EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000003323 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 7098 bases
Position: chrscaffold_205658:51-7148
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000003042	TruB_N	PF01509.18	6.3e-22	1	1
ENSEEUP00000003042	PUA	PF01472.20	2.4e-18	1	1
ENSEEUP00000003042	DKCLD	PF08068.12	1.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003324	DKC1-201	1272	-	ENSEEUP00000003042	424 (aa)	-	UPI0000F610BF

Gene Model

Click here to download ENSEEUG00000003323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003323	DKC1	99	90.353	ENSG00000130826	DKC1	99	95.610	Homo_sapiens
ENSEEUG00000003323	DKC1	99	81.840	ENSAPOG00000007799	dkc1	81	81.690	Acanthochromis_polyacanthus
ENSEEUG00000003323	DKC1	100	90.610	ENSAMEG00000002776	DKC1	84	90.610	Ailuropoda_melanoleuca
ENSEEUG00000003323	DKC1	91	87.113	ENSACIG00000022614	dkc1	87	82.297	Amphilophus_citrinellus
ENSEEUG00000003323	DKC1	99	81.604	ENSAOCG00000013159	dkc1	79	86.340	Amphiprion_ocellaris
ENSEEUG00000003323	DKC1	99	81.604	ENSAPEG00000002284	dkc1	84	81.455	Amphiprion_percula
ENSEEUG00000003323	DKC1	96	81.100	ENSATEG00000013682	dkc1	79	83.457	Anabas_testudineus
ENSEEUG00000003323	DKC1	99	84.235	ENSACAG00000015600	DKC1	73	84.235	Anolis_carolinensis
ENSEEUG00000003323	DKC1	99	90.824	ENSANAG00000022732	DKC1	83	90.824	Aotus_nancymaae
ENSEEUG00000003323	DKC1	91	87.113	ENSACLG00000015605	dkc1	79	87.113	Astatotilapia_calliptera
ENSEEUG00000003323	DKC1	98	82.974	ENSAMXG00000017108	dkc1	77	86.410	Astyanax_mexicanus
ENSEEUG00000003323	DKC1	100	90.376	ENSBTAG00000013045	DKC1	84	90.376	Bos_taurus
ENSEEUG00000003323	DKC1	89	68.170	WBGene00010478	K01G5.5	92	65.037	Caenorhabditis_elegans
ENSEEUG00000003323	DKC1	99	89.882	ENSCJAG00000004210	DKC1	83	89.882	Callithrix_jacchus
ENSEEUG00000003323	DKC1	100	79.070	ENSCAFG00000009311	-	85	78.837	Canis_familiaris
ENSEEUG00000003323	DKC1	100	88.761	ENSCAFG00000019620	-	84	88.991	Canis_familiaris
ENSEEUG00000003323	DKC1	100	79.108	ENSCAFG00020009379	-	81	79.108	Canis_lupus_dingo
ENSEEUG00000003323	DKC1	100	88.761	ENSCAFG00020008918	-	84	88.991	Canis_lupus_dingo
ENSEEUG00000003323	DKC1	100	90.141	ENSCHIG00000017392	DKC1	84	90.141	Capra_hircus
ENSEEUG00000003323	DKC1	99	88.736	ENSTSYG00000007681	DKC1	83	88.736	Carlito_syrichta
ENSEEUG00000003323	DKC1	95	90.323	ENSCAPG00000003342	DKC1	91	91.206	Cavia_aperea
ENSEEUG00000003323	DKC1	99	90.588	ENSCPOG00000008825	DKC1	83	90.588	Cavia_porcellus
ENSEEUG00000003323	DKC1	99	79.765	ENSCCAG00000027418	DKC1	81	79.765	Cebus_capucinus
ENSEEUG00000003323	DKC1	99	89.647	ENSCATG00000033602	DKC1	83	89.647	Cercocebus_atys
ENSEEUG00000003323	DKC1	99	90.802	ENSCLAG00000000720	DKC1	83	90.330	Chinchilla_lanigera
