EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000003224 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 52986 bases
Position: chrGeneScaffold_456:3812-56797
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000002964	PUF	PF00806.19	4.8e-38	1	4
ENSEEUP00000002964	PUF	PF00806.19	4.8e-38	2	4
ENSEEUP00000002964	PUF	PF00806.19	4.8e-38	3	4
ENSEEUP00000002964	PUF	PF00806.19	4.8e-38	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003236	-	3198	-	ENSEEUP00000002964	1066 (aa)	-	UPI0000F6293E

Gene Model

Click here to download ENSEEUG00000003224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003224's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003224	-	80	91.787	ENSG00000055917	PUM2	100	100.000	Homo_sapiens
ENSEEUG00000003224	-	72	69.811	ENSAPOG00000015756	pum2	75	69.811	Acanthochromis_polyacanthus
ENSEEUG00000003224	-	80	93.750	ENSAMEG00000002823	PUM2	83	92.857	Ailuropoda_melanoleuca
ENSEEUG00000003224	-	64	80.488	ENSACIG00000010646	pum2	72	80.488	Amphilophus_citrinellus
ENSEEUG00000003224	-	63	75.000	ENSAOCG00000016619	pum2	63	75.000	Amphiprion_ocellaris
ENSEEUG00000003224	-	74	69.811	ENSAPEG00000019924	pum2	74	69.811	Amphiprion_percula
ENSEEUG00000003224	-	74	69.811	ENSATEG00000015030	pum2	68	69.811	Anabas_testudineus
ENSEEUG00000003224	-	74	92.157	ENSAPLG00000010496	PUM2	69	92.157	Anas_platyrhynchos
ENSEEUG00000003224	-	74	90.196	ENSACAG00000010491	PUM2	77	90.196	Anolis_carolinensis
ENSEEUG00000003224	-	80	92.271	ENSANAG00000021807	PUM2	77	96.226	Aotus_nancymaae
ENSEEUG00000003224	-	74	69.811	ENSACLG00000022532	pum2	73	69.811	Astatotilapia_calliptera
ENSEEUG00000003224	-	80	93.237	ENSBTAG00000011155	PUM2	91	92.377	Bos_taurus
ENSEEUG00000003224	-	80	92.271	ENSCJAG00000007450	PUM2	77	96.226	Callithrix_jacchus
ENSEEUG00000003224	-	83	93.274	ENSCAFG00000003839	PUM2	84	93.274	Canis_familiaris
ENSEEUG00000003224	-	83	93.274	ENSCAFG00020025689	PUM2	82	95.652	Canis_lupus_dingo
ENSEEUG00000003224	-	80	93.237	ENSCHIG00000022180	PUM2	83	92.377	Capra_hircus
ENSEEUG00000003224	-	80	92.823	ENSTSYG00000014463	PUM2	83	91.928	Carlito_syrichta
ENSEEUG00000003224	-	66	90.659	ENSCAPG00000016888	PUM2	72	100.000	Cavia_aperea
ENSEEUG00000003224	-	80	91.388	ENSCPOG00000031996	PUM2	77	98.113	Cavia_porcellus
ENSEEUG00000003224	-	80	92.754	ENSCCAG00000037035	PUM2	77	96.226	Cebus_capucinus
ENSEEUG00000003224	-	80	92.271	ENSCATG00000043826	PUM2	77	98.113	Cercocebus_atys
ENSEEUG00000003224	-	80	90.385	ENSCLAG00000006048	PUM2	77	98.113	Chinchilla_lanigera
ENSEEUG00000003224	-	80	92.271	ENSCSAG00000008087	PUM2	77	98.113	Chlorocebus_sabaeus
ENSEEUG00000003224	-	55	98.113	ENSCHOG00000004575	PUM2	52	98.113	Choloepus_hoffmanni
ENSEEUG00000003224	-	66	92.308	ENSCPBG00000019966	PUM2	74	92.308	Chrysemys_picta_bellii
ENSEEUG00000003224	-	80	92.271	ENSCANG00000032797	PUM2	77	98.113	Colobus_angolensis_palliatus
ENSEEUG00000003224	-	80	91.304	ENSCGRG00001025023	Pum2	83	90.583	Cricetulus_griseus_chok1gshd
ENSEEUG00000003224	-	80	91.304	ENSCGRG00000001580	Pum2	83	90.583	Cricetulus_griseus_crigri
