EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000003649 (Gene tree)
Gene ID: -
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 21455 bases
Position: chrGeneScaffold_1449:126-21580
Accession: 103122437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000003312	zf-C2H2	PF00096.26	6.1e-28	1	6
ENSEEUP00000003312	zf-C2H2	PF00096.26	6.1e-28	2	6
ENSEEUP00000003312	zf-C2H2	PF00096.26	6.1e-28	3	6
ENSEEUP00000003312	zf-C2H2	PF00096.26	6.1e-28	4	6
ENSEEUP00000003312	zf-C2H2	PF00096.26	6.1e-28	5	6
ENSEEUP00000003312	zf-C2H2	PF00096.26	6.1e-28	6	6
ENSEEUP00000003312	zf-met	PF12874.7	4.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003635	SALL4-201	3108	XM_007533049	ENSEEUP00000003312	1036 (aa)	XP_007533111	UPI0000F61BAB

Gene Model

Click here to download ENSEEUG00000003649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000003649	SALL4	52	45.283	ENSEEUG00000006864	ZNF235	58	43.636
ENSEEUG00000003649	SALL4	52	37.931	ENSEEUG00000008150	-	93	37.931
ENSEEUG00000003649	SALL4	94	64.706	ENSEEUG00000002014	SALL1	99	64.706
ENSEEUG00000003649	SALL4	52	50.000	ENSEEUG00000008362	-	77	50.000
ENSEEUG00000003649	SALL4	54	51.852	ENSEEUG00000012650	ZNF81	58	46.552
ENSEEUG00000003649	SALL4	53	54.717	ENSEEUG00000009480	-	55	54.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003649	SALL4	99	81.611	ENSG00000101115	SALL4	99	95.455	Homo_sapiens
ENSEEUG00000003649	SALL4	99	42.794	ENSAPOG00000002465	sall4	100	44.074	Acanthochromis_polyacanthus
ENSEEUG00000003649	SALL4	99	81.853	ENSAMEG00000013250	-	100	81.474	Ailuropoda_melanoleuca
ENSEEUG00000003649	SALL4	99	41.899	ENSACIG00000017298	sall4	100	43.118	Amphilophus_citrinellus
ENSEEUG00000003649	SALL4	99	43.184	ENSAOCG00000023678	sall4	100	44.367	Amphiprion_ocellaris
ENSEEUG00000003649	SALL4	99	42.832	ENSAPEG00000000751	sall4	100	44.192	Amphiprion_percula
ENSEEUG00000003649	SALL4	99	43.144	ENSATEG00000024480	sall4	100	42.882	Anabas_testudineus
ENSEEUG00000003649	SALL4	99	54.434	ENSAPLG00000006498	SALL4	100	54.163	Anas_platyrhynchos
ENSEEUG00000003649	SALL4	99	54.601	ENSACAG00000012748	SALL4	100	55.022	Anolis_carolinensis
ENSEEUG00000003649	SALL4	99	81.723	ENSANAG00000023352	SALL4	92	95.455	Aotus_nancymaae
ENSEEUG00000003649	SALL4	99	42.476	ENSACLG00000017851	sall4	100	43.820	Astatotilapia_calliptera
ENSEEUG00000003649	SALL4	99	43.723	ENSAMXG00000001254	sall4	99	45.670	Astyanax_mexicanus
ENSEEUG00000003649	SALL4	99	75.353	ENSBTAG00000003101	SALL4	100	75.165	Bos_taurus
ENSEEUG00000003649	SALL4	81	83.471	ENSCJAG00000000591	SALL4	99	83.471	Callithrix_jacchus
ENSEEUG00000003649	SALL4	99	82.781	ENSCAFG00000011738	-	100	81.552	Canis_familiaris