ENSEEUG00000003323	DKC1	99	89.647	ENSCSAG00000006706	DKC1	83	89.647	Chlorocebus_sabaeus
ENSEEUG00000003323	DKC1	93	90.152	ENSCPBG00000005858	DKC1	85	90.176	Chrysemys_picta_bellii
ENSEEUG00000003323	DKC1	98	74.048	ENSCING00000004599	-	75	78.351	Ciona_intestinalis
ENSEEUG00000003323	DKC1	91	78.608	ENSCSAVG00000010047	-	94	74.171	Ciona_savignyi
ENSEEUG00000003323	DKC1	99	89.647	ENSCANG00000027987	DKC1	83	89.647	Colobus_angolensis_palliatus
ENSEEUG00000003323	DKC1	99	89.882	ENSCGRG00001014574	-	83	89.882	Cricetulus_griseus_chok1gshd
ENSEEUG00000003323	DKC1	85	72.452	ENSCGRG00001016789	-	78	72.452	Cricetulus_griseus_chok1gshd
ENSEEUG00000003323	DKC1	86	72.253	ENSCGRG00000014809	-	76	72.452	Cricetulus_griseus_crigri
ENSEEUG00000003323	DKC1	99	89.882	ENSCGRG00000016075	-	83	89.882	Cricetulus_griseus_crigri
ENSEEUG00000003323	DKC1	99	81.560	ENSCSEG00000012633	dkc1	90	81.797	Cynoglossus_semilaevis
ENSEEUG00000003323	DKC1	92	86.375	ENSCVAG00000010155	dkc1	77	86.189	Cyprinodon_variegatus
ENSEEUG00000003323	DKC1	99	83.055	ENSDARG00000016484	dkc1	80	82.578	Danio_rerio
ENSEEUG00000003323	DKC1	99	90.118	ENSDNOG00000004218	DKC1	83	90.118	Dasypus_novemcinctus
ENSEEUG00000003323	DKC1	63	79.705	ENSDORG00000013566	-	89	79.705	Dipodomys_ordii
ENSEEUG00000003323	DKC1	97	69.660	FBgn0259937	Nop60B	88	65.471	Drosophila_melanogaster
ENSEEUG00000003323	DKC1	99	84.235	ENSETEG00000016095	DKC1	79	91.026	Echinops_telfairi
ENSEEUG00000003323	DKC1	74	78.549	ENSEBUG00000015962	dkc1	99	80.887	Eptatretus_burgeri
ENSEEUG00000003323	DKC1	100	88.991	ENSEASG00005007484	DKC1	84	88.761	Equus_asinus_asinus
ENSEEUG00000003323	DKC1	100	88.991	ENSECAG00000023524	DKC1	84	88.761	Equus_caballus
ENSEEUG00000003323	DKC1	97	82.367	ENSELUG00000014538	dkc1	85	81.280	Esox_lucius
ENSEEUG00000003323	DKC1	100	90.141	ENSFCAG00000006577	DKC1	84	90.141	Felis_catus
ENSEEUG00000003323	DKC1	100	84.028	ENSFALG00000011496	DKC1	82	83.565	Ficedula_albicollis
ENSEEUG00000003323	DKC1	99	89.176	ENSFDAG00000002516	DKC1	79	93.590	Fukomys_damarensis
ENSEEUG00000003323	DKC1	98	82.692	ENSFHEG00000004627	dkc1	78	86.889	Fundulus_heteroclitus
ENSEEUG00000003323	DKC1	91	82.990	ENSGMOG00000017277	dkc1	99	82.990	Gadus_morhua
ENSEEUG00000003323	DKC1	100	84.742	ENSGALG00000005054	DKC1	82	84.272	Gallus_gallus
ENSEEUG00000003323	DKC1	99	81.604	ENSGAFG00000011486	dkc1	67	86.189	Gambusia_affinis
ENSEEUG00000003323	DKC1	91	87.113	ENSGACG00000004373	dkc1	96	89.362	Gasterosteus_aculeatus
ENSEEUG00000003323	DKC1	100	85.915	ENSGAGG00000011330	DKC1	81	85.915	Gopherus_agassizii
ENSEEUG00000003323	DKC1	99	90.353	ENSGGOG00000001045	DKC1	83	90.353	Gorilla_gorilla
ENSEEUG00000003323	DKC1	99	82.339	ENSHBUG00000012436	dkc1	78	86.701	Haplochromis_burtoni
ENSEEUG00000003323	DKC1	99	90.476	ENSHGLG00000000649	DKC1	82	89.647	Heterocephalus_glaber_female