ENSEEUG00000003224	-	76	69.811	ENSCSEG00000020899	pum2	68	69.811	Cynoglossus_semilaevis
ENSEEUG00000003224	-	74	73.585	ENSCVAG00000002426	pum2	76	73.585	Cyprinodon_variegatus
ENSEEUG00000003224	-	74	66.038	ENSDARG00000061040	pum2	68	66.038	Danio_rerio
ENSEEUG00000003224	-	80	90.821	ENSDNOG00000006733	PUM2	76	96.226	Dasypus_novemcinctus
ENSEEUG00000003224	-	74	96.226	ENSDORG00000011453	Pum2	80	96.226	Dipodomys_ordii
ENSEEUG00000003224	-	66	91.304	ENSETEG00000017683	PUM2	67	90.583	Echinops_telfairi
ENSEEUG00000003224	-	71	58.769	ENSEBUG00000004435	pum2	71	58.769	Eptatretus_burgeri
ENSEEUG00000003224	-	83	91.928	ENSEASG00005009429	PUM2	84	91.928	Equus_asinus_asinus
ENSEEUG00000003224	-	83	91.928	ENSECAG00000021930	PUM2	92	91.928	Equus_caballus
ENSEEUG00000003224	-	74	67.925	ENSELUG00000014997	pum2	69	67.925	Esox_lucius
ENSEEUG00000003224	-	80	94.686	ENSFCAG00000027520	PUM2	83	93.722	Felis_catus
ENSEEUG00000003224	-	74	92.157	ENSFALG00000001759	PUM2	77	92.157	Ficedula_albicollis
ENSEEUG00000003224	-	80	91.346	ENSFDAG00000019685	PUM2	77	98.113	Fukomys_damarensis
ENSEEUG00000003224	-	74	71.698	ENSFHEG00000021596	pum2	75	71.698	Fundulus_heteroclitus
ENSEEUG00000003224	-	74	71.698	ENSGMOG00000006903	pum2	75	71.698	Gadus_morhua
ENSEEUG00000003224	-	74	92.157	ENSGALG00000016481	PUM2	77	92.157	Gallus_gallus
ENSEEUG00000003224	-	74	71.698	ENSGAFG00000013691	pum2	74	71.698	Gambusia_affinis
ENSEEUG00000003224	-	74	69.811	ENSGACG00000009670	pum2	75	69.811	Gasterosteus_aculeatus
ENSEEUG00000003224	-	74	92.157	ENSGAGG00000020698	PUM2	77	92.157	Gopherus_agassizii
ENSEEUG00000003224	-	80	92.754	ENSGGOG00000011374	PUM2	77	98.113	Gorilla_gorilla
ENSEEUG00000003224	-	62	81.395	ENSHBUG00000016453	pum2	60	81.395	Haplochromis_burtoni
ENSEEUG00000003224	-	80	88.889	ENSHGLG00000007892	PUM2	83	88.341	Heterocephalus_glaber_female
ENSEEUG00000003224	-	80	88.889	ENSHGLG00100015510	PUM2	83	88.341	Heterocephalus_glaber_male
ENSEEUG00000003224	-	74	67.925	ENSHCOG00000010119	pum2	69	67.925	Hippocampus_comes
ENSEEUG00000003224	-	80	92.308	ENSSTOG00000006262	PUM2	77	98.113	Ictidomys_tridecemlineatus
ENSEEUG00000003224	-	80	91.346	ENSJJAG00000020969	Pum2	83	90.179	Jaculus_jaculus
ENSEEUG00000003224	-	74	69.811	ENSKMAG00000017216	pum2	71	69.811	Kryptolebias_marmoratus
ENSEEUG00000003224	-	74	69.231	ENSLBEG00000020488	pum2	68	69.231	Labrus_bergylta
ENSEEUG00000003224	-	74	88.679	ENSLACG00000008723	PUM2	67	88.679	Latimeria_chalumnae
ENSEEUG00000003224	-	74	84.906	ENSLOCG00000017196	pum2	69	84.906	Lepisosteus_oculatus
ENSEEUG00000003224	-	80	90.431	ENSLAFG00000009278	PUM2	77	98.113	Loxodonta_africana
ENSEEUG00000003224	-	80	91.787	ENSMFAG00000000492	PUM2	77	98.113	Macaca_fascicularis
ENSEEUG00000003224	-	80	91.787	ENSMMUG00000023181	PUM2	77	98.113	Macaca_mulatta
ENSEEUG00000003224	-	80	91.787	ENSMNEG00000039659	PUM2	77	98.113	Macaca_nemestrina
ENSEEUG00000003224	-	80	92.271	ENSMLEG00000039243	PUM2	77	98.113	Mandrillus_leucophaeus
ENSEEUG00000003224	-	74	69.811	ENSMAMG00000006121	pum2	68	69.811	Mastacembelus_armatus
