EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000003194 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 26652 bases
Position: chrGeneScaffold_6660:4971-31622
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000002953	CPSF_A	PF03178.15	1.2e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003224	DDB1-201	3417	-	ENSEEUP00000002953	1138 (aa)	-	UPI0000F61F4E

Gene Model

Click here to download ENSEEUG00000003194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003194's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003194	DDB1	85	97.475	ENSG00000167986	DDB1	89	97.475	Homo_sapiens
ENSEEUG00000003194	DDB1	85	87.374	ENSAPOG00000005036	ddb1	90	86.667	Acanthochromis_polyacanthus
ENSEEUG00000003194	DDB1	85	97.643	ENSAMEG00000016518	DDB1	85	97.643	Ailuropoda_melanoleuca
ENSEEUG00000003194	DDB1	78	87.059	ENSACIG00000020624	ddb1	90	87.059	Amphilophus_citrinellus
ENSEEUG00000003194	DDB1	85	87.205	ENSAOCG00000003066	ddb1	85	87.205	Amphiprion_ocellaris
ENSEEUG00000003194	DDB1	85	87.205	ENSAPEG00000000092	ddb1	89	87.205	Amphiprion_percula
ENSEEUG00000003194	DDB1	85	87.879	ENSATEG00000020571	ddb1	88	87.879	Anabas_testudineus
ENSEEUG00000003194	DDB1	79	94.949	ENSAPLG00000007174	DDB1	79	94.949	Anas_platyrhynchos
ENSEEUG00000003194	DDB1	85	94.444	ENSACAG00000017758	DDB1	85	94.444	Anolis_carolinensis
ENSEEUG00000003194	DDB1	85	97.475	ENSANAG00000021878	DDB1	85	97.475	Aotus_nancymaae
ENSEEUG00000003194	DDB1	85	87.710	ENSACLG00000012401	ddb1	85	87.710	Astatotilapia_calliptera
ENSEEUG00000003194	DDB1	85	97.306	ENSBTAG00000021569	DDB1	79	97.306	Bos_taurus
ENSEEUG00000003194	DDB1	78	36.378	WBGene00010890	ddb-1	78	35.691	Caenorhabditis_elegans
ENSEEUG00000003194	DDB1	85	97.475	ENSCJAG00000019319	DDB1	85	97.475	Callithrix_jacchus
ENSEEUG00000003194	DDB1	85	97.643	ENSCAFG00000016264	DDB1	89	97.643	Canis_familiaris
ENSEEUG00000003194	DDB1	85	97.643	ENSCAFG00020012722	DDB1	89	97.643	Canis_lupus_dingo
ENSEEUG00000003194	DDB1	85	97.306	ENSCHIG00000014969	DDB1	85	97.306	Capra_hircus
ENSEEUG00000003194	DDB1	85	96.633	ENSTSYG00000008027	DDB1	85	96.633	Carlito_syrichta
ENSEEUG00000003194	DDB1	79	96.970	ENSCAPG00000010786	DDB1	80	96.970	Cavia_aperea
ENSEEUG00000003194	DDB1	85	96.970	ENSCPOG00000009956	DDB1	85	96.970	Cavia_porcellus
ENSEEUG00000003194	DDB1	85	97.475	ENSCCAG00000035883	DDB1	85	97.475	Cebus_capucinus
ENSEEUG00000003194	DDB1	85	96.633	ENSCATG00000044495	DDB1	84	96.633	Cercocebus_atys
ENSEEUG00000003194	DDB1	85	96.970	ENSCLAG00000004126	DDB1	85	96.970	Chinchilla_lanigera
ENSEEUG00000003194	DDB1	85	97.475	ENSCSAG00000006392	DDB1	85	97.475	Chlorocebus_sabaeus