ENSEEUG00000003323	DKC1	99	90.476	ENSHGLG00100001153	DKC1	83	89.647	Heterocephalus_glaber_male
ENSEEUG00000003323	DKC1	97	81.132	ENSHCOG00000021099	dkc1	86	80.742	Hippocampus_comes
ENSEEUG00000003323	DKC1	99	82.185	ENSIPUG00000010309	dkc1	76	85.496	Ictalurus_punctatus
ENSEEUG00000003323	DKC1	99	89.437	ENSSTOG00000001074	-	87	89.437	Ictidomys_tridecemlineatus
ENSEEUG00000003323	DKC1	99	80.235	ENSSTOG00000020149	-	82	80.235	Ictidomys_tridecemlineatus
ENSEEUG00000003323	DKC1	99	77.518	ENSSTOG00000011904	-	79	77.518	Ictidomys_tridecemlineatus
ENSEEUG00000003323	DKC1	63	79.705	ENSJJAG00000010086	-	89	79.705	Jaculus_jaculus
ENSEEUG00000003323	DKC1	93	83.797	ENSKMAG00000008010	dkc1	79	83.797	Kryptolebias_marmoratus
ENSEEUG00000003323	DKC1	99	82.100	ENSLBEG00000019122	dkc1	84	82.100	Labrus_bergylta
ENSEEUG00000003323	DKC1	99	83.688	ENSLACG00000014025	DKC1	89	88.205	Latimeria_chalumnae
ENSEEUG00000003323	DKC1	99	83.019	ENSLOCG00000013713	dkc1	86	82.783	Lepisosteus_oculatus
ENSEEUG00000003323	DKC1	99	90.588	ENSLAFG00000000221	DKC1	83	90.588	Loxodonta_africana
ENSEEUG00000003323	DKC1	99	89.882	ENSMFAG00000032398	DKC1	71	89.882	Macaca_fascicularis
ENSEEUG00000003323	DKC1	99	89.647	ENSMMUG00000005768	DKC1	83	89.647	Macaca_mulatta
ENSEEUG00000003323	DKC1	99	89.647	ENSMNEG00000034503	DKC1	83	89.647	Macaca_nemestrina
ENSEEUG00000003323	DKC1	99	89.647	ENSMLEG00000034422	DKC1	83	89.647	Mandrillus_leucophaeus
ENSEEUG00000003323	DKC1	91	87.629	ENSMAMG00000005427	dkc1	87	87.629	Mastacembelus_armatus
ENSEEUG00000003323	DKC1	99	82.578	ENSMZEG00005014503	dkc1	78	86.957	Maylandia_zebra
ENSEEUG00000003323	DKC1	94	85.427	ENSMGAG00000009238	DKC1	85	85.427	Meleagris_gallopavo
ENSEEUG00000003323	DKC1	63	79.705	ENSMAUG00000016454	-	89	79.705	Mesocricetus_auratus
ENSEEUG00000003323	DKC1	99	88.679	ENSMICG00000038751	-	85	88.679	Microcebus_murinus
ENSEEUG00000003323	DKC1	94	80.702	ENSMICG00000002818	-	99	81.868	Microcebus_murinus
ENSEEUG00000003323	DKC1	63	77.122	ENSMOCG00000001169	-	89	77.122	Microtus_ochrogaster
ENSEEUG00000003323	DKC1	94	84.788	ENSMMOG00000020348	dkc1	84	86.856	Mola_mola
ENSEEUG00000003323	DKC1	93	88.917	ENSMODG00000009243	DKC1	69	88.917	Monodelphis_domestica
ENSEEUG00000003323	DKC1	99	81.840	ENSMALG00000009454	dkc1	85	80.465	Monopterus_albus
ENSEEUG00000003323	DKC1	99	78.037	MGP_CAROLIEiJ_G0033191	Dkc1	78	90.435	Mus_caroli
ENSEEUG00000003323	DKC1	99	90.353	ENSMUSG00000031403	Dkc1	83	90.353	Mus_musculus
ENSEEUG00000003323	DKC1	99	89.882	MGP_PahariEiJ_G0031735	Dkc1	83	89.882	Mus_pahari
ENSEEUG00000003323	DKC1	99	90.353	MGP_SPRETEiJ_G0034351	Dkc1	83	90.353	Mus_spretus
ENSEEUG00000003323	DKC1	100	88.073	ENSMPUG00000016136	DKC1	81	88.073	Mustela_putorius_furo
