EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000003793 (Gene tree)
Gene ID: -
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 51185 bases
Position: chrGeneScaffold_4370:8621-59805
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000003508	ResIII	PF04851.15	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003846	SBNO1-201	4176	-	ENSEEUP00000003508	1392 (aa)	-	UPI0000F629E1

Gene Model

Click here to download ENSEEUG00000003793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003793's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003793	SBNO1	83	98.352	ENSG00000139697	SBNO1	83	98.352	Homo_sapiens
ENSEEUG00000003793	SBNO1	68	82.038	ENSAPOG00000003196	sbno1	82	82.420	Acanthochromis_polyacanthus
ENSEEUG00000003793	SBNO1	83	99.451	ENSAMEG00000015151	SBNO1	83	99.451	Ailuropoda_melanoleuca
ENSEEUG00000003793	SBNO1	80	76.503	ENSACIG00000008088	sbno1	83	76.503	Amphilophus_citrinellus
ENSEEUG00000003793	SBNO1	81	76.503	ENSAOCG00000014859	sbno1	80	76.503	Amphiprion_ocellaris
ENSEEUG00000003793	SBNO1	81	76.503	ENSAPEG00000006069	sbno1	80	76.503	Amphiprion_percula
ENSEEUG00000003793	SBNO1	82	79.781	ENSATEG00000006667	sbno1	83	79.781	Anabas_testudineus
ENSEEUG00000003793	SBNO1	83	92.308	ENSAPLG00000015674	SBNO1	83	92.308	Anas_platyrhynchos
ENSEEUG00000003793	SBNO1	80	91.209	ENSACAG00000015441	SBNO1	72	91.209	Anolis_carolinensis
ENSEEUG00000003793	SBNO1	83	97.802	ENSANAG00000029958	-	83	97.802	Aotus_nancymaae
ENSEEUG00000003793	SBNO1	76	77.049	ENSACLG00000024913	sbno1	81	77.278	Astatotilapia_calliptera
ENSEEUG00000003793	SBNO1	82	80.874	ENSAMXG00000019473	sbno1	82	80.874	Astyanax_mexicanus
ENSEEUG00000003793	SBNO1	83	97.814	ENSBTAG00000020505	SBNO1	83	97.814	Bos_taurus
ENSEEUG00000003793	SBNO1	83	98.352	ENSCJAG00000016599	SBNO1	83	98.352	Callithrix_jacchus
ENSEEUG00000003793	SBNO1	83	99.451	ENSCAFG00000007503	SBNO1	87	99.270	Canis_familiaris
ENSEEUG00000003793	SBNO1	83	99.451	ENSCAFG00020015363	SBNO1	82	99.451	Canis_lupus_dingo
ENSEEUG00000003793	SBNO1	83	97.814	ENSCHIG00000008382	SBNO1	83	97.814	Capra_hircus
ENSEEUG00000003793	SBNO1	83	98.901	ENSTSYG00000012749	SBNO1	83	98.901	Carlito_syrichta
ENSEEUG00000003793	SBNO1	77	99.451	ENSCAPG00000000384	SBNO1	80	99.451	Cavia_aperea
ENSEEUG00000003793	SBNO1	83	99.451	ENSCPOG00000008109	SBNO1	83	99.451	Cavia_porcellus
ENSEEUG00000003793	SBNO1	83	98.352	ENSCCAG00000035316	SBNO1	82	98.352	Cebus_capucinus
ENSEEUG00000003793	SBNO1	81	98.352	ENSCATG00000008239	SBNO1	82	98.352	Cercocebus_atys
ENSEEUG00000003793	SBNO1	83	99.451	ENSCLAG00000008995	SBNO1	83	99.451	Chinchilla_lanigera
ENSEEUG00000003793	SBNO1	73	98.352	ENSCSAG00000002064	SBNO1	88	98.352	Chlorocebus_sabaeus
ENSEEUG00000003793	SBNO1	78	91.859	ENSCHOG00000008814	SBNO1	78	91.859	Choloepus_hoffmanni
ENSEEUG00000003793	SBNO1	83	91.758	ENSCPBG00000025968	SBNO1	81	91.758	Chrysemys_picta_bellii
ENSEEUG00000003793	SBNO1	82	96.703	ENSCANG00000042688	-	83	96.703	Colobus_angolensis_palliatus