ENSEEUG00000003649	SALL4	99	82.687	ENSCAFG00020021870	SALL4	100	81.457	Canis_lupus_dingo
ENSEEUG00000003649	SALL4	99	74.554	ENSCHIG00000026270	SALL4	100	74.460	Capra_hircus
ENSEEUG00000003649	SALL4	99	77.767	ENSTSYG00000007359	SALL4	92	95.455	Carlito_syrichta
ENSEEUG00000003649	SALL4	99	72.788	ENSCAPG00000012135	SALL4	97	75.347	Cavia_aperea
ENSEEUG00000003649	SALL4	99	75.829	ENSCCAG00000029512	-	100	75.545	Cebus_capucinus
ENSEEUG00000003649	SALL4	99	81.801	ENSCATG00000030757	SALL4	100	82.085	Cercocebus_atys
ENSEEUG00000003649	SALL4	99	77.083	ENSCLAG00000010479	SALL4	100	77.462	Chinchilla_lanigera
ENSEEUG00000003649	SALL4	99	81.611	ENSCSAG00000015269	SALL4	100	81.896	Chlorocebus_sabaeus
ENSEEUG00000003649	SALL4	99	56.201	ENSCPBG00000014995	SALL4	99	56.970	Chrysemys_picta_bellii
ENSEEUG00000003649	SALL4	99	81.611	ENSCANG00000036463	SALL4	100	81.896	Colobus_angolensis_palliatus
ENSEEUG00000003649	SALL4	99	71.254	ENSCGRG00001019569	Sall4	100	72.961	Cricetulus_griseus_chok1gshd
ENSEEUG00000003649	SALL4	99	71.159	ENSCGRG00000000462	Sall4	100	85.185	Cricetulus_griseus_crigri
ENSEEUG00000003649	SALL4	99	42.559	ENSCSEG00000014604	sall4	100	42.524	Cynoglossus_semilaevis
ENSEEUG00000003649	SALL4	99	42.544	ENSCVAG00000010815	sall4	100	43.794	Cyprinodon_variegatus
ENSEEUG00000003649	SALL4	99	42.906	ENSDARG00000044485	sall4	99	42.955	Danio_rerio
ENSEEUG00000003649	SALL4	99	78.848	ENSDNOG00000040633	SALL4	100	79.131	Dasypus_novemcinctus
ENSEEUG00000003649	SALL4	99	66.635	ENSDORG00000012841	Sall4	100	87.356	Dipodomys_ordii
ENSEEUG00000003649	SALL4	70	73.289	ENSETEG00000012475	-	66	73.289	Echinops_telfairi
ENSEEUG00000003649	SALL4	99	84.484	ENSECAG00000018533	SALL4	100	83.633	Equus_caballus
ENSEEUG00000003649	SALL4	99	42.869	ENSELUG00000005696	sall4	100	42.675	Esox_lucius
ENSEEUG00000003649	SALL4	99	79.037	ENSFCAG00000002822	SALL4	100	77.998	Felis_catus
ENSEEUG00000003649	SALL4	99	53.725	ENSFALG00000013149	SALL4	100	53.839	Ficedula_albicollis
ENSEEUG00000003649	SALL4	99	74.456	ENSFDAG00000017812	SALL4	100	74.456	Fukomys_damarensis
ENSEEUG00000003649	SALL4	99	42.882	ENSFHEG00000014187	sall4	100	43.937	Fundulus_heteroclitus
ENSEEUG00000003649	SALL4	99	41.140	ENSGMOG00000003822	sall4	100	41.901	Gadus_morhua
ENSEEUG00000003649	SALL4	99	53.596	ENSGALG00000041365	SALL4	99	55.093	Gallus_gallus
ENSEEUG00000003649	SALL4	99	44.032	ENSGAFG00000019925	sall4	100	44.123	Gambusia_affinis
ENSEEUG00000003649	SALL4	99	39.637	ENSGACG00000011124	sall4	100	41.573	Gasterosteus_aculeatus
ENSEEUG00000003649	SALL4	99	56.113	ENSGAGG00000002297	SALL4	100	55.867	Gopherus_agassizii
