EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000003871 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 111812 bases
Position: chrGeneScaffold_3815:19524-131335
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000003551	PUF	PF00806.19	1.1e-71	1	8
ENSEEUP00000003551	PUF	PF00806.19	1.1e-71	2	8
ENSEEUP00000003551	PUF	PF00806.19	1.1e-71	3	8
ENSEEUP00000003551	PUF	PF00806.19	1.1e-71	4	8
ENSEEUP00000003551	PUF	PF00806.19	1.1e-71	5	8
ENSEEUP00000003551	PUF	PF00806.19	1.1e-71	6	8
ENSEEUP00000003551	PUF	PF00806.19	1.1e-71	7	8
ENSEEUP00000003551	PUF	PF00806.19	1.1e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003897	PUM1-201	3666	-	ENSEEUP00000003551	1221 (aa)	-	UPI0000F63A66

Gene Model

Click here to download ENSEEUG00000003871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003871	PUM1	77	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSEEUG00000003871	PUM1	74	91.111	ENSAPOG00000021632	pum1	76	90.667	Acanthochromis_polyacanthus
ENSEEUG00000003871	PUM1	77	99.778	ENSAMEG00000017656	PUM1	77	99.778	Ailuropoda_melanoleuca
ENSEEUG00000003871	PUM1	74	90.667	ENSACIG00000021013	pum1	76	90.222	Amphilophus_citrinellus
ENSEEUG00000003871	PUM1	74	91.111	ENSAOCG00000003944	pum1	76	90.843	Amphiprion_ocellaris
ENSEEUG00000003871	PUM1	74	91.111	ENSAPEG00000014550	pum1	76	90.843	Amphiprion_percula
ENSEEUG00000003871	PUM1	74	91.111	ENSATEG00000016004	pum1	76	90.843	Anabas_testudineus
ENSEEUG00000003871	PUM1	74	99.111	ENSAPLG00000009351	PUM1	76	99.111	Anas_platyrhynchos
ENSEEUG00000003871	PUM1	75	99.333	ENSACAG00000000682	PUM1	75	99.333	Anolis_carolinensis
ENSEEUG00000003871	PUM1	74	100.000	ENSANAG00000027865	PUM1	80	100.000	Aotus_nancymaae
ENSEEUG00000003871	PUM1	64	90.667	ENSACLG00000019354	pum1	74	90.222	Astatotilapia_calliptera
ENSEEUG00000003871	PUM1	75	92.667	ENSAMXG00000020607	pum1	74	92.667	Astyanax_mexicanus
ENSEEUG00000003871	PUM1	74	100.000	ENSBTAG00000018979	PUM1	80	100.000	Bos_taurus
ENSEEUG00000003871	PUM1	74	100.000	ENSCJAG00000006035	PUM1	80	100.000	Callithrix_jacchus
ENSEEUG00000003871	PUM1	74	99.778	ENSCAFG00000011205	PUM1	78	99.778	Canis_familiaris
ENSEEUG00000003871	PUM1	67	99.778	ENSCAFG00020024616	PUM1	76	100.000	Canis_lupus_dingo
ENSEEUG00000003871	PUM1	74	100.000	ENSCHIG00000012952	PUM1	79	100.000	Capra_hircus
ENSEEUG00000003871	PUM1	74	100.000	ENSTSYG00000008868	PUM1	80	100.000	Carlito_syrichta
ENSEEUG00000003871	PUM1	74	99.322	ENSCPOG00000031613	PUM1	80	99.383	Cavia_porcellus
ENSEEUG00000003871	PUM1	74	100.000	ENSCATG00000017991	PUM1	80	100.000	Cercocebus_atys
