EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000004116 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 16797 bases
Position: chrGeneScaffold_8669:52262-69058
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000003799	Anticodon_1	PF08264.13	4.7e-33	1	1
ENSEEUP00000003799	tRNA-synt_1	PF00133.22	3e-119	1	2
ENSEEUP00000003799	tRNA-synt_1	PF00133.22	3e-119	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000004180	VARS-201	3660	-	ENSEEUP00000003799	1219 (aa)	-	UPI0000F62C7A

Gene Model

Click here to download ENSEEUG00000004116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000004116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000004116	VARS	83	93.772	ENSG00000204394	VARS	83	93.772	Homo_sapiens
ENSEEUG00000004116	VARS	72	71.500	ENSAPOG00000020921	vars	70	71.500	Acanthochromis_polyacanthus
ENSEEUG00000004116	VARS	72	71.500	ENSAPOG00000020691	vars	70	71.500	Acanthochromis_polyacanthus
ENSEEUG00000004116	VARS	83	91.349	ENSAMEG00000006417	VARS	83	91.349	Ailuropoda_melanoleuca
ENSEEUG00000004116	VARS	73	71.178	ENSACIG00000013752	vars	72	71.178	Amphilophus_citrinellus
ENSEEUG00000004116	VARS	73	72.180	ENSAOCG00000002447	vars	71	72.180	Amphiprion_ocellaris
ENSEEUG00000004116	VARS	83	71.679	ENSAPEG00000010638	vars	82	71.679	Amphiprion_percula
ENSEEUG00000004116	VARS	73	71.429	ENSATEG00000020219	vars	71	71.429	Anabas_testudineus
ENSEEUG00000004116	VARS	63	73.935	ENSACAG00000029133	-	68	73.935	Anolis_carolinensis
ENSEEUG00000004116	VARS	83	92.734	ENSANAG00000015453	VARS	83	92.734	Aotus_nancymaae
ENSEEUG00000004116	VARS	73	71.178	ENSACLG00000025699	vars	69	71.178	Astatotilapia_calliptera
ENSEEUG00000004116	VARS	67	71.930	ENSAMXG00000017716	vars	66	71.930	Astyanax_mexicanus
ENSEEUG00000004116	VARS	83	92.388	ENSBTAG00000005631	VARS	83	92.388	Bos_taurus
ENSEEUG00000004116	VARS	83	92.042	ENSCJAG00000002604	VARS	83	92.042	Callithrix_jacchus
ENSEEUG00000004116	VARS	83	92.042	ENSCAFG00000000636	VARS	83	92.042	Canis_familiaris
ENSEEUG00000004116	VARS	76	93.780	ENSCAFG00020020790	VARS	79	93.780	Canis_lupus_dingo
ENSEEUG00000004116	VARS	83	92.042	ENSCHIG00000011008	VARS	84	92.042	Capra_hircus
ENSEEUG00000004116	VARS	83	91.696	ENSTSYG00000001567	VARS	83	91.696	Carlito_syrichta
ENSEEUG00000004116	VARS	74	87.981	ENSCAPG00000013736	VARS	79	86.617	Cavia_aperea
ENSEEUG00000004116	VARS	83	87.543	ENSCPOG00000000870	VARS	85	87.543	Cavia_porcellus
ENSEEUG00000004116	VARS	83	92.388	ENSCCAG00000035656	VARS	83	92.388	Cebus_capucinus
ENSEEUG00000004116	VARS	83	92.388	ENSCATG00000022394	VARS	83	92.388	Cercocebus_atys
ENSEEUG00000004116	VARS	72	87.019	ENSCLAG00000009470	VARS	73	87.019	Chinchilla_lanigera
ENSEEUG00000004116	VARS	83	93.080	ENSCSAG00000008784	VARS	83	93.080	Chlorocebus_sabaeus
ENSEEUG00000004116	VARS	63	85.526	ENSCPBG00000007943	VARS	75	85.526	Chrysemys_picta_bellii
ENSEEUG00000004116	VARS	83	92.734	ENSCANG00000033570	VARS	83	92.734	Colobus_angolensis_palliatus
ENSEEUG00000004116	VARS	80	90.657	ENSCGRG00001005686	Vars	78	90.657	Cricetulus_griseus_chok1gshd
ENSEEUG00000004116	VARS	74	90.657	ENSCGRG00000013352	Vars	62	90.657	Cricetulus_griseus_crigri