ENSEEUG00000003649	SALL4	99	81.896	ENSGGOG00000001832	SALL4	100	82.085	Gorilla_gorilla
ENSEEUG00000003649	SALL4	99	42.301	ENSHBUG00000007327	sall4	100	43.287	Haplochromis_burtoni
ENSEEUG00000003649	SALL4	96	77.515	ENSHGLG00000009043	SALL4	96	77.646	Heterocephalus_glaber_female
ENSEEUG00000003649	SALL4	96	77.613	ENSHGLG00100002722	SALL4	96	77.745	Heterocephalus_glaber_male
ENSEEUG00000003649	SALL4	99	42.358	ENSHCOG00000008519	sall4	100	43.316	Hippocampus_comes
ENSEEUG00000003649	SALL4	99	42.931	ENSIPUG00000019170	sall4	99	43.539	Ictalurus_punctatus
ENSEEUG00000003649	SALL4	69	78.601	ENSSTOG00000025002	SALL4	100	92.958	Ictidomys_tridecemlineatus
ENSEEUG00000003649	SALL4	99	77.663	ENSJJAG00000020688	Sall4	99	97.183	Jaculus_jaculus
ENSEEUG00000003649	SALL4	99	42.170	ENSKMAG00000002501	sall4	100	43.421	Kryptolebias_marmoratus
ENSEEUG00000003649	SALL4	99	42.633	ENSLBEG00000019951	sall4	100	44.049	Labrus_bergylta
ENSEEUG00000003649	SALL4	94	45.802	ENSLACG00000013898	SALL4	100	60.417	Latimeria_chalumnae
ENSEEUG00000003649	SALL4	99	46.280	ENSLOCG00000002427	sall4	100	46.087	Lepisosteus_oculatus
ENSEEUG00000003649	SALL4	99	79.830	ENSLAFG00000004309	SALL4	100	80.019	Loxodonta_africana
ENSEEUG00000003649	SALL4	99	81.706	ENSMFAG00000027169	SALL4	100	81.991	Macaca_fascicularis
ENSEEUG00000003649	SALL4	90	82.267	ENSMMUG00000003870	SALL4	100	84.914	Macaca_mulatta
ENSEEUG00000003649	SALL4	90	82.371	ENSMNEG00000035995	SALL4	100	82.686	Macaca_nemestrina
ENSEEUG00000003649	SALL4	99	81.611	ENSMLEG00000030467	SALL4	100	81.801	Mandrillus_leucophaeus
ENSEEUG00000003649	SALL4	99	43.707	ENSMAMG00000005223	sall4	100	44.236	Mastacembelus_armatus
ENSEEUG00000003649	SALL4	99	42.820	ENSMZEG00005023418	sall4	100	44.174	Maylandia_zebra
ENSEEUG00000003649	SALL4	79	65.385	ENSMGAG00000009344	SALL4	99	65.385	Meleagris_gallopavo
ENSEEUG00000003649	SALL4	99	70.649	ENSMAUG00000015814	Sall4	100	78.313	Mesocricetus_auratus
ENSEEUG00000003649	SALL4	99	80.492	ENSMICG00000000027	SALL4	93	100.000	Microcebus_murinus
ENSEEUG00000003649	SALL4	99	72.872	ENSMOCG00000018245	Sall4	100	91.781	Microtus_ochrogaster
ENSEEUG00000003649	SALL4	99	42.472	ENSMMOG00000014929	sall4	100	43.093	Mola_mola
ENSEEUG00000003649	SALL4	99	58.850	ENSMODG00000016387	SALL4	97	58.786	Monodelphis_domestica
ENSEEUG00000003649	SALL4	99	43.316	ENSMALG00000018709	sall4	100	43.365	Monopterus_albus
ENSEEUG00000003649	SALL4	99	70.084	MGP_CAROLIEiJ_G0024723	Sall4	100	95.833	Mus_caroli
ENSEEUG00000003649	SALL4	99	70.298	ENSMUSG00000027547	Sall4	100	95.833	Mus_musculus