ENSEEUG00000003194	DDB1	75	89.144	ENSCHOG00000011377	DDB1	76	89.144	Choloepus_hoffmanni
ENSEEUG00000003194	DDB1	85	95.286	ENSCPBG00000017728	DDB1	85	95.286	Chrysemys_picta_bellii
ENSEEUG00000003194	DDB1	85	57.711	ENSCING00000007437	-	85	57.546	Ciona_intestinalis
ENSEEUG00000003194	DDB1	79	56.198	ENSCSAVG00000004783	-	88	53.420	Ciona_savignyi
ENSEEUG00000003194	DDB1	85	97.475	ENSCANG00000019948	DDB1	85	97.475	Colobus_angolensis_palliatus
ENSEEUG00000003194	DDB1	85	97.643	ENSCGRG00001016599	Ddb1	89	97.627	Cricetulus_griseus_chok1gshd
ENSEEUG00000003194	DDB1	85	97.643	ENSCGRG00000013427	Ddb1	85	97.643	Cricetulus_griseus_crigri
ENSEEUG00000003194	DDB1	85	86.802	ENSCSEG00000012499	ddb1	85	86.802	Cynoglossus_semilaevis
ENSEEUG00000003194	DDB1	85	87.037	ENSCVAG00000019531	ddb1	90	87.037	Cyprinodon_variegatus
ENSEEUG00000003194	DDB1	85	82.353	ENSDARG00000074431	ddb1	85	82.609	Danio_rerio
ENSEEUG00000003194	DDB1	85	97.138	ENSDNOG00000014884	DDB1	88	97.138	Dasypus_novemcinctus
ENSEEUG00000003194	DDB1	68	97.475	ENSDORG00000000127	Ddb1	82	97.475	Dipodomys_ordii
ENSEEUG00000003194	DDB1	85	61.706	FBgn0260962	pic	85	61.307	Drosophila_melanogaster
ENSEEUG00000003194	DDB1	64	76.827	ENSETEG00000001053	-	64	76.827	Echinops_telfairi
ENSEEUG00000003194	DDB1	70	77.804	ENSEBUG00000014593	ddb1	87	77.804	Eptatretus_burgeri
ENSEEUG00000003194	DDB1	85	97.306	ENSEASG00005008184	DDB1	85	97.306	Equus_asinus_asinus
ENSEEUG00000003194	DDB1	85	97.138	ENSECAG00000012136	DDB1	85	97.138	Equus_caballus
ENSEEUG00000003194	DDB1	85	87.542	ENSELUG00000023868	ddb1	85	87.542	Esox_lucius
ENSEEUG00000003194	DDB1	85	97.643	ENSFCAG00000029716	DDB1	85	97.643	Felis_catus
ENSEEUG00000003194	DDB1	85	94.949	ENSFALG00000011981	DDB1	85	94.949	Ficedula_albicollis
ENSEEUG00000003194	DDB1	85	96.801	ENSFDAG00000005128	DDB1	85	96.801	Fukomys_damarensis
ENSEEUG00000003194	DDB1	75	94.413	ENSFHEG00000022133	ddb1	81	94.413	Fundulus_heteroclitus
ENSEEUG00000003194	DDB1	75	80.135	ENSGMOG00000019386	ddb1	89	80.135	Gadus_morhua
ENSEEUG00000003194	DDB1	85	94.613	ENSGALG00000042333	DDB1	85	94.613	Gallus_gallus
ENSEEUG00000003194	DDB1	85	86.700	ENSGAFG00000013142	ddb1	90	86.700	Gambusia_affinis
ENSEEUG00000003194	DDB1	85	87.542	ENSGACG00000017182	ddb1	89	87.542	Gasterosteus_aculeatus
ENSEEUG00000003194	DDB1	79	95.455	ENSGAGG00000014124	DDB1	83	95.455	Gopherus_agassizii
ENSEEUG00000003194	DDB1	85	97.475	ENSGGOG00000004052	DDB1	85	97.475	Gorilla_gorilla
ENSEEUG00000003194	DDB1	85	87.710	ENSHBUG00000008873	ddb1	85	87.710	Haplochromis_burtoni