ENSEEUG00000003793	SBNO1	83	97.814	ENSCGRG00001017470	Sbno1	83	97.814	Cricetulus_griseus_chok1gshd
ENSEEUG00000003793	SBNO1	83	97.814	ENSCGRG00000004756	Sbno1	83	97.814	Cricetulus_griseus_crigri
ENSEEUG00000003793	SBNO1	82	76.374	ENSCSEG00000011919	sbno1	83	76.374	Cynoglossus_semilaevis
ENSEEUG00000003793	SBNO1	82	76.503	ENSCVAG00000007038	sbno1	81	76.949	Cyprinodon_variegatus
ENSEEUG00000003793	SBNO1	81	81.564	ENSDARG00000099080	sbno1	82	81.564	Danio_rerio
ENSEEUG00000003793	SBNO1	82	97.802	ENSDNOG00000017147	SBNO1	88	91.707	Dasypus_novemcinctus
ENSEEUG00000003793	SBNO1	76	100.000	ENSDORG00000015261	Sbno1	80	100.000	Dipodomys_ordii
ENSEEUG00000003793	SBNO1	76	97.802	ENSETEG00000005620	SBNO1	76	97.802	Echinops_telfairi
ENSEEUG00000003793	SBNO1	61	65.730	ENSEBUG00000013823	sbno1	82	65.354	Eptatretus_burgeri
ENSEEUG00000003793	SBNO1	83	100.000	ENSECAG00000006127	SBNO1	83	100.000	Equus_caballus
ENSEEUG00000003793	SBNO1	82	83.060	ENSELUG00000002886	sbno1	82	83.060	Esox_lucius
ENSEEUG00000003793	SBNO1	83	99.451	ENSFCAG00000015331	SBNO1	83	99.451	Felis_catus
ENSEEUG00000003793	SBNO1	83	92.308	ENSFALG00000009273	SBNO1	83	92.308	Ficedula_albicollis
ENSEEUG00000003793	SBNO1	83	99.454	ENSFDAG00000014232	SBNO1	83	99.454	Fukomys_damarensis
ENSEEUG00000003793	SBNO1	82	77.049	ENSFHEG00000007360	sbno1	81	77.049	Fundulus_heteroclitus
ENSEEUG00000003793	SBNO1	76	79.096	ENSGMOG00000018229	sbno1	82	79.096	Gadus_morhua
ENSEEUG00000003793	SBNO1	70	87.753	ENSGALG00000003392	SBNO1	78	87.416	Gallus_gallus
ENSEEUG00000003793	SBNO1	82	77.049	ENSGAFG00000003960	sbno1	81	77.049	Gambusia_affinis
ENSEEUG00000003793	SBNO1	77	80.226	ENSGACG00000015633	sbno1	81	80.226	Gasterosteus_aculeatus
ENSEEUG00000003793	SBNO1	79	92.996	ENSGAGG00000001065	SBNO1	76	96.996	Gopherus_agassizii
ENSEEUG00000003793	SBNO1	83	98.352	ENSGGOG00000015000	SBNO1	84	98.352	Gorilla_gorilla
ENSEEUG00000003793	SBNO1	75	77.146	ENSHBUG00000011910	sbno1	84	77.163	Haplochromis_burtoni
ENSEEUG00000003793	SBNO1	83	98.901	ENSHGLG00000014165	-	83	98.901	Heterocephalus_glaber_female
ENSEEUG00000003793	SBNO1	68	90.948	ENSHCOG00000003246	sbno1	73	90.948	Hippocampus_comes
ENSEEUG00000003793	SBNO1	82	79.781	ENSIPUG00000015830	Sbno1	81	79.781	Ictalurus_punctatus
ENSEEUG00000003793	SBNO1	83	98.901	ENSSTOG00000023221	SBNO1	83	98.901	Ictidomys_tridecemlineatus
ENSEEUG00000003793	SBNO1	83	97.802	ENSJJAG00000001741	Sbno1	82	99.142	Jaculus_jaculus
ENSEEUG00000003793	SBNO1	82	76.503	ENSKMAG00000009696	sbno1	81	77.654	Kryptolebias_marmoratus
ENSEEUG00000003793	SBNO1	82	79.781	ENSLBEG00000007623	sbno1	83	79.781	Labrus_bergylta
ENSEEUG00000003793	SBNO1	81	81.585	ENSLACG00000017227	SBNO1	81	81.696	Latimeria_chalumnae
ENSEEUG00000003793	SBNO1	82	85.246	ENSLOCG00000005725	sbno1	81	85.246	Lepisosteus_oculatus
ENSEEUG00000003793	SBNO1	83	96.703	ENSLAFG00000002135	SBNO1	83	96.703	Loxodonta_africana
ENSEEUG00000003793	SBNO1	83	98.352	ENSMFAG00000031429	SBNO1	83	98.352	Macaca_fascicularis
ENSEEUG00000003793	SBNO1	83	98.352	ENSMMUG00000011496	SBNO1	83	98.352	Macaca_mulatta