ENSEEUG00000004116	VARS	73	70.426	ENSCSEG00000019652	vars	71	70.426	Cynoglossus_semilaevis
ENSEEUG00000004116	VARS	73	71.429	ENSCVAG00000022398	vars	72	71.429	Cyprinodon_variegatus
ENSEEUG00000004116	VARS	72	71.178	ENSDARG00000044575	vars	72	71.178	Danio_rerio
ENSEEUG00000004116	VARS	70	89.273	ENSDORG00000016433	Vars	76	89.273	Dipodomys_ordii
ENSEEUG00000004116	VARS	56	82.237	ENSETEG00000003824	VARS	60	82.237	Echinops_telfairi
ENSEEUG00000004116	VARS	83	92.042	ENSEASG00005015673	VARS	83	92.042	Equus_asinus_asinus
ENSEEUG00000004116	VARS	83	91.349	ENSECAG00000014620	VARS	83	91.349	Equus_caballus
ENSEEUG00000004116	VARS	73	70.426	ENSELUG00000006550	vars	70	70.426	Esox_lucius
ENSEEUG00000004116	VARS	83	89.965	ENSFCAG00000004510	VARS	83	89.965	Felis_catus
ENSEEUG00000004116	VARS	62	88.221	ENSFDAG00000011401	VARS	74	88.221	Fukomys_damarensis
ENSEEUG00000004116	VARS	72	71.930	ENSFHEG00000010672	vars	72	71.930	Fundulus_heteroclitus
ENSEEUG00000004116	VARS	73	69.925	ENSGMOG00000014908	vars	75	69.925	Gadus_morhua
ENSEEUG00000004116	VARS	73	71.429	ENSGAFG00000021630	vars	72	71.429	Gambusia_affinis
ENSEEUG00000004116	VARS	73	70.927	ENSGACG00000009601	vars	75	70.927	Gasterosteus_aculeatus
ENSEEUG00000004116	VARS	83	93.426	ENSGGOG00000011364	VARS	83	93.426	Gorilla_gorilla
ENSEEUG00000004116	VARS	73	71.178	ENSHBUG00000017151	vars	69	71.178	Haplochromis_burtoni
ENSEEUG00000004116	VARS	80	84.775	ENSHGLG00000011646	VARS	81	84.712	Heterocephalus_glaber_female
ENSEEUG00000004116	VARS	67	91.589	ENSHGLG00100018062	VARS	73	91.589	Heterocephalus_glaber_male
ENSEEUG00000004116	VARS	73	69.925	ENSHCOG00000012198	vars	72	69.925	Hippocampus_comes
ENSEEUG00000004116	VARS	73	72.431	ENSIPUG00000005218	vars	72	72.431	Ictalurus_punctatus
ENSEEUG00000004116	VARS	80	92.042	ENSSTOG00000013112	VARS	83	92.042	Ictidomys_tridecemlineatus
ENSEEUG00000004116	VARS	83	85.965	ENSJJAG00000019749	-	83	85.965	Jaculus_jaculus
ENSEEUG00000004116	VARS	81	72.318	ENSJJAG00000015343	-	74	73.846	Jaculus_jaculus
ENSEEUG00000004116	VARS	73	70.426	ENSKMAG00000009455	vars	71	70.426	Kryptolebias_marmoratus
ENSEEUG00000004116	VARS	72	71.930	ENSLBEG00000010341	vars	72	71.679	Labrus_bergylta
ENSEEUG00000004116	VARS	66	64.706	ENSLACG00000015232	VARS	68	64.706	Latimeria_chalumnae
ENSEEUG00000004116	VARS	73	71.178	ENSLOCG00000004240	vars	72	71.178	Lepisosteus_oculatus
ENSEEUG00000004116	VARS	83	89.619	ENSLAFG00000023090	VARS	83	89.619	Loxodonta_africana
ENSEEUG00000004116	VARS	83	92.734	ENSMFAG00000001032	VARS	83	92.734	Macaca_fascicularis
ENSEEUG00000004116	VARS	83	92.734	ENSMMUG00000006828	VARS	83	92.734	Macaca_mulatta
ENSEEUG00000004116	VARS	83	93.080	ENSMNEG00000042072	VARS	83	93.080	Macaca_nemestrina
ENSEEUG00000004116	VARS	83	93.080	ENSMLEG00000039307	VARS	83	93.080	Mandrillus_leucophaeus
ENSEEUG00000004116	VARS	73	71.429	ENSMAMG00000003949	vars	71	71.429	Mastacembelus_armatus
ENSEEUG00000004116	VARS	73	71.178	ENSMZEG00005018327	vars	70	71.178	Maylandia_zebra
ENSEEUG00000004116	VARS	80	89.619	ENSMAUG00000006715	Vars	78	89.619	Mesocricetus_auratus