ENSEEUG00000003323	DKC1	100	84.615	ENSMLUG00000011918	DKC1	82	84.615	Myotis_lucifugus
ENSEEUG00000003323	DKC1	63	79.554	ENSNGAG00000015724	-	88	79.554	Nannospalax_galili
ENSEEUG00000003323	DKC1	91	87.629	ENSNBRG00000005638	dkc1	78	87.629	Neolamprologus_brichardi
ENSEEUG00000003323	DKC1	99	90.588	ENSNLEG00000014323	DKC1	83	90.588	Nomascus_leucogenys
ENSEEUG00000003323	DKC1	94	85.250	ENSMEUG00000001066	DKC1	93	81.840	Notamacropus_eugenii
ENSEEUG00000003323	DKC1	80	86.842	ENSOPRG00000005248	DKC1	68	86.842	Ochotona_princeps
ENSEEUG00000003323	DKC1	96	92.875	ENSODEG00000011816	-	83	90.588	Octodon_degus
ENSEEUG00000003323	DKC1	63	80.074	ENSODEG00000000549	-	89	80.074	Octodon_degus
ENSEEUG00000003323	DKC1	98	83.855	ENSONIG00000013889	dkc1	78	87.724	Oreochromis_niloticus
ENSEEUG00000003323	DKC1	53	77.632	ENSOANG00000022295	-	64	77.632	Ornithorhynchus_anatinus
ENSEEUG00000003323	DKC1	99	86.936	ENSOANG00000008713	-	87	86.019	Ornithorhynchus_anatinus
ENSEEUG00000003323	DKC1	99	90.588	ENSOCUG00000012646	DKC1	83	90.588	Oryctolagus_cuniculus
ENSEEUG00000003323	DKC1	91	86.788	ENSORLG00000018748	dkc1	76	86.788	Oryzias_latipes
ENSEEUG00000003323	DKC1	99	82.464	ENSOMEG00000005786	dkc1	79	86.026	Oryzias_melastigma
ENSEEUG00000003323	DKC1	99	87.816	ENSOGAG00000003399	DKC1	83	87.816	Otolemur_garnettii
ENSEEUG00000003323	DKC1	100	90.141	ENSOARG00000003047	DKC1	84	90.141	Ovis_aries
ENSEEUG00000003323	DKC1	99	91.190	ENSPPAG00000023820	DKC1	83	90.353	Pan_paniscus
ENSEEUG00000003323	DKC1	100	90.141	ENSPPRG00000009104	DKC1	84	90.141	Panthera_pardus
ENSEEUG00000003323	DKC1	100	88.498	ENSPTIG00000017469	DKC1	79	94.388	Panthera_tigris_altaica
ENSEEUG00000003323	DKC1	99	90.353	ENSPTRG00000022449	DKC1	83	90.353	Pan_troglodytes
ENSEEUG00000003323	DKC1	99	90.353	ENSPTRG00000043416	-	72	90.353	Pan_troglodytes
ENSEEUG00000003323	DKC1	99	89.647	ENSPANG00000011978	DKC1	83	89.647	Papio_anubis
ENSEEUG00000003323	DKC1	99	82.938	ENSPKIG00000008443	dkc1	82	88.083	Paramormyrops_kingsleyae
ENSEEUG00000003323	DKC1	84	92.157	ENSPSIG00000013765	DKC1	86	92.157	Pelodiscus_sinensis
ENSEEUG00000003323	DKC1	91	82.474	ENSPMGG00000004097	dkc1	71	82.474	Periophthalmus_magnuspinnatus
ENSEEUG00000003323	DKC1	99	51.896	ENSPEMG00000013348	Dkc1	80	51.282	Peromyscus_maniculatus_bairdii
ENSEEUG00000003323	DKC1	99	86.667	ENSPCIG00000016706	DKC1	71	85.681	Phascolarctos_cinereus
ENSEEUG00000003323	DKC1	99	81.840	ENSPFOG00000018653	dkc1	78	86.445	Poecilia_formosa
ENSEEUG00000003323	DKC1	99	81.840	ENSPLAG00000003272	dkc1	71	86.445	Poecilia_latipinna
ENSEEUG00000003323	DKC1	99	81.840	ENSPMEG00000010413	dkc1	78	86.445	Poecilia_mexicana
ENSEEUG00000003323	DKC1	99	81.604	ENSPREG00000004100	dkc1	76	86.340	Poecilia_reticulata
ENSEEUG00000003323	DKC1	99	90.353	ENSPPYG00000020892	DKC1	83	90.353	Pongo_abelii