ENSEEUG00000003793	SBNO1	82	98.352	ENSMLEG00000033260	SBNO1	84	98.352	Mandrillus_leucophaeus
ENSEEUG00000003793	SBNO1	82	79.235	ENSMAMG00000005473	sbno1	82	79.235	Mastacembelus_armatus
ENSEEUG00000003793	SBNO1	83	92.308	ENSMGAG00000003274	SBNO1	83	92.308	Meleagris_gallopavo
ENSEEUG00000003793	SBNO1	83	98.352	ENSMICG00000006573	-	82	98.352	Microcebus_murinus
ENSEEUG00000003793	SBNO1	83	97.268	ENSMOCG00000009390	Sbno1	82	97.268	Microtus_ochrogaster
ENSEEUG00000003793	SBNO1	77	77.596	ENSMMOG00000008691	sbno1	82	77.596	Mola_mola
ENSEEUG00000003793	SBNO1	83	96.154	ENSMODG00000012470	SBNO1	81	96.154	Monodelphis_domestica
ENSEEUG00000003793	SBNO1	82	75.956	ENSMALG00000001056	sbno1	84	75.956	Monopterus_albus
ENSEEUG00000003793	SBNO1	83	98.352	MGP_CAROLIEiJ_G0027749	Sbno1	83	98.352	Mus_caroli
ENSEEUG00000003793	SBNO1	83	98.352	ENSMUSG00000038095	Sbno1	83	98.352	Mus_musculus
ENSEEUG00000003793	SBNO1	83	97.253	MGP_PahariEiJ_G0024329	Sbno1	83	97.253	Mus_pahari
ENSEEUG00000003793	SBNO1	83	98.352	MGP_SPRETEiJ_G0028747	Sbno1	83	98.352	Mus_spretus
ENSEEUG00000003793	SBNO1	83	99.451	ENSMPUG00000001658	SBNO1	83	99.451	Mustela_putorius_furo
ENSEEUG00000003793	SBNO1	83	98.901	ENSMLUG00000017159	SBNO1	83	98.901	Myotis_lucifugus
ENSEEUG00000003793	SBNO1	83	97.802	ENSNGAG00000012620	Sbno1	83	97.802	Nannospalax_galili
ENSEEUG00000003793	SBNO1	77	77.049	ENSNBRG00000019189	sbno1	83	77.049	Neolamprologus_brichardi
ENSEEUG00000003793	SBNO1	81	91.395	ENSNLEG00000001502	SBNO1	81	97.549	Nomascus_leucogenys
ENSEEUG00000003793	SBNO1	59	86.076	ENSMEUG00000008768	-	82	89.241	Notamacropus_eugenii
ENSEEUG00000003793	SBNO1	83	98.901	ENSOPRG00000011054	SBNO1	83	98.901	Ochotona_princeps
ENSEEUG00000003793	SBNO1	83	98.901	ENSODEG00000009997	SBNO1	83	98.901	Octodon_degus
ENSEEUG00000003793	SBNO1	82	76.503	ENSONIG00000015348	sbno1	82	76.503	Oreochromis_niloticus
ENSEEUG00000003793	SBNO1	81	91.789	ENSOCUG00000002441	SBNO1	78	91.789	Oryctolagus_cuniculus
ENSEEUG00000003793	SBNO1	82	77.049	ENSORLG00000001593	sbno1	81	77.049	Oryzias_latipes
ENSEEUG00000003793	SBNO1	82	77.596	ENSORLG00020015216	sbno1	81	77.596	Oryzias_latipes_hni
ENSEEUG00000003793	SBNO1	82	77.596	ENSORLG00015002726	sbno1	81	77.596	Oryzias_latipes_hsok
ENSEEUG00000003793	SBNO1	77	77.778	ENSOMEG00000019313	sbno1	80	77.778	Oryzias_melastigma
ENSEEUG00000003793	SBNO1	83	97.814	ENSOARG00000004404	SBNO1	83	97.814	Ovis_aries
ENSEEUG00000003793	SBNO1	83	97.802	ENSPPAG00000024635	SBNO1	84	97.802	Pan_paniscus
ENSEEUG00000003793	SBNO1	83	99.451	ENSPPRG00000022092	SBNO1	83	99.451	Panthera_pardus
ENSEEUG00000003793	SBNO1	83	99.451	ENSPTIG00000017803	SBNO1	83	99.451	Panthera_tigris_altaica
ENSEEUG00000003793	SBNO1	83	98.352	ENSPTRG00000005597	SBNO1	84	98.352	Pan_troglodytes
ENSEEUG00000003793	SBNO1	83	98.352	ENSPANG00000011640	SBNO1	84	98.352	Papio_anubis
ENSEEUG00000003793	SBNO1	82	80.874	ENSPKIG00000001441	sbno1	82	80.874	Paramormyrops_kingsleyae
ENSEEUG00000003793	SBNO1	70	92.257	ENSPSIG00000009256	-	76	92.257	Pelodiscus_sinensis
