSG00000039130	Zc3hc1	92	77.778	Mus_musculus
ENSEEUG00000003123	ZC3HC1	84	77.160	MGP_PahariEiJ_G0021941	Zc3hc1	91	77.160	Mus_pahari
ENSEEUG00000003123	ZC3HC1	84	77.160	MGP_SPRETEiJ_G0029183	Zc3hc1	92	77.160	Mus_spretus
ENSEEUG00000003123	ZC3HC1	79	81.295	ENSMPUG00000005297	ZC3HC1	79	81.295	Mustela_putorius_furo
ENSEEUG00000003123	ZC3HC1	84	82.716	ENSMLUG00000000063	-	84	82.716	Myotis_lucifugus
ENSEEUG00000003123	ZC3HC1	51	85.263	ENSMLUG00000029228	-	76	85.567	Myotis_lucifugus
ENSEEUG00000003123	ZC3HC1	84	81.595	ENSNGAG00000019014	Zc3hc1	84	81.595	Nannospalax_galili
ENSEEUG00000003123	ZC3HC1	65	48.824	ENSNBRG00000004577	zc3hc1	64	48.824	Neolamprologus_brichardi
ENSEEUG00000003123	ZC3HC1	83	83.230	ENSNLEG00000012698	ZC3HC1	83	83.230	Nomascus_leucogenys
ENSEEUG00000003123	ZC3HC1	82	72.671	ENSMEUG00000011023	ZC3HC1	82	72.671	Notamacropus_eugenii
ENSEEUG00000003123	ZC3HC1	65	64.729	ENSOPRG00000007867	-	67	64.729	Ochotona_princeps
ENSEEUG00000003123	ZC3HC1	84	74.074	ENSODEG00000014604	ZC3HC1	84	73.457	Octodon_degus
ENSEEUG00000003123	ZC3HC1	65	49.412	ENSONIG00000011644	zc3hc1	64	49.412	Oreochromis_niloticus
ENSEEUG00000003123	ZC3HC1	66	70.186	ENSOANG00000011460	ZC3HC1	73	70.186	Ornithorhynchus_anatinus
ENSEEUG00000003123	ZC3HC1	83	75.155	ENSOCUG00000017137	ZC3HC1	84	75.155	Oryctolagus_cuniculus
ENSEEUG00000003123	ZC3HC1	78	38.983	ENSORLG00000014409	zc3hc1	76	38.983	Oryzias_latipes
ENSEEUG00000003123	ZC3HC1	78	39.407	ENSORLG00020015874	zc3hc1	76	39.407	Oryzias_latipes_hni
ENSEEUG00000003123	ZC3HC1	78	39.407	ENSORLG00015014641	zc3hc1	76	39.407	Oryzias_latipes_hsok
ENSEEUG00000003123	ZC3HC1	78	39.407	ENSOMEG00000000215	zc3hc1	81	39.407	Oryzias_melastigma
ENSEEUG00000003123	ZC3HC1	78	39.407	ENSOMEG00000020604	zc3hc1	81	39.407	Oryzias_melastigma
ENSEEUG00000003123	ZC3HC1	83	82.716	ENSOGAG00000026193	ZC3HC1	83	82.716	Otolemur_garnettii
ENSEEUG00000003123	ZC3HC1	84	82.716	ENSOARG00000004907	ZC3HC1	83	82.716	Ovis_aries
ENSEEUG00000003123	ZC3HC1	83	85.093	ENSPPAG00000043172	ZC3HC1	83	85.093	Pan_paniscus
ENSEEUG00000003123	ZC3HC1	84	80.864	ENSPPRG00000001004	ZC3HC1	84	80.864	Panthera_pardus
ENSEEUG00000003123	ZC3HC1	84	82.099	ENSPTIG00000007823	ZC3HC1	84	82.099	Panthera_tigris_altaica
ENSEEUG00000003123	ZC3HC1	83	85.093	ENSPTRG00000019685	ZC3HC1	83	85.093	Pan_troglodytes
ENSEEUG00000003123	ZC3HC1	84	84.568	ENSPANG00000014229	ZC3HC1	84	84.568	Papio_anubis
ENSEEUG00000003123	ZC3HC1	78	42.331	ENSPKIG00000007172	zc3hc1	79	42.331	Paramormyrops_kingsleyae
ENSEEUG00000003123	ZC3HC1	64	66.860	ENSPSIG00000016646	ZC3HC1	81	56.024	Pelodiscus_sinensis
ENSEEUG00000003123	ZC3HC1	76	38.298	ENSPMGG00000003548	zc3hc1	79	39.149	Periophthalmus_magnuspinnatus
ENSEEUG00000003123	ZC3HC1	84	78.395	ENSPEMG00000000514	Zc3hc1	84	78.395	Peromyscus_maniculatus_bairdii
ENSEEUG00000003123	ZC3HC1	81	72.050	ENSPCIG00000020619	ZC3HC1	80	72.050	Phascolarctos_cinereus
ENSEEUG00000003123	ZC3HC1	66	46.471	ENSPFOG00000003466	zc3hc1	65	47.059	Poecilia_formosa