ENSEEUG00000003871	PUM1	74	99.661	ENSCLAG00000007662	PUM1	80	99.383	Chinchilla_lanigera
ENSEEUG00000003871	PUM1	74	100.000	ENSCSAG00000001028	PUM1	77	100.000	Chlorocebus_sabaeus
ENSEEUG00000003871	PUM1	71	96.309	ENSCHOG00000010245	PUM1	73	96.309	Choloepus_hoffmanni
ENSEEUG00000003871	PUM1	75	99.111	ENSCPBG00000009288	PUM1	80	98.667	Chrysemys_picta_bellii
ENSEEUG00000003871	PUM1	77	100.000	ENSCANG00000042606	PUM1	80	100.000	Colobus_angolensis_palliatus
ENSEEUG00000003871	PUM1	74	99.322	ENSCGRG00001024949	Pum1	80	99.306	Cricetulus_griseus_chok1gshd
ENSEEUG00000003871	PUM1	74	99.322	ENSCGRG00000014197	Pum1	80	99.306	Cricetulus_griseus_crigri
ENSEEUG00000003871	PUM1	64	90.667	ENSCSEG00000015981	pum1	74	90.222	Cynoglossus_semilaevis
ENSEEUG00000003871	PUM1	74	90.244	ENSCVAG00000007043	pum1	76	89.800	Cyprinodon_variegatus
ENSEEUG00000003871	PUM1	74	92.889	ENSDARG00000099256	pum1	77	92.889	Danio_rerio
ENSEEUG00000003871	PUM1	74	100.000	ENSDNOG00000010939	PUM1	76	100.000	Dasypus_novemcinctus
ENSEEUG00000003871	PUM1	61	99.415	ENSDORG00000001875	Pum1	76	99.415	Dipodomys_ordii
ENSEEUG00000003871	PUM1	65	98.851	ENSETEG00000004355	PUM1	63	98.851	Echinops_telfairi
ENSEEUG00000003871	PUM1	74	100.000	ENSEASG00005010813	PUM1	76	100.000	Equus_asinus_asinus
ENSEEUG00000003871	PUM1	74	100.000	ENSECAG00000021369	PUM1	81	100.000	Equus_caballus
ENSEEUG00000003871	PUM1	74	92.667	ENSELUG00000002409	pum1	80	92.222	Esox_lucius
ENSEEUG00000003871	PUM1	74	100.000	ENSFCAG00000010374	PUM1	82	100.000	Felis_catus
ENSEEUG00000003871	PUM1	77	99.333	ENSFALG00000001214	PUM1	76	99.333	Ficedula_albicollis
ENSEEUG00000003871	PUM1	74	99.661	ENSFDAG00000011319	PUM1	80	99.306	Fukomys_damarensis
ENSEEUG00000003871	PUM1	74	90.687	ENSGMOG00000010491	pum1	76	90.244	Gadus_morhua
ENSEEUG00000003871	PUM1	74	99.333	ENSGALG00000042598	PUM1	83	99.333	Gallus_gallus
ENSEEUG00000003871	PUM1	74	90.444	ENSGAFG00000015617	pum1	76	90.120	Gambusia_affinis
ENSEEUG00000003871	PUM1	74	90.889	ENSGACG00000005717	pum1	76	90.444	Gasterosteus_aculeatus
ENSEEUG00000003871	PUM1	74	99.111	ENSGAGG00000001290	PUM1	83	99.111	Gopherus_agassizii
ENSEEUG00000003871	PUM1	75	100.000	ENSGGOG00000011983	PUM1	80	100.000	Gorilla_gorilla
ENSEEUG00000003871	PUM1	74	90.667	ENSHBUG00000018718	pum1	76	90.222	Haplochromis_burtoni
ENSEEUG00000003871	PUM1	74	99.322	ENSHGLG00000013819	Pum1	80	99.383	Heterocephalus_glaber_female
ENSEEUG00000003871	PUM1	74	99.322	ENSHGLG00100008621	Pum1	80	99.383	Heterocephalus_glaber_male
