EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000003893 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 36805 bases
Position: chrGeneScaffold_1409:1211-38015
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000003596	Ribonuclease_3	PF00636.26	1.8e-25	1	1
ENSEEUP00000003596	PAZ	PF02170.22	6.8e-10	1	1
ENSEEUP00000003596	ResIII	PF04851.15	9.9e-11	1	1
ENSEEUP00000003596	DEAD	PF00270.29	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000003951	-	5598	-	ENSEEUP00000003596	1865 (aa)	-	UPI0000F627C7

Gene Model

Click here to download ENSEEUG00000003893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000003893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000003893	-	55	97.761	ENSG00000100697	DICER1	90	96.825	Homo_sapiens
ENSEEUG00000003893	-	55	95.652	ENSAPOG00000020381	dicer1	56	95.652	Acanthochromis_polyacanthus
ENSEEUG00000003893	-	55	97.761	ENSAMEG00000006447	DICER1	56	97.761	Ailuropoda_melanoleuca
ENSEEUG00000003893	-	55	95.652	ENSAOCG00000023381	dicer1	56	95.652	Amphiprion_ocellaris
ENSEEUG00000003893	-	55	95.652	ENSAPEG00000022809	dicer1	56	95.652	Amphiprion_percula
ENSEEUG00000003893	-	55	95.652	ENSATEG00000014048	dicer1	56	95.652	Anabas_testudineus
ENSEEUG00000003893	-	55	97.037	ENSAPLG00000012407	DICER1	56	97.037	Anas_platyrhynchos
ENSEEUG00000003893	-	55	97.015	ENSACAG00000013033	DICER1	56	97.015	Anolis_carolinensis
ENSEEUG00000003893	-	55	97.761	ENSANAG00000023622	DICER1	56	97.761	Aotus_nancymaae
ENSEEUG00000003893	-	55	95.652	ENSACLG00000007920	dicer1	56	95.652	Astatotilapia_calliptera
ENSEEUG00000003893	-	55	95.522	ENSAMXG00000010730	dicer1	56	95.522	Astyanax_mexicanus
ENSEEUG00000003893	-	55	97.761	ENSBTAG00000012852	DICER1	56	97.761	Bos_taurus
ENSEEUG00000003893	-	55	97.761	ENSCJAG00000006225	DICER1	56	97.761	Callithrix_jacchus
ENSEEUG00000003893	-	55	97.761	ENSCAFG00000017701	DICER1	56	97.761	Canis_familiaris
ENSEEUG00000003893	-	55	97.761	ENSCAFG00020014247	DICER1	56	97.761	Canis_lupus_dingo
ENSEEUG00000003893	-	55	97.761	ENSCHIG00000015885	DICER1	56	97.761	Capra_hircus
ENSEEUG00000003893	-	55	94.030	ENSTSYG00000002044	DICER1	58	95.455	Carlito_syrichta
ENSEEUG00000003893	-	55	97.761	ENSCPOG00000004221	DICER1	56	97.761	Cavia_porcellus
ENSEEUG00000003893	-	55	97.761	ENSCCAG00000027063	DICER1	56	97.761	Cebus_capucinus
ENSEEUG00000003893	-	55	97.761	ENSCATG00000031403	DICER1	56	97.761	Cercocebus_atys
ENSEEUG00000003893	-	55	98.462	ENSCLAG00000015000	DICER1	55	98.462	Chinchilla_lanigera
ENSEEUG00000003893	-	55	97.761	ENSCSAG00000010696	DICER1	56	97.761	Chlorocebus_sabaeus
ENSEEUG00000003893	-	55	97.015	ENSCPBG00000009859	DICER1	58	97.015	Chrysemys_picta_bellii
ENSEEUG00000003893	-	55	97.761	ENSCANG00000031429	DICER1	56	97.761	Colobus_angolensis_palliatus
ENSEEUG00000003893	-	55	98.507	ENSCGRG00001008088	Dicer1	56	98.507	Cricetulus_griseus_chok1gshd