ENSEEUG00000003649	SALL4	99	68.975	MGP_PahariEiJ_G0026164	Sall4	100	95.833	Mus_pahari
ENSEEUG00000003649	SALL4	99	70.495	MGP_SPRETEiJ_G0025643	Sall4	100	95.833	Mus_spretus
ENSEEUG00000003649	SALL4	99	81.321	ENSMPUG00000017543	SALL4	96	80.566	Mustela_putorius_furo
ENSEEUG00000003649	SALL4	96	80.671	ENSMLUG00000007060	-	99	80.632	Myotis_lucifugus
ENSEEUG00000003649	SALL4	99	59.508	ENSMLUG00000028073	-	99	58.751	Myotis_lucifugus
ENSEEUG00000003649	SALL4	99	72.545	ENSMLUG00000008405	-	100	72.545	Myotis_lucifugus
ENSEEUG00000003649	SALL4	99	74.976	ENSNGAG00000017833	Sall4	100	75.000	Nannospalax_galili
ENSEEUG00000003649	SALL4	99	42.427	ENSNBRG00000001829	sall4	100	43.530	Neolamprologus_brichardi
ENSEEUG00000003649	SALL4	99	81.137	ENSNLEG00000007013	SALL4	100	81.422	Nomascus_leucogenys
ENSEEUG00000003649	SALL4	82	65.385	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSEEUG00000003649	SALL4	99	76.836	ENSOPRG00000011640	SALL4	100	75.706	Ochotona_princeps
ENSEEUG00000003649	SALL4	99	42.314	ENSONIG00000016557	sall4	100	43.377	Oreochromis_niloticus
ENSEEUG00000003649	SALL4	99	58.871	ENSOANG00000008667	SALL4	97	58.393	Ornithorhynchus_anatinus
ENSEEUG00000003649	SALL4	96	75.737	ENSOCUG00000011797	SALL4	99	75.689	Oryctolagus_cuniculus
ENSEEUG00000003649	SALL4	99	42.321	ENSORLG00000016130	sall4	100	43.482	Oryzias_latipes
ENSEEUG00000003649	SALL4	99	42.540	ENSORLG00020007339	sall4	100	43.722	Oryzias_latipes_hni
ENSEEUG00000003649	SALL4	99	42.513	ENSORLG00015002265	sall4	100	43.583	Oryzias_latipes_hsok
ENSEEUG00000003649	SALL4	99	42.565	ENSOMEG00000017344	sall4	100	43.301	Oryzias_melastigma
ENSEEUG00000003649	SALL4	94	80.039	ENSOGAG00000013799	SALL4	99	79.804	Otolemur_garnettii
ENSEEUG00000003649	SALL4	99	70.667	ENSOARG00000014570	SALL4	100	70.667	Ovis_aries
ENSEEUG00000003649	SALL4	99	81.991	ENSPPAG00000038064	SALL4	100	81.896	Pan_paniscus
ENSEEUG00000003649	SALL4	99	79.131	ENSPPRG00000008677	SALL4	100	78.093	Panthera_pardus
ENSEEUG00000003649	SALL4	99	81.706	ENSPTRG00000013631	SALL4	100	81.896	Pan_troglodytes
ENSEEUG00000003649	SALL4	90	82.371	ENSPANG00000021792	SALL4	100	82.686	Papio_anubis
ENSEEUG00000003649	SALL4	99	42.267	ENSPKIG00000007074	sall4	100	43.194	Paramormyrops_kingsleyae
ENSEEUG00000003649	SALL4	99	55.429	ENSPSIG00000009066	SALL4	100	55.468	Pelodiscus_sinensis
ENSEEUG00000003649	SALL4	99	41.883	ENSPMGG00000022551	sall4	100	42.370	Periophthalmus_magnuspinnatus
ENSEEUG00000003649	SALL4	99	73.778	ENSPEMG00000022706	Sall4	100	94.444	Peromyscus_maniculatus_bairdii
ENSEEUG00000003649	SALL4	99	58.076	ENSPCIG00000022838	SALL4	97	57.699	Phascolarctos_cinereus