ENSEEUG00000003323	DKC1	88	91.979	ENSPCAG00000015034	DKC1	72	92.954	Procavia_capensis
ENSEEUG00000003323	DKC1	99	89.412	ENSPCOG00000026874	DKC1	83	89.412	Propithecus_coquereli
ENSEEUG00000003323	DKC1	100	88.732	ENSPVAG00000009222	DKC1	83	88.498	Pteropus_vampyrus
ENSEEUG00000003323	DKC1	99	81.862	ENSPNYG00000020063	dkc1	77	87.113	Pundamilia_nyererei
ENSEEUG00000003323	DKC1	98	83.693	ENSPNAG00000005780	dkc1	77	86.788	Pygocentrus_nattereri
ENSEEUG00000003323	DKC1	99	85.412	ENSRNOG00000055562	Dkc1	83	85.412	Rattus_norvegicus
ENSEEUG00000003323	DKC1	99	89.647	ENSRBIG00000028457	DKC1	71	89.647	Rhinopithecus_bieti
ENSEEUG00000003323	DKC1	99	89.647	ENSRROG00000044780	DKC1	83	89.647	Rhinopithecus_roxellana
ENSEEUG00000003323	DKC1	94	67.168	YLR175W	-	85	66.262	Saccharomyces_cerevisiae
ENSEEUG00000003323	DKC1	99	90.118	ENSSBOG00000033746	DKC1	83	90.118	Saimiri_boliviensis_boliviensis
ENSEEUG00000003323	DKC1	100	86.150	ENSSHAG00000002463	DKC1	89	85.681	Sarcophilus_harrisii
ENSEEUG00000003323	DKC1	99	83.333	ENSSFOG00015009585	dkc1	82	83.099	Scleropages_formosus
ENSEEUG00000003323	DKC1	99	83.019	ENSSMAG00000002552	dkc1	85	81.324	Scophthalmus_maximus
ENSEEUG00000003323	DKC1	99	82.270	ENSSDUG00000009963	dkc1	82	82.270	Seriola_dumerili
ENSEEUG00000003323	DKC1	95	84.158	ENSSLDG00000019342	dkc1	87	81.818	Seriola_lalandi_dorsalis
ENSEEUG00000003323	DKC1	99	84.000	ENSSARG00000001822	DKC1	85	84.000	Sorex_araneus
ENSEEUG00000003323	DKC1	99	85.012	ENSSPUG00000018907	DKC1	75	89.169	Sphenodon_punctatus
ENSEEUG00000003323	DKC1	91	86.598	ENSSPAG00000002585	dkc1	74	86.598	Stegastes_partitus
ENSEEUG00000003323	DKC1	100	88.303	ENSSSCG00000012823	DKC1	87	90.408	Sus_scrofa
ENSEEUG00000003323	DKC1	94	85.930	ENSTGUG00000006781	DKC1	88	85.427	Taeniopygia_guttata
ENSEEUG00000003323	DKC1	95	85.075	ENSTRUG00000004413	dkc1	83	81.840	Takifugu_rubripes
ENSEEUG00000003323	DKC1	99	65.967	ENSTNIG00000002582	dkc1	83	65.967	Tetraodon_nigroviridis
ENSEEUG00000003323	DKC1	71	90.301	ENSTBEG00000011262	DKC1	84	89.145	Tupaia_belangeri
ENSEEUG00000003323	DKC1	65	94.928	ENSTTRG00000008089	DKC1	55	94.928	Tursiops_truncatus
ENSEEUG00000003323	DKC1	98	90.887	ENSUAMG00000022721	DKC1	88	90.887	Ursus_americanus
ENSEEUG00000003323	DKC1	98	90.647	ENSUMAG00000016899	DKC1	92	94.695	Ursus_maritimus
ENSEEUG00000003323	DKC1	100	87.585	ENSVVUG00000020734	-	76	87.585	Vulpes_vulpes
ENSEEUG00000003323	DKC1	99	75.294	ENSVVUG00000021671	-	73	77.834	Vulpes_vulpes
ENSEEUG00000003323	DKC1	98	83.693	ENSXETG00000032517	DKC1	79	86.466	Xenopus_tropicalis
ENSEEUG00000003323	DKC1	91	86.856	ENSXCOG00000005498	dkc1	83	86.856	Xiphophorus_couchianus
ENSEEUG00000003323	DKC1	99	82.075	ENSXMAG00000004919	dkc1	79	86.701	Xiphophorus_maculatus