ENSEEUG00000003194	DDB1	85	96.633	ENSHGLG00000018430	DDB1	85	96.633	Heterocephalus_glaber_female
ENSEEUG00000003194	DDB1	85	95.118	ENSHGLG00100014475	DDB1	85	95.118	Heterocephalus_glaber_male
ENSEEUG00000003194	DDB1	85	87.205	ENSHCOG00000018670	ddb1	89	87.205	Hippocampus_comes
ENSEEUG00000003194	DDB1	85	87.037	ENSIPUG00000005612	DDB1	88	87.037	Ictalurus_punctatus
ENSEEUG00000003194	DDB1	85	97.475	ENSSTOG00000007552	DDB1	85	97.475	Ictidomys_tridecemlineatus
ENSEEUG00000003194	DDB1	85	97.306	ENSJJAG00000017769	Ddb1	85	97.306	Jaculus_jaculus
ENSEEUG00000003194	DDB1	85	87.037	ENSKMAG00000002315	ddb1	90	87.037	Kryptolebias_marmoratus
ENSEEUG00000003194	DDB1	71	87.255	ENSLBEG00000017065	ddb1	84	87.255	Labrus_bergylta
ENSEEUG00000003194	DDB1	85	90.404	ENSLACG00000017611	DDB1	85	90.404	Latimeria_chalumnae
ENSEEUG00000003194	DDB1	76	94.737	ENSLOCG00000000012	ddb1	83	94.737	Lepisosteus_oculatus
ENSEEUG00000003194	DDB1	85	97.475	ENSLAFG00000011513	DDB1	85	97.475	Loxodonta_africana
ENSEEUG00000003194	DDB1	85	97.475	ENSMFAG00000042035	DDB1	85	97.475	Macaca_fascicularis
ENSEEUG00000003194	DDB1	85	97.475	ENSMMUG00000002691	DDB1	86	97.475	Macaca_mulatta
ENSEEUG00000003194	DDB1	85	97.475	ENSMNEG00000031559	DDB1	85	97.475	Macaca_nemestrina
ENSEEUG00000003194	DDB1	85	97.475	ENSMLEG00000044136	DDB1	87	97.475	Mandrillus_leucophaeus
ENSEEUG00000003194	DDB1	85	87.710	ENSMAMG00000014372	ddb1	85	87.710	Mastacembelus_armatus
ENSEEUG00000003194	DDB1	85	87.710	ENSMZEG00005013835	ddb1	85	87.710	Maylandia_zebra
ENSEEUG00000003194	DDB1	79	94.613	ENSMGAG00000004990	DDB1	84	94.613	Meleagris_gallopavo
ENSEEUG00000003194	DDB1	85	97.643	ENSMAUG00000012926	Ddb1	85	97.643	Mesocricetus_auratus
ENSEEUG00000003194	DDB1	85	97.643	ENSMICG00000013703	DDB1	85	97.643	Microcebus_murinus
ENSEEUG00000003194	DDB1	85	97.643	ENSMOCG00000020499	Ddb1	85	97.643	Microtus_ochrogaster
ENSEEUG00000003194	DDB1	78	87.255	ENSMMOG00000001758	ddb1	90	87.255	Mola_mola
ENSEEUG00000003194	DDB1	66	99.342	ENSMODG00000020353	DDB1	65	99.342	Monodelphis_domestica
ENSEEUG00000003194	DDB1	85	87.710	ENSMALG00000014071	ddb1	85	87.710	Monopterus_albus
ENSEEUG00000003194	DDB1	85	97.475	MGP_CAROLIEiJ_G0022695	Ddb1	85	97.475	Mus_caroli
ENSEEUG00000003194	DDB1	85	97.306	ENSMUSG00000024740	Ddb1	85	97.306	Mus_musculus
ENSEEUG00000003194	DDB1	85	97.475	MGP_PahariEiJ_G0014189	Ddb1	85	97.475	Mus_pahari
ENSEEUG00000003194	DDB1	85	97.475	MGP_SPRETEiJ_G0023609	Ddb1	85	97.475	Mus_spretus
ENSEEUG00000003194	DDB1	85	93.098	ENSMPUG00000014200	DDB1	85	93.098	Mustela_putorius_furo
ENSEEUG00000003194	DDB1	85	97.138	ENSMLUG00000013232	DDB1	85	97.138	Myotis_lucifugus