ENSEEUG00000003224	-	74	69.811	ENSMZEG00005000791	pum2	73	69.811	Maylandia_zebra
ENSEEUG00000003224	-	74	92.157	ENSMGAG00000014040	PUM2	77	92.157	Meleagris_gallopavo
ENSEEUG00000003224	-	80	91.304	ENSMAUG00000000311	Pum2	83	90.583	Mesocricetus_auratus
ENSEEUG00000003224	-	83	91.928	ENSMICG00000011647	PUM2	84	91.928	Microcebus_murinus
ENSEEUG00000003224	-	80	91.787	ENSMOCG00000013663	Pum2	83	91.031	Microtus_ochrogaster
ENSEEUG00000003224	-	74	62.963	ENSMMOG00000002975	pum2	75	63.850	Mola_mola
ENSEEUG00000003224	-	74	96.078	ENSMODG00000009811	PUM2	77	96.078	Monodelphis_domestica
ENSEEUG00000003224	-	72	71.698	ENSMALG00000022313	pum2	77	71.698	Monopterus_albus
ENSEEUG00000003224	-	80	90.865	MGP_CAROLIEiJ_G0017603	Pum2	83	90.625	Mus_caroli
ENSEEUG00000003224	-	80	90.865	ENSMUSG00000020594	Pum2	83	90.179	Mus_musculus
ENSEEUG00000003224	-	80	91.346	MGP_PahariEiJ_G0029361	Pum2	83	90.179	Mus_pahari
ENSEEUG00000003224	-	80	90.865	MGP_SPRETEiJ_G0018447	Pum2	83	90.179	Mus_spretus
ENSEEUG00000003224	-	80	94.686	ENSMPUG00000013734	PUM2	83	93.722	Mustela_putorius_furo
ENSEEUG00000003224	-	80	92.823	ENSMLUG00000007362	PUM2	77	98.113	Myotis_lucifugus
ENSEEUG00000003224	-	81	89.372	ENSNGAG00000016665	-	84	89.238	Nannospalax_galili
ENSEEUG00000003224	-	67	96.154	ENSNGAG00000016239	-	73	96.154	Nannospalax_galili
ENSEEUG00000003224	-	67	69.811	ENSNBRG00000020737	pum2	65	69.811	Neolamprologus_brichardi
ENSEEUG00000003224	-	80	92.271	ENSNLEG00000002509	PUM2	77	98.113	Nomascus_leucogenys
ENSEEUG00000003224	-	74	96.078	ENSMEUG00000016567	PUM2	76	96.078	Notamacropus_eugenii
ENSEEUG00000003224	-	80	87.981	ENSODEG00000007823	PUM2	83	87.054	Octodon_degus
ENSEEUG00000003224	-	74	69.811	ENSONIG00000006119	pum2	68	69.811	Oreochromis_niloticus
ENSEEUG00000003224	-	80	92.308	ENSOCUG00000017908	PUM2	77	98.113	Oryctolagus_cuniculus
ENSEEUG00000003224	-	74	71.698	ENSORLG00000012611	pum2	75	71.698	Oryzias_latipes
ENSEEUG00000003224	-	74	69.811	ENSORLG00020014452	pum2	75	69.811	Oryzias_latipes_hni
ENSEEUG00000003224	-	74	71.698	ENSORLG00015009427	pum2	69	71.698	Oryzias_latipes_hsok
ENSEEUG00000003224	-	66	60.185	ENSOMEG00000005889	pum2	73	61.268	Oryzias_melastigma
ENSEEUG00000003224	-	65	88.742	ENSOGAG00000002187	PUM2	68	96.226	Otolemur_garnettii
ENSEEUG00000003224	-	80	93.237	ENSOARG00000017236	PUM2	83	92.377	Ovis_aries
ENSEEUG00000003224	-	80	92.754	ENSPPAG00000023095	PUM2	77	98.113	Pan_paniscus
ENSEEUG00000003224	-	80	94.686	ENSPPRG00000021443	PUM2	83	93.722	Panthera_pardus
ENSEEUG00000003224	-	80	94.686	ENSPTIG00000018982	PUM2	83	93.722	Panthera_tigris_altaica
ENSEEUG00000003224	-	80	92.754	ENSPTRG00000011692	PUM2	77	98.113	Pan_troglodytes
ENSEEUG00000003224	-	78	92.271	ENSPANG00000009393	PUM2	81	100.000	Papio_anubis
ENSEEUG00000003224	-	71	78.846	ENSPKIG00000023195	pum2	73	78.846	Paramormyrops_kingsleyae
ENSEEUG00000003224	-	74	92.157	ENSPSIG00000011626	PUM2	68	92.157	Pelodiscus_sinensis
ENSEEUG00000003224	-	71	69.811	ENSPMGG00000016123	pum2	73	69.811	Periophthalmus_magnuspinnatus