ENSEEUG00000003893	-	55	98.507	ENSCGRG00000012281	Dicer1	56	98.507	Cricetulus_griseus_crigri
ENSEEUG00000003893	-	54	95.420	ENSCSEG00000017078	dicer1	56	95.420	Cynoglossus_semilaevis
ENSEEUG00000003893	-	54	96.947	ENSCVAG00000020035	dicer1	57	96.947	Cyprinodon_variegatus
ENSEEUG00000003893	-	55	96.269	ENSDARG00000001129	dicer1	55	96.269	Danio_rerio
ENSEEUG00000003893	-	54	97.761	ENSDNOG00000004190	DICER1	56	97.761	Dasypus_novemcinctus
ENSEEUG00000003893	-	55	96.269	ENSDORG00000006215	Dicer1	56	96.269	Dipodomys_ordii
ENSEEUG00000003893	-	52	95.522	ENSETEG00000011000	DICER1	57	95.522	Echinops_telfairi
ENSEEUG00000003893	-	55	97.761	ENSEASG00005021485	DICER1	56	97.761	Equus_asinus_asinus
ENSEEUG00000003893	-	55	98.473	ENSECAG00000006079	DICER1	57	97.761	Equus_caballus
ENSEEUG00000003893	-	53	95.652	ENSELUG00000024317	dicer1	53	95.652	Esox_lucius
ENSEEUG00000003893	-	55	97.761	ENSFCAG00000003535	DICER1	56	97.761	Felis_catus
ENSEEUG00000003893	-	55	97.761	ENSFALG00000002516	DICER1	56	97.761	Ficedula_albicollis
ENSEEUG00000003893	-	55	97.761	ENSFDAG00000021287	DICER1	57	97.761	Fukomys_damarensis
ENSEEUG00000003893	-	50	100.000	ENSFHEG00000016839	dicer1	53	100.000	Fundulus_heteroclitus
ENSEEUG00000003893	-	53	95.652	ENSGMOG00000006057	dicer1	57	95.652	Gadus_morhua
ENSEEUG00000003893	-	55	97.761	ENSGALG00000010999	DICER1	56	97.761	Gallus_gallus
ENSEEUG00000003893	-	54	97.710	ENSGAFG00000010728	dicer1	57	97.710	Gambusia_affinis
ENSEEUG00000003893	-	54	97.710	ENSGACG00000020134	dicer1	57	97.710	Gasterosteus_aculeatus
ENSEEUG00000003893	-	55	97.761	ENSGGOG00000003760	DICER1	56	97.761	Gorilla_gorilla
ENSEEUG00000003893	-	55	95.652	ENSHBUG00000018941	dicer1	56	95.652	Haplochromis_burtoni
ENSEEUG00000003893	-	55	97.761	ENSHGLG00000018124	DICER1	56	97.761	Heterocephalus_glaber_female
ENSEEUG00000003893	-	55	97.761	ENSHGLG00100010985	DICER1	56	97.761	Heterocephalus_glaber_male
ENSEEUG00000003893	-	55	96.269	ENSHCOG00000015738	dicer1	57	96.269	Hippocampus_comes
ENSEEUG00000003893	-	55	96.269	ENSIPUG00000005080	dicer1	56	96.269	Ictalurus_punctatus
ENSEEUG00000003893	-	55	97.761	ENSSTOG00000022439	DICER1	56	97.761	Ictidomys_tridecemlineatus
ENSEEUG00000003893	-	55	97.761	ENSJJAG00000010766	Dicer1	56	97.761	Jaculus_jaculus
ENSEEUG00000003893	-	51	95.652	ENSKMAG00000001429	dicer1	68	95.522	Kryptolebias_marmoratus
ENSEEUG00000003893	-	55	95.652	ENSLBEG00000008928	dicer1	56	95.652	Labrus_bergylta
ENSEEUG00000003893	-	55	95.652	ENSLACG00000008302	DICER1	56	95.652	Latimeria_chalumnae
ENSEEUG00000003893	-	55	97.015	ENSLOCG00000008544	dicer1	55	97.015	Lepisosteus_oculatus
ENSEEUG00000003893	-	55	97.761	ENSLAFG00000013632	DICER1	56	97.761	Loxodonta_africana
ENSEEUG00000003893	-	55	97.761	ENSMFAG00000002987	DICER1	56	97.761	Macaca_fascicularis
ENSEEUG00000003893	-	55	97.761	ENSMMUG00000023305	DICER1	56	97.761	Macaca_mulatta