ENSEEUG00000003194	DDB1	85	97.138	ENSNGAG00000009384	Ddb1	85	97.138	Nannospalax_galili
ENSEEUG00000003194	DDB1	85	87.879	ENSNBRG00000019581	ddb1	85	87.879	Neolamprologus_brichardi
ENSEEUG00000003194	DDB1	85	97.475	ENSNLEG00000002022	DDB1	84	97.475	Nomascus_leucogenys
ENSEEUG00000003194	DDB1	70	99.038	ENSMEUG00000001099	DDB1	71	99.038	Notamacropus_eugenii
ENSEEUG00000003194	DDB1	75	84.906	ENSOPRG00000008254	DDB1	75	84.906	Ochotona_princeps
ENSEEUG00000003194	DDB1	85	96.633	ENSODEG00000002419	DDB1	85	96.633	Octodon_degus
ENSEEUG00000003194	DDB1	85	87.710	ENSONIG00000005804	ddb1	85	87.710	Oreochromis_niloticus
ENSEEUG00000003194	DDB1	76	95.960	ENSOANG00000004897	DDB1	83	95.960	Ornithorhynchus_anatinus
ENSEEUG00000003194	DDB1	85	97.643	ENSOCUG00000001667	DDB1	85	97.643	Oryctolagus_cuniculus
ENSEEUG00000003194	DDB1	85	87.205	ENSORLG00000001399	ddb1	89	87.215	Oryzias_latipes
ENSEEUG00000003194	DDB1	85	87.205	ENSORLG00020001277	ddb1	86	87.205	Oryzias_latipes_hni
ENSEEUG00000003194	DDB1	85	87.205	ENSORLG00015002080	ddb1	89	87.205	Oryzias_latipes_hsok
ENSEEUG00000003194	DDB1	85	87.710	ENSOMEG00000006181	ddb1	88	87.710	Oryzias_melastigma
ENSEEUG00000003194	DDB1	85	97.306	ENSOGAG00000016103	DDB1	85	97.306	Otolemur_garnettii
ENSEEUG00000003194	DDB1	85	97.306	ENSOARG00000011716	DDB1	84	97.306	Ovis_aries
ENSEEUG00000003194	DDB1	85	97.475	ENSPPAG00000035343	DDB1	85	97.475	Pan_paniscus
ENSEEUG00000003194	DDB1	85	97.643	ENSPPRG00000013300	DDB1	85	97.643	Panthera_pardus
ENSEEUG00000003194	DDB1	79	97.643	ENSPTIG00000006909	DDB1	79	97.643	Panthera_tigris_altaica
ENSEEUG00000003194	DDB1	85	97.475	ENSPTRG00000003737	DDB1	85	97.475	Pan_troglodytes
ENSEEUG00000003194	DDB1	85	97.475	ENSPANG00000000242	DDB1	85	97.475	Papio_anubis
ENSEEUG00000003194	DDB1	85	87.037	ENSPKIG00000019213	ddb1	85	87.037	Paramormyrops_kingsleyae
ENSEEUG00000003194	DDB1	79	94.631	ENSPSIG00000013275	DDB1	80	94.631	Pelodiscus_sinensis
ENSEEUG00000003194	DDB1	78	87.059	ENSPMGG00000021179	ddb1	90	87.059	Periophthalmus_magnuspinnatus
ENSEEUG00000003194	DDB1	85	97.643	ENSPEMG00000012241	Ddb1	85	97.643	Peromyscus_maniculatus_bairdii
ENSEEUG00000003194	DDB1	76	83.099	ENSPMAG00000008479	ddb1	86	83.099	Petromyzon_marinus
ENSEEUG00000003194	DDB1	85	96.465	ENSPCIG00000002643	DDB1	85	96.465	Phascolarctos_cinereus
ENSEEUG00000003194	DDB1	85	87.037	ENSPFOG00000002768	ddb1	85	87.037	Poecilia_formosa
ENSEEUG00000003194	DDB1	85	87.037	ENSPLAG00000017227	ddb1	88	87.037	Poecilia_latipinna
ENSEEUG00000003194	DDB1	85	87.037	ENSPMEG00000011398	ddb1	88	87.037	Poecilia_mexicana