ENSEEUG00000003871	PUM1	64	83.742	ENSHCOG00000005149	pum1	67	93.646	Hippocampus_comes
ENSEEUG00000003871	PUM1	74	91.778	ENSIPUG00000020421	pum1	77	91.778	Ictalurus_punctatus
ENSEEUG00000003871	PUM1	74	100.000	ENSSTOG00000010757	PUM1	80	100.000	Ictidomys_tridecemlineatus
ENSEEUG00000003871	PUM1	74	100.000	ENSJJAG00000000530	Pum1	80	100.000	Jaculus_jaculus
ENSEEUG00000003871	PUM1	74	90.444	ENSKMAG00000003481	pum1	76	90.000	Kryptolebias_marmoratus
ENSEEUG00000003871	PUM1	74	91.111	ENSLBEG00000002527	pum1	76	90.667	Labrus_bergylta
ENSEEUG00000003871	PUM1	75	90.798	ENSLACG00000017188	PUM1	76	90.798	Latimeria_chalumnae
ENSEEUG00000003871	PUM1	74	96.000	ENSLOCG00000005210	pum1	77	96.000	Lepisosteus_oculatus
ENSEEUG00000003871	PUM1	74	99.333	ENSLAFG00000003178	PUM1	76	99.333	Loxodonta_africana
ENSEEUG00000003871	PUM1	74	100.000	ENSMFAG00000010291	PUM1	80	100.000	Macaca_fascicularis
ENSEEUG00000003871	PUM1	74	100.000	ENSMMUG00000013520	PUM1	80	100.000	Macaca_mulatta
ENSEEUG00000003871	PUM1	74	100.000	ENSMNEG00000034639	PUM1	80	100.000	Macaca_nemestrina
ENSEEUG00000003871	PUM1	77	100.000	ENSMLEG00000038743	PUM1	80	100.000	Mandrillus_leucophaeus
ENSEEUG00000003871	PUM1	74	90.667	ENSMAMG00000011606	pum1	76	90.222	Mastacembelus_armatus
ENSEEUG00000003871	PUM1	74	90.667	ENSMZEG00005005834	pum1	76	90.222	Maylandia_zebra
ENSEEUG00000003871	PUM1	75	99.333	ENSMGAG00000000724	PUM1	76	99.333	Meleagris_gallopavo
ENSEEUG00000003871	PUM1	74	99.322	ENSMAUG00000022090	Pum1	80	99.306	Mesocricetus_auratus
ENSEEUG00000003871	PUM1	75	97.546	ENSMICG00000012213	-	80	98.305	Microcebus_murinus
ENSEEUG00000003871	PUM1	74	99.661	ENSMICG00000007713	-	80	100.000	Microcebus_murinus
ENSEEUG00000003871	PUM1	74	99.322	ENSMOCG00000015463	Pum1	80	98.611	Microtus_ochrogaster
ENSEEUG00000003871	PUM1	58	88.046	ENSMMOG00000019817	pum1	74	90.602	Mola_mola
ENSEEUG00000003871	PUM1	74	98.667	ENSMODG00000017067	PUM1	76	98.667	Monodelphis_domestica
ENSEEUG00000003871	PUM1	62	88.276	ENSMALG00000016399	pum1	76	90.843	Monopterus_albus
ENSEEUG00000003871	PUM1	74	99.322	MGP_CAROLIEiJ_G0026549	Pum1	80	98.611	Mus_caroli
ENSEEUG00000003871	PUM1	74	99.661	ENSMUSG00000028580	Pum1	80	99.306	Mus_musculus
ENSEEUG00000003871	PUM1	74	99.322	MGP_PahariEiJ_G0028881	Pum1	80	99.306	Mus_pahari
ENSEEUG00000003871	PUM1	74	99.661	MGP_SPRETEiJ_G0027529	Pum1	80	99.306	Mus_spretus
ENSEEUG00000003871	PUM1	74	100.000	ENSMPUG00000015454	PUM1	76	100.000	Mustela_putorius_furo
ENSEEUG00000003871	PUM1	74	99.661	ENSMLUG00000006490	PUM1	76	99.661	Myotis_lucifugus