ENSEEUG00000003793	SBNO1	83	90.659	ENSPSIG00000009572	-	83	90.659	Pelodiscus_sinensis
ENSEEUG00000003793	SBNO1	83	97.814	ENSPEMG00000016087	Sbno1	83	97.814	Peromyscus_maniculatus_bairdii
ENSEEUG00000003793	SBNO1	83	95.604	ENSPCIG00000010985	SBNO1	83	95.604	Phascolarctos_cinereus
ENSEEUG00000003793	SBNO1	82	77.596	ENSPFOG00000005069	sbno1	81	77.596	Poecilia_formosa
ENSEEUG00000003793	SBNO1	82	77.596	ENSPLAG00000015015	sbno1	81	77.596	Poecilia_latipinna
ENSEEUG00000003793	SBNO1	82	77.596	ENSPMEG00000021212	sbno1	81	77.596	Poecilia_mexicana
ENSEEUG00000003793	SBNO1	82	77.596	ENSPREG00000017746	sbno1	81	77.596	Poecilia_reticulata
ENSEEUG00000003793	SBNO1	83	98.352	ENSPPYG00000005084	SBNO1	83	98.352	Pongo_abelii
ENSEEUG00000003793	SBNO1	71	97.802	ENSPCAG00000008634	SBNO1	71	97.802	Procavia_capensis
ENSEEUG00000003793	SBNO1	83	97.802	ENSPCOG00000024277	SBNO1	83	97.802	Propithecus_coquereli
ENSEEUG00000003793	SBNO1	70	99.451	ENSPVAG00000015304	SBNO1	70	99.451	Pteropus_vampyrus
ENSEEUG00000003793	SBNO1	82	77.049	ENSPNYG00000004291	sbno1	83	77.049	Pundamilia_nyererei
ENSEEUG00000003793	SBNO1	82	82.514	ENSPNAG00000015622	sbno1	82	82.514	Pygocentrus_nattereri
ENSEEUG00000003793	SBNO1	83	97.814	ENSRNOG00000001064	Sbno1	83	97.814	Rattus_norvegicus
ENSEEUG00000003793	SBNO1	83	98.352	ENSRROG00000034230	SBNO1	84	98.352	Rhinopithecus_roxellana
ENSEEUG00000003793	SBNO1	72	98.352	ENSSBOG00000015422	SBNO1	80	98.352	Saimiri_boliviensis_boliviensis
ENSEEUG00000003793	SBNO1	82	81.967	ENSSFOG00015019025	sbno1	83	81.967	Scleropages_formosus
ENSEEUG00000003793	SBNO1	82	78.571	ENSSMAG00000013640	sbno1	83	78.571	Scophthalmus_maximus
ENSEEUG00000003793	SBNO1	82	78.142	ENSSDUG00000023480	sbno1	81	78.142	Seriola_dumerili
ENSEEUG00000003793	SBNO1	82	78.142	ENSSLDG00000007928	sbno1	81	78.142	Seriola_lalandi_dorsalis
ENSEEUG00000003793	SBNO1	72	98.993	ENSSARG00000002594	SBNO1	72	98.993	Sorex_araneus
ENSEEUG00000003793	SBNO1	80	89.560	ENSSPUG00000012640	SBNO1	82	89.560	Sphenodon_punctatus
ENSEEUG00000003793	SBNO1	82	77.596	ENSSPAG00000016244	sbno1	81	77.596	Stegastes_partitus
ENSEEUG00000003793	SBNO1	83	100.000	ENSSSCG00000009776	SBNO1	84	100.000	Sus_scrofa
ENSEEUG00000003793	SBNO1	83	92.308	ENSTGUG00000005380	SBNO1	83	92.308	Taeniopygia_guttata
ENSEEUG00000003793	SBNO1	82	77.654	ENSTRUG00000018490	sbno1	83	77.654	Takifugu_rubripes
ENSEEUG00000003793	SBNO1	83	99.451	ENSUAMG00000019671	SBNO1	83	99.451	Ursus_americanus
ENSEEUG00000003793	SBNO1	83	99.451	ENSUMAG00000004002	SBNO1	83	99.451	Ursus_maritimus
ENSEEUG00000003793	SBNO1	72	100.000	ENSVPAG00000007024	SBNO1	72	100.000	Vicugna_pacos
ENSEEUG00000003793	SBNO1	83	99.451	ENSVVUG00000027807	SBNO1	83	99.451	Vulpes_vulpes
ENSEEUG00000003793	SBNO1	83	88.398	ENSXETG00000031930	SBNO1	83	88.398	Xenopus_tropicalis
ENSEEUG00000003793	SBNO1	69	76.425	ENSXCOG00000011607	sbno1	83	73.385	Xiphophorus_couchianus
ENSEEUG00000003793	SBNO1	82	76.760	ENSXMAG00000002140	sbno1	81	76.940	Xiphophorus_maculatus