EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000003430 (Gene tree)
Gene ID: -
Gene Symbol: SREK1
Alias: DKFZp564B176|SFRS12|SRrp508|SRrp86
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 52791 bases
Position: chrGeneScaffold_5379:4451-57241
Accession: 17882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000003144	RRM_1	PF00076.22	3.3e-22	1	2
ENSEEUP00000003144	RRM_1	PF00076.22	3.3e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003445	SREK1-201	1830	-	ENSEEUP00000003144	609 (aa)	-	UPI0000F62852

Gene Model

Click here to download ENSEEUG00000003430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003430	SREK1	73	92.913	ENSCGRG00001015222	-	63	93.277	Cricetulus_griseus_chok1gshd
ENSEEUG00000003430	SREK1	73	92.913	ENSCGRG00000002130	-	63	93.277	Cricetulus_griseus_crigri
ENSEEUG00000003430	SREK1	50	97.037	ENSFCAG00000040658	-	70	97.037	Felis_catus
ENSEEUG00000003430	SREK1	77	91.235	ENSFALG00000009835	SREK1	68	93.191	Ficedula_albicollis
ENSEEUG00000003430	SREK1	70	97.610	ENSOCUG00000001319	SREK1	61	97.610	Oryctolagus_cuniculus
ENSEEUG00000003430	SREK1	69	96.414	ENSPPRG00000024617	SREK1	83	97.590	Panthera_pardus
ENSEEUG00000003430	SREK1	69	96.414	ENSPTIG00000006608	SREK1	83	97.590	Panthera_tigris_altaica
ENSEEUG00000003430	SREK1	73	92.913	ENSPEMG00000024051	-	60	93.277	Peromyscus_maniculatus_bairdii