ENSEEUG00000003871	PUM1	74	100.000	ENSNGAG00000002378	Pum1	80	100.000	Nannospalax_galili
ENSEEUG00000003871	PUM1	62	90.222	ENSNBRG00000010689	pum1	79	89.778	Neolamprologus_brichardi
ENSEEUG00000003871	PUM1	76	100.000	ENSNLEG00000001151	PUM1	80	100.000	Nomascus_leucogenys
ENSEEUG00000003871	PUM1	65	100.000	ENSMEUG00000000976	-	66	97.297	Notamacropus_eugenii
ENSEEUG00000003871	PUM1	71	99.664	ENSOPRG00000001776	PUM1	66	99.664	Ochotona_princeps
ENSEEUG00000003871	PUM1	74	99.383	ENSODEG00000003465	PUM1	80	99.383	Octodon_degus
ENSEEUG00000003871	PUM1	75	90.066	ENSONIG00000002290	pum1	76	90.444	Oreochromis_niloticus
ENSEEUG00000003871	PUM1	55	91.304	ENSOANG00000004902	-	69	90.598	Ornithorhynchus_anatinus
ENSEEUG00000003871	PUM1	74	99.387	ENSOCUG00000008641	PUM1	76	99.387	Oryctolagus_cuniculus
ENSEEUG00000003871	PUM1	74	92.444	ENSORLG00000011482	pum1	76	90.222	Oryzias_latipes
ENSEEUG00000003871	PUM1	74	92.444	ENSORLG00020019461	pum1	76	90.222	Oryzias_latipes_hni
ENSEEUG00000003871	PUM1	74	92.444	ENSORLG00015011375	pum1	76	90.222	Oryzias_latipes_hsok
ENSEEUG00000003871	PUM1	62	89.425	ENSOMEG00000009312	pum1	78	90.120	Oryzias_melastigma
ENSEEUG00000003871	PUM1	74	99.661	ENSOGAG00000011063	PUM1	76	99.661	Otolemur_garnettii
ENSEEUG00000003871	PUM1	74	100.000	ENSOARG00000001899	PUM1	79	100.000	Ovis_aries
ENSEEUG00000003871	PUM1	75	100.000	ENSPPAG00000044003	PUM1	80	100.000	Pan_paniscus
ENSEEUG00000003871	PUM1	77	100.000	ENSPPRG00000001370	PUM1	80	100.000	Panthera_pardus
ENSEEUG00000003871	PUM1	77	99.778	ENSPTIG00000010798	PUM1	80	100.000	Panthera_tigris_altaica
ENSEEUG00000003871	PUM1	75	100.000	ENSPTRG00000000453	PUM1	80	100.000	Pan_troglodytes
ENSEEUG00000003871	PUM1	74	100.000	ENSPANG00000016338	PUM1	80	100.000	Papio_anubis
ENSEEUG00000003871	PUM1	74	93.333	ENSPKIG00000010578	pum1	78	93.237	Paramormyrops_kingsleyae
ENSEEUG00000003871	PUM1	74	99.111	ENSPSIG00000014118	PUM1	76	99.111	Pelodiscus_sinensis
ENSEEUG00000003871	PUM1	62	90.889	ENSPMGG00000005836	pum1	79	90.444	Periophthalmus_magnuspinnatus
ENSEEUG00000003871	PUM1	74	99.661	ENSPEMG00000010009	Pum1	80	99.306	Peromyscus_maniculatus_bairdii
ENSEEUG00000003871	PUM1	74	98.667	ENSPCIG00000014151	PUM1	82	98.667	Phascolarctos_cinereus
ENSEEUG00000003871	PUM1	69	90.444	ENSPFOG00000007289	pum1	75	90.000	Poecilia_formosa
ENSEEUG00000003871	PUM1	74	90.444	ENSPLAG00000007256	pum1	77	90.000	Poecilia_latipinna
ENSEEUG00000003871	PUM1	64	90.444	ENSPMEG00000019543	pum1	73	90.000	Poecilia_mexicana