ENSEEUG00000003649	SALL4	99	43.059	ENSPFOG00000001442	sall4	100	43.993	Poecilia_formosa
ENSEEUG00000003649	SALL4	99	42.971	ENSPLAG00000008760	sall4	100	43.905	Poecilia_latipinna
ENSEEUG00000003649	SALL4	99	43.198	ENSPMEG00000008497	sall4	100	44.307	Poecilia_mexicana
ENSEEUG00000003649	SALL4	99	42.970	ENSPREG00000021140	sall4	100	43.937	Poecilia_reticulata
ENSEEUG00000003649	SALL4	99	81.517	ENSPPYG00000011138	SALL4	100	81.422	Pongo_abelii
ENSEEUG00000003649	SALL4	100	74.127	ENSPCAG00000004726	SALL4	100	75.071	Procavia_capensis
ENSEEUG00000003649	SALL4	99	81.689	ENSPCOG00000016321	SALL4	92	100.000	Propithecus_coquereli
ENSEEUG00000003649	SALL4	94	80.485	ENSPVAG00000002075	SALL4	94	80.485	Pteropus_vampyrus
ENSEEUG00000003649	SALL4	99	42.348	ENSPNYG00000021738	sall4	100	43.339	Pundamilia_nyererei
ENSEEUG00000003649	SALL4	99	42.311	ENSPNAG00000020929	sall4	99	43.406	Pygocentrus_nattereri
ENSEEUG00000003649	SALL4	99	70.167	ENSRNOG00000050035	Sall4	100	70.539	Rattus_norvegicus
ENSEEUG00000003649	SALL4	99	81.327	ENSRBIG00000039876	SALL4	100	82.371	Rhinopithecus_bieti
ENSEEUG00000003649	SALL4	99	81.422	ENSRROG00000036585	SALL4	100	81.706	Rhinopithecus_roxellana
ENSEEUG00000003649	SALL4	99	80.664	ENSSBOG00000030011	SALL4	92	95.455	Saimiri_boliviensis_boliviensis
ENSEEUG00000003649	SALL4	98	68.075	ENSSHAG00000018013	SALL4	88	68.075	Sarcophilus_harrisii
ENSEEUG00000003649	SALL4	99	43.260	ENSSFOG00015021075	sall4	100	44.297	Scleropages_formosus
ENSEEUG00000003649	SALL4	99	43.069	ENSSMAG00000019218	sall4	99	43.241	Scophthalmus_maximus
ENSEEUG00000003649	SALL4	99	43.875	ENSSDUG00000004657	sall4	100	43.913	Seriola_dumerili
ENSEEUG00000003649	SALL4	99	43.761	ENSSLDG00000004973	sall4	100	43.896	Seriola_lalandi_dorsalis
ENSEEUG00000003649	SALL4	99	42.531	ENSSPAG00000001978	sall4	100	43.570	Stegastes_partitus
ENSEEUG00000003649	SALL4	99	80.624	ENSSSCG00000007479	SALL4	100	79.868	Sus_scrofa
ENSEEUG00000003649	SALL4	99	42.794	ENSTRUG00000007410	sall4	100	43.497	Takifugu_rubripes
ENSEEUG00000003649	SALL4	99	42.491	ENSTNIG00000012460	sall4	99	43.471	Tetraodon_nigroviridis
ENSEEUG00000003649	SALL4	96	78.890	ENSTTRG00000007753	SALL4	99	79.187	Tursiops_truncatus
ENSEEUG00000003649	SALL4	99	82.153	ENSUAMG00000010113	SALL4	100	81.775	Ursus_americanus
ENSEEUG00000003649	SALL4	96	81.078	ENSUMAG00000024274	SALL4	99	81.041	Ursus_maritimus
ENSEEUG00000003649	SALL4	99	49.014	ENSXETG00000012326	sall4	100	48.750	Xenopus_tropicalis
ENSEEUG00000003649	SALL4	99	40.656	ENSXCOG00000015467	sall4	100	41.734	Xiphophorus_couchianus
ENSEEUG00000003649	SALL4	99	42.024	ENSXMAG00000012692	sall4	100	41.915	Xiphophorus_maculatus