ENSEEUG00000003893	-	55	97.761	ENSMNEG00000021073	DICER1	56	97.761	Macaca_nemestrina
ENSEEUG00000003893	-	55	97.761	ENSMLEG00000034800	DICER1	56	97.761	Mandrillus_leucophaeus
ENSEEUG00000003893	-	55	96.269	ENSMAMG00000016806	dicer1	56	96.269	Mastacembelus_armatus
ENSEEUG00000003893	-	55	95.652	ENSMZEG00005016989	dicer1	56	95.652	Maylandia_zebra
ENSEEUG00000003893	-	55	97.761	ENSMGAG00000013207	DICER1	56	97.761	Meleagris_gallopavo
ENSEEUG00000003893	-	55	98.507	ENSMAUG00000009936	Dicer1	56	98.507	Mesocricetus_auratus
ENSEEUG00000003893	-	55	97.761	ENSMICG00000011690	DICER1	56	97.761	Microcebus_murinus
ENSEEUG00000003893	-	55	98.507	ENSMOCG00000018636	Dicer1	56	98.507	Microtus_ochrogaster
ENSEEUG00000003893	-	55	96.269	ENSMMOG00000018531	dicer1	56	96.269	Mola_mola
ENSEEUG00000003893	-	55	97.761	ENSMODG00000012624	DICER1	56	97.761	Monodelphis_domestica
ENSEEUG00000003893	-	55	95.652	ENSMALG00000009445	dicer1	56	95.652	Monopterus_albus
ENSEEUG00000003893	-	55	98.507	ENSMUSG00000041415	Dicer1	56	98.507	Mus_musculus
ENSEEUG00000003893	-	55	97.761	ENSMPUG00000003130	DICER1	56	97.761	Mustela_putorius_furo
ENSEEUG00000003893	-	55	97.761	ENSMLUG00000003991	DICER1	56	97.761	Myotis_lucifugus
ENSEEUG00000003893	-	55	98.507	ENSNGAG00000010103	Dicer1	56	98.507	Nannospalax_galili
ENSEEUG00000003893	-	53	95.652	ENSNBRG00000022306	dicer1	54	95.652	Neolamprologus_brichardi
ENSEEUG00000003893	-	55	97.761	ENSNLEG00000017309	DICER1	56	97.761	Nomascus_leucogenys
ENSEEUG00000003893	-	55	97.015	ENSODEG00000008594	DICER1	56	97.015	Octodon_degus
ENSEEUG00000003893	-	55	95.652	ENSONIG00000010424	dicer1	57	95.652	Oreochromis_niloticus
ENSEEUG00000003893	-	55	97.761	ENSOANG00000012034	DICER1	56	97.761	Ornithorhynchus_anatinus
ENSEEUG00000003893	-	55	98.507	ENSOCUG00000010849	DICER1	56	98.507	Oryctolagus_cuniculus
ENSEEUG00000003893	-	55	96.269	ENSORLG00000011022	dicer1	57	96.269	Oryzias_latipes
ENSEEUG00000003893	-	55	96.269	ENSORLG00020021795	dicer1	57	96.269	Oryzias_latipes_hni
ENSEEUG00000003893	-	55	96.269	ENSORLG00015019667	dicer1	57	96.269	Oryzias_latipes_hsok
ENSEEUG00000003893	-	55	96.269	ENSOMEG00000018679	dicer1	57	96.269	Oryzias_melastigma
ENSEEUG00000003893	-	55	97.761	ENSOARG00000015465	DICER1	56	97.761	Ovis_aries
ENSEEUG00000003893	-	55	97.761	ENSPPAG00000035143	DICER1	56	97.761	Pan_paniscus
ENSEEUG00000003893	-	55	97.761	ENSPPRG00000001322	DICER1	56	97.761	Panthera_pardus
ENSEEUG00000003893	-	55	97.761	ENSPTIG00000008215	DICER1	56	97.761	Panthera_tigris_altaica
ENSEEUG00000003893	-	55	97.761	ENSPTRG00000023484	DICER1	56	97.761	Pan_troglodytes
ENSEEUG00000003893	-	55	97.761	ENSPANG00000023078	DICER1	56	97.761	Papio_anubis
ENSEEUG00000003893	-	55	95.652	ENSPKIG00000019962	dicer1	60	95.652	Paramormyrops_kingsleyae
ENSEEUG00000003893	-	55	95.652	ENSPSIG00000010801	DICER1	56	95.652	Pelodiscus_sinensis