ENSEEUG00000003871	PUM1	74	90.444	ENSPREG00000005195	pum1	79	89.556	Poecilia_reticulata
ENSEEUG00000003871	PUM1	74	100.000	ENSPPYG00000001621	PUM1	75	100.000	Pongo_abelii
ENSEEUG00000003871	PUM1	59	100.000	ENSPCAG00000001979	PUM1	57	100.000	Procavia_capensis
ENSEEUG00000003871	PUM1	74	99.661	ENSPCOG00000004398	PUM1	80	100.000	Propithecus_coquereli
ENSEEUG00000003871	PUM1	75	100.000	ENSPVAG00000005207	PUM1	74	100.000	Pteropus_vampyrus
ENSEEUG00000003871	PUM1	74	90.667	ENSPNYG00000009518	pum1	76	90.222	Pundamilia_nyererei
ENSEEUG00000003871	PUM1	74	92.889	ENSPNAG00000026728	pum1	77	92.889	Pygocentrus_nattereri
ENSEEUG00000003871	PUM1	74	99.322	ENSRNOG00000011709	Pum1	76	99.322	Rattus_norvegicus
ENSEEUG00000003871	PUM1	77	100.000	ENSRBIG00000042521	PUM1	80	100.000	Rhinopithecus_bieti
ENSEEUG00000003871	PUM1	75	100.000	ENSRROG00000020156	PUM1	80	100.000	Rhinopithecus_roxellana
ENSEEUG00000003871	PUM1	75	100.000	ENSSBOG00000032037	PUM1	80	100.000	Saimiri_boliviensis_boliviensis
ENSEEUG00000003871	PUM1	74	98.667	ENSSHAG00000010918	PUM1	76	98.667	Sarcophilus_harrisii
ENSEEUG00000003871	PUM1	74	91.111	ENSSMAG00000010918	pum1	76	90.843	Scophthalmus_maximus
ENSEEUG00000003871	PUM1	74	91.111	ENSSDUG00000009021	pum1	76	90.667	Seriola_dumerili
ENSEEUG00000003871	PUM1	70	91.111	ENSSLDG00000009667	pum1	74	90.667	Seriola_lalandi_dorsalis
ENSEEUG00000003871	PUM1	70	99.556	ENSSARG00000003055	PUM1	70	99.556	Sorex_araneus
ENSEEUG00000003871	PUM1	74	99.333	ENSSPUG00000006267	PUM1	76	99.333	Sphenodon_punctatus
ENSEEUG00000003871	PUM1	74	91.111	ENSSPAG00000016636	pum1	76	90.843	Stegastes_partitus
ENSEEUG00000003871	PUM1	74	100.000	ENSSSCG00000003591	PUM1	82	100.000	Sus_scrofa
ENSEEUG00000003871	PUM1	74	91.111	ENSTRUG00000013121	pum1	79	90.222	Takifugu_rubripes
ENSEEUG00000003871	PUM1	75	90.909	ENSTNIG00000016983	pum1	76	90.466	Tetraodon_nigroviridis
ENSEEUG00000003871	PUM1	62	98.993	ENSTBEG00000013810	PUM1	65	98.993	Tupaia_belangeri
ENSEEUG00000003871	PUM1	67	100.000	ENSTTRG00000007436	PUM1	67	100.000	Tursiops_truncatus
ENSEEUG00000003871	PUM1	73	100.000	ENSUAMG00000018262	-	74	100.000	Ursus_americanus
ENSEEUG00000003871	PUM1	71	100.000	ENSUMAG00000009211	PUM1	79	100.000	Ursus_maritimus
ENSEEUG00000003871	PUM1	75	100.000	ENSVPAG00000005902	PUM1	76	100.000	Vicugna_pacos
ENSEEUG00000003871	PUM1	74	99.778	ENSVVUG00000014631	PUM1	79	99.758	Vulpes_vulpes
ENSEEUG00000003871	PUM1	75	92.025	ENSXETG00000012904	pum1	76	92.025	Xenopus_tropicalis
ENSEEUG00000003871	PUM1	74	90.444	ENSXMAG00000002945	pum1	76	90.000	Xiphophorus_maculatus