ENSEEUG00000003194	DDB1	85	87.037	ENSPREG00000004440	ddb1	88	87.037	Poecilia_reticulata
ENSEEUG00000003194	DDB1	85	91.765	ENSPPYG00000003193	DDB1	85	91.765	Pongo_abelii
ENSEEUG00000003194	DDB1	63	97.500	ENSPCAG00000011040	DDB1	63	97.500	Procavia_capensis
ENSEEUG00000003194	DDB1	85	95.805	ENSPCOG00000015176	DDB1	85	95.805	Propithecus_coquereli
ENSEEUG00000003194	DDB1	85	97.643	ENSPVAG00000003847	DDB1	85	97.643	Pteropus_vampyrus
ENSEEUG00000003194	DDB1	85	87.205	ENSPNAG00000006635	ddb1	88	87.205	Pygocentrus_nattereri
ENSEEUG00000003194	DDB1	85	97.475	ENSRNOG00000020715	Ddb1	85	97.475	Rattus_norvegicus
ENSEEUG00000003194	DDB1	85	97.475	ENSRBIG00000033611	DDB1	86	97.475	Rhinopithecus_bieti
ENSEEUG00000003194	DDB1	85	97.475	ENSRROG00000041407	DDB1	85	97.475	Rhinopithecus_roxellana
ENSEEUG00000003194	DDB1	85	97.306	ENSSBOG00000019775	DDB1	85	97.306	Saimiri_boliviensis_boliviensis
ENSEEUG00000003194	DDB1	79	96.970	ENSSHAG00000011600	DDB1	84	96.970	Sarcophilus_harrisii
ENSEEUG00000003194	DDB1	85	87.710	ENSSFOG00015011151	ddb1	87	87.710	Scleropages_formosus
ENSEEUG00000003194	DDB1	85	87.205	ENSSMAG00000009495	ddb1	85	87.205	Scophthalmus_maximus
ENSEEUG00000003194	DDB1	85	87.542	ENSSDUG00000004642	ddb1	85	87.542	Seriola_dumerili
ENSEEUG00000003194	DDB1	85	87.542	ENSSLDG00000015804	ddb1	85	87.542	Seriola_lalandi_dorsalis
ENSEEUG00000003194	DDB1	58	100.000	ENSSARG00000003290	-	61	100.000	Sorex_araneus
ENSEEUG00000003194	DDB1	85	95.118	ENSSPUG00000019338	DDB1	85	95.118	Sphenodon_punctatus
ENSEEUG00000003194	DDB1	85	87.542	ENSSPAG00000009888	ddb1	89	87.542	Stegastes_partitus
ENSEEUG00000003194	DDB1	85	96.465	ENSSSCG00000013094	DDB1	85	96.465	Sus_scrofa
ENSEEUG00000003194	DDB1	85	94.949	ENSTGUG00000006414	DDB1	85	94.949	Taeniopygia_guttata
ENSEEUG00000003194	DDB1	85	86.027	ENSTRUG00000016682	ddb1	90	85.490	Takifugu_rubripes
ENSEEUG00000003194	DDB1	73	79.530	ENSTNIG00000009565	ddb1	83	79.530	Tetraodon_nigroviridis
ENSEEUG00000003194	DDB1	73	98.312	ENSTTRG00000011055	DDB1	74	98.312	Tursiops_truncatus
ENSEEUG00000003194	DDB1	85	97.643	ENSUAMG00000017793	DDB1	84	97.643	Ursus_americanus
ENSEEUG00000003194	DDB1	85	97.643	ENSUMAG00000011788	DDB1	88	97.643	Ursus_maritimus
ENSEEUG00000003194	DDB1	70	96.154	ENSVPAG00000007963	DDB1	72	96.154	Vicugna_pacos
ENSEEUG00000003194	DDB1	85	97.475	ENSVVUG00000004987	DDB1	85	97.475	Vulpes_vulpes
ENSEEUG00000003194	DDB1	85	89.799	ENSXETG00000008820	ddb1	85	89.799	Xenopus_tropicalis
ENSEEUG00000003194	DDB1	78	86.078	ENSXCOG00000013956	ddb1	90	86.078	Xiphophorus_couchianus
ENSEEUG00000003194	DDB1	85	86.700	ENSXMAG00000000022	ddb1	90	86.700	Xiphophorus_maculatus