ENSEEUG00000003893	-	55	95.652	ENSPMGG00000010210	dicer1	57	95.652	Periophthalmus_magnuspinnatus
ENSEEUG00000003893	-	55	98.507	ENSPEMG00000014125	Dicer1	56	98.507	Peromyscus_maniculatus_bairdii
ENSEEUG00000003893	-	55	97.761	ENSPCIG00000018004	DICER1	56	97.761	Phascolarctos_cinereus
ENSEEUG00000003893	-	54	97.710	ENSPFOG00000008531	dicer1	57	97.710	Poecilia_formosa
ENSEEUG00000003893	-	54	96.947	ENSPLAG00000008539	dicer1	57	96.947	Poecilia_latipinna
ENSEEUG00000003893	-	54	97.710	ENSPMEG00000014284	dicer1	57	97.710	Poecilia_mexicana
ENSEEUG00000003893	-	54	97.710	ENSPREG00000012120	dicer1	57	97.710	Poecilia_reticulata
ENSEEUG00000003893	-	55	97.761	ENSPPYG00000006112	DICER1	56	97.761	Pongo_abelii
ENSEEUG00000003893	-	52	96.552	ENSPCAG00000010828	DICER1	54	96.552	Procavia_capensis
ENSEEUG00000003893	-	55	97.761	ENSPCOG00000022909	DICER1	56	97.761	Propithecus_coquereli
ENSEEUG00000003893	-	55	95.652	ENSPNYG00000017939	dicer1	56	95.652	Pundamilia_nyererei
ENSEEUG00000003893	-	55	95.652	ENSPNAG00000001012	dicer1	55	95.652	Pygocentrus_nattereri
ENSEEUG00000003893	-	55	97.761	ENSRNOG00000010711	Dicer1	56	97.761	Rattus_norvegicus
ENSEEUG00000003893	-	55	97.761	ENSRBIG00000020932	DICER1	56	97.761	Rhinopithecus_bieti
ENSEEUG00000003893	-	55	97.761	ENSRROG00000031891	DICER1	56	97.761	Rhinopithecus_roxellana
ENSEEUG00000003893	-	55	97.761	ENSSBOG00000028660	DICER1	56	97.761	Saimiri_boliviensis_boliviensis
ENSEEUG00000003893	-	55	97.761	ENSSHAG00000012077	DICER1	57	97.761	Sarcophilus_harrisii
ENSEEUG00000003893	-	55	95.652	ENSSFOG00015010804	dicer1	60	95.652	Scleropages_formosus
ENSEEUG00000003893	-	55	96.269	ENSSMAG00000015520	dicer1	57	96.269	Scophthalmus_maximus
ENSEEUG00000003893	-	55	95.652	ENSSDUG00000021652	dicer1	56	95.652	Seriola_dumerili
ENSEEUG00000003893	-	51	95.652	ENSSLDG00000012087	dicer1	53	95.652	Seriola_lalandi_dorsalis
ENSEEUG00000003893	-	55	97.761	ENSSPUG00000016222	DICER1	56	97.761	Sphenodon_punctatus
ENSEEUG00000003893	-	55	95.652	ENSSPAG00000017128	dicer1	56	95.652	Stegastes_partitus
ENSEEUG00000003893	-	55	99.231	ENSSSCG00000028225	DICER1	56	99.231	Sus_scrofa
ENSEEUG00000003893	-	55	97.761	ENSTGUG00000012658	DICER1	56	97.761	Taeniopygia_guttata
ENSEEUG00000003893	-	54	96.947	ENSTRUG00000006156	dicer1	57	96.947	Takifugu_rubripes
ENSEEUG00000003893	-	55	97.015	ENSTNIG00000005441	dicer1	57	97.015	Tetraodon_nigroviridis
ENSEEUG00000003893	-	52	97.468	ENSUAMG00000011912	DICER1	55	97.468	Ursus_americanus
ENSEEUG00000003893	-	55	97.761	ENSUMAG00000003027	DICER1	61	97.761	Ursus_maritimus
ENSEEUG00000003893	-	55	96.269	ENSVPAG00000006817	DICER1	56	96.269	Vicugna_pacos
ENSEEUG00000003893	-	55	97.761	ENSVVUG00000018855	DICER1	56	97.761	Vulpes_vulpes
ENSEEUG00000003893	-	55	96.269	ENSXETG00000023315	dicer1	56	96.269	Xenopus_tropicalis
ENSEEUG00000003893	-	54	97.710	ENSXMAG00000015721	dicer1	57	97.710	Xiphophorus_maculatus