ENSEEUG00000003123	ZC3HC1	66	47.059	ENSPLAG00000022211	zc3hc1	65	47.059	Poecilia_latipinna
ENSEEUG00000003123	ZC3HC1	66	46.471	ENSPMEG00000001458	zc3hc1	70	47.059	Poecilia_mexicana
ENSEEUG00000003123	ZC3HC1	66	47.059	ENSPREG00000004004	zc3hc1	65	47.647	Poecilia_reticulata
ENSEEUG00000003123	ZC3HC1	83	83.851	ENSPPYG00000017998	ZC3HC1	83	83.851	Pongo_abelii
ENSEEUG00000003123	ZC3HC1	67	79.630	ENSPCAG00000001182	ZC3HC1	72	79.630	Procavia_capensis
ENSEEUG00000003123	ZC3HC1	84	83.951	ENSPCOG00000017354	ZC3HC1	84	83.951	Propithecus_coquereli
ENSEEUG00000003123	ZC3HC1	81	82.716	ENSPVAG00000003195	ZC3HC1	81	82.716	Pteropus_vampyrus
ENSEEUG00000003123	ZC3HC1	65	48.824	ENSPNYG00000020692	zc3hc1	64	48.824	Pundamilia_nyererei
ENSEEUG00000003123	ZC3HC1	76	40.435	ENSPNAG00000020746	zc3hc1	82	39.565	Pygocentrus_nattereri
ENSEEUG00000003123	ZC3HC1	84	79.012	ENSRNOG00000010154	Zc3hc1	84	79.012	Rattus_norvegicus
ENSEEUG00000003123	ZC3HC1	67	84.568	ENSRBIG00000029409	ZC3HC1	76	87.500	Rhinopithecus_bieti
ENSEEUG00000003123	ZC3HC1	84	84.568	ENSRROG00000041831	ZC3HC1	84	84.568	Rhinopithecus_roxellana
ENSEEUG00000003123	ZC3HC1	69	85.185	ENSSBOG00000032787	ZC3HC1	80	85.185	Saimiri_boliviensis_boliviensis
ENSEEUG00000003123	ZC3HC1	66	74.419	ENSSHAG00000002529	ZC3HC1	72	74.419	Sarcophilus_harrisii
ENSEEUG00000003123	ZC3HC1	78	48.171	ENSSFOG00015003667	zc3hc1	76	47.561	Scleropages_formosus
ENSEEUG00000003123	ZC3HC1	66	49.412	ENSSMAG00000000647	zc3hc1	58	50.000	Scophthalmus_maximus
ENSEEUG00000003123	ZC3HC1	65	50.588	ENSSDUG00000004241	zc3hc1	75	40.000	Seriola_dumerili
ENSEEUG00000003123	ZC3HC1	65	50.000	ENSSLDG00000025056	zc3hc1	63	50.588	Seriola_lalandi_dorsalis
ENSEEUG00000003123	ZC3HC1	83	77.778	ENSSARG00000012013	ZC3HC1	83	77.778	Sorex_araneus
ENSEEUG00000003123	ZC3HC1	62	65.318	ENSSPUG00000000778	ZC3HC1	70	65.318	Sphenodon_punctatus
ENSEEUG00000003123	ZC3HC1	78	39.574	ENSSPAG00000020041	zc3hc1	77	40.000	Stegastes_partitus
ENSEEUG00000003123	ZC3HC1	84	82.099	ENSSSCG00000016565	ZC3HC1	84	82.099	Sus_scrofa
ENSEEUG00000003123	ZC3HC1	65	48.521	ENSTRUG00000020077	zc3hc1	65	48.521	Takifugu_rubripes
ENSEEUG00000003123	ZC3HC1	77	39.130	ENSTNIG00000007585	zc3hc1	68	49.704	Tetraodon_nigroviridis
ENSEEUG00000003123	ZC3HC1	66	87.500	ENSTBEG00000005216	ZC3HC1	66	87.500	Tupaia_belangeri
ENSEEUG00000003123	ZC3HC1	79	83.333	ENSTTRG00000008458	ZC3HC1	83	83.333	Tursiops_truncatus
ENSEEUG00000003123	ZC3HC1	84	83.333	ENSUAMG00000020249	ZC3HC1	84	83.333	Ursus_americanus
ENSEEUG00000003123	ZC3HC1	84	81.481	ENSUMAG00000009268	ZC3HC1	84	81.481	Ursus_maritimus
ENSEEUG00000003123	ZC3HC1	61	79.592	ENSVPAG00000010846	ZC3HC1	61	79.592	Vicugna_pacos
ENSEEUG00000003123	ZC3HC1	79	79.286	ENSVVUG00000012386	ZC3HC1	83	79.286	Vulpes_vulpes
ENSEEUG00000003123	ZC3HC1	74	52.174	ENSXETG00000033900	zc3hc1	80	52.174	Xenopus_tropicalis
ENSEEUG00000003123	ZC3HC1	64	47.273	ENSXCOG00000013570	zc3hc1	64	47.273	Xiphophorus_couchianus
ENSEEUG00000003123	ZC3HC1	65	47.647	ENSXMAG00000010979	zc3hc1	69	47.647	Xiphophorus_maculatus