ENSEEUG00000003224	-	80	89.372	ENSPEMG00000008357	Pum2	83	89.238	Peromyscus_maniculatus_bairdii
ENSEEUG00000003224	-	74	74.074	ENSPMAG00000007038	pum2	74	74.074	Petromyzon_marinus
ENSEEUG00000003224	-	74	94.118	ENSPCIG00000022139	PUM2	77	94.118	Phascolarctos_cinereus
ENSEEUG00000003224	-	74	73.585	ENSPFOG00000019208	pum2	68	73.585	Poecilia_formosa
ENSEEUG00000003224	-	74	73.585	ENSPLAG00000001826	pum2	74	73.585	Poecilia_latipinna
ENSEEUG00000003224	-	74	73.585	ENSPMEG00000015766	pum2	68	73.585	Poecilia_mexicana
ENSEEUG00000003224	-	67	73.585	ENSPREG00000006905	pum2	74	73.585	Poecilia_reticulata
ENSEEUG00000003224	-	80	93.237	ENSPPYG00000012617	PUM2	77	98.113	Pongo_abelii
ENSEEUG00000003224	-	81	91.928	ENSPCOG00000019636	PUM2	84	91.928	Propithecus_coquereli
ENSEEUG00000003224	-	78	93.237	ENSPVAG00000002920	PUM2	83	92.377	Pteropus_vampyrus
ENSEEUG00000003224	-	74	69.811	ENSPNYG00000022901	pum2	68	69.811	Pundamilia_nyererei
ENSEEUG00000003224	-	63	75.463	ENSPNAG00000008025	pum2	61	75.463	Pygocentrus_nattereri
ENSEEUG00000003224	-	80	91.827	ENSRNOG00000006180	Pum2	82	91.429	Rattus_norvegicus
ENSEEUG00000003224	-	80	92.271	ENSRBIG00000044880	PUM2	77	98.113	Rhinopithecus_bieti
ENSEEUG00000003224	-	80	92.754	ENSSBOG00000022007	PUM2	77	96.226	Saimiri_boliviensis_boliviensis
ENSEEUG00000003224	-	74	96.078	ENSSHAG00000002778	PUM2	76	96.078	Sarcophilus_harrisii
ENSEEUG00000003224	-	68	70.792	ENSSFOG00015003476	pum2	70	69.668	Scleropages_formosus
ENSEEUG00000003224	-	62	95.556	ENSSMAG00000018236	pum2	67	95.556	Scophthalmus_maximus
ENSEEUG00000003224	-	69	63.134	ENSSDUG00000001800	pum2	69	63.889	Seriola_dumerili
ENSEEUG00000003224	-	74	69.811	ENSSLDG00000000981	pum2	68	69.811	Seriola_lalandi_dorsalis
ENSEEUG00000003224	-	58	92.344	ENSSARG00000010992	PUM2	56	98.113	Sorex_araneus
ENSEEUG00000003224	-	73	90.909	ENSSPUG00000017012	PUM2	76	90.909	Sphenodon_punctatus
ENSEEUG00000003224	-	74	69.811	ENSSPAG00000022948	pum2	74	69.811	Stegastes_partitus
ENSEEUG00000003224	-	80	91.388	ENSSSCG00000008600	PUM2	91	91.031	Sus_scrofa
ENSEEUG00000003224	-	74	92.157	ENSTGUG00000013149	PUM2	77	92.157	Taeniopygia_guttata
ENSEEUG00000003224	-	75	71.698	ENSTRUG00000018167	pum2	68	71.698	Takifugu_rubripes
ENSEEUG00000003224	-	74	69.811	ENSTNIG00000003116	pum2	68	69.811	Tetraodon_nigroviridis
ENSEEUG00000003224	-	60	97.778	ENSTBEG00000008729	PUM2	62	97.778	Tupaia_belangeri
ENSEEUG00000003224	-	74	100.000	ENSTTRG00000004887	PUM2	79	100.000	Tursiops_truncatus
ENSEEUG00000003224	-	53	100.000	ENSUAMG00000008120	PUM2	71	100.000	Ursus_americanus
ENSEEUG00000003224	-	80	94.686	ENSUMAG00000023198	PUM2	81	96.377	Ursus_maritimus
ENSEEUG00000003224	-	80	93.237	ENSVPAG00000005056	PUM2	83	92.377	Vicugna_pacos
ENSEEUG00000003224	-	83	93.722	ENSVVUG00000014829	PUM2	82	96.377	Vulpes_vulpes
ENSEEUG00000003224	-	74	79.630	ENSXETG00000008903	pum2	69	79.630	Xenopus_tropicalis
ENSEEUG00000003224	-	69	62.136	ENSXCOG00000002556	pum2	69	65.094	Xiphophorus_couchianus
ENSEEUG00000003224	-	74	73.585	ENSXMAG00000017682	pum2	74	73.585	Xiphophorus_maculatus