ENSEEUG00000004116	VARS	83	90.311	ENSMICG00000003548	VARS	83	90.311	Microcebus_murinus
ENSEEUG00000004116	VARS	83	90.657	ENSMOCG00000015404	Vars	83	90.657	Microtus_ochrogaster
ENSEEUG00000004116	VARS	73	70.927	ENSMMOG00000015801	vars	71	70.927	Mola_mola
ENSEEUG00000004116	VARS	80	85.577	ENSMODG00000015204	-	78	85.577	Monodelphis_domestica
ENSEEUG00000004116	VARS	73	71.679	ENSMALG00000022532	vars	72	71.429	Monopterus_albus
ENSEEUG00000004116	VARS	80	92.042	MGP_CAROLIEiJ_G0021491	Vars	78	92.042	Mus_caroli
ENSEEUG00000004116	VARS	80	91.696	ENSMUSG00000007029	Vars	78	91.696	Mus_musculus
ENSEEUG00000004116	VARS	80	91.638	MGP_PahariEiJ_G0020486	Vars	78	91.638	Mus_pahari
ENSEEUG00000004116	VARS	80	91.696	MGP_SPRETEiJ_G0022396	Vars	78	91.696	Mus_spretus
ENSEEUG00000004116	VARS	83	92.042	ENSMPUG00000010821	VARS	83	92.042	Mustela_putorius_furo
ENSEEUG00000004116	VARS	59	87.469	ENSMLUG00000013126	VARS	70	89.474	Myotis_lucifugus
ENSEEUG00000004116	VARS	80	89.619	ENSNGAG00000012151	Vars	78	89.619	Nannospalax_galili
ENSEEUG00000004116	VARS	73	71.178	ENSNBRG00000020520	vars	72	71.178	Neolamprologus_brichardi
ENSEEUG00000004116	VARS	83	92.734	ENSNLEG00000006351	VARS	83	92.734	Nomascus_leucogenys
ENSEEUG00000004116	VARS	80	80.201	ENSMEUG00000011378	VARS	78	80.201	Notamacropus_eugenii
ENSEEUG00000004116	VARS	83	87.970	ENSOPRG00000003607	VARS	83	87.970	Ochotona_princeps
ENSEEUG00000004116	VARS	80	88.235	ENSODEG00000017681	VARS	78	88.235	Octodon_degus
ENSEEUG00000004116	VARS	73	71.178	ENSONIG00000013064	vars	80	71.178	Oreochromis_niloticus
ENSEEUG00000004116	VARS	62	78.283	ENSOANG00000005400	VARS	85	77.179	Ornithorhynchus_anatinus
ENSEEUG00000004116	VARS	80	89.619	ENSOCUG00000022463	VARS	83	89.619	Oryctolagus_cuniculus
ENSEEUG00000004116	VARS	73	71.429	ENSORLG00000013063	vars	72	71.429	Oryzias_latipes
ENSEEUG00000004116	VARS	73	71.679	ENSORLG00020003504	vars	72	71.679	Oryzias_latipes_hni
ENSEEUG00000004116	VARS	73	71.679	ENSORLG00015009001	vars	72	71.679	Oryzias_latipes_hsok
ENSEEUG00000004116	VARS	73	71.178	ENSOMEG00000015016	vars	72	71.178	Oryzias_melastigma
ENSEEUG00000004116	VARS	80	90.972	ENSOGAG00000007515	VARS	78	90.972	Otolemur_garnettii
ENSEEUG00000004116	VARS	83	93.772	ENSPPAG00000034012	VARS	83	93.772	Pan_paniscus
ENSEEUG00000004116	VARS	83	91.003	ENSPPRG00000014855	VARS	83	91.003	Panthera_pardus
ENSEEUG00000004116	VARS	65	93.269	ENSPTIG00000010462	VARS	71	93.269	Panthera_tigris_altaica
ENSEEUG00000004116	VARS	83	94.118	ENSPTRG00000017985	VARS	83	94.118	Pan_troglodytes
ENSEEUG00000004116	VARS	83	93.080	ENSPANG00000014565	VARS	83	93.080	Papio_anubis
ENSEEUG00000004116	VARS	83	69.000	ENSPKIG00000016304	vars	83	69.000	Paramormyrops_kingsleyae
ENSEEUG00000004116	VARS	73	70.927	ENSPMGG00000023909	vars	71	70.927	Periophthalmus_magnuspinnatus
ENSEEUG00000004116	VARS	80	91.349	ENSPEMG00000006639	Vars	78	91.349	Peromyscus_maniculatus_bairdii
ENSEEUG00000004116	VARS	80	85.096	ENSPCIG00000018553	VARS	78	85.096	Phascolarctos_cinereus
ENSEEUG00000004116	VARS	73	71.429	ENSPFOG00000015690	vars	72	71.429	Poecilia_formosa
ENSEEUG00000004116	VARS	83	70.927	ENSPLAG00000009590	vars	83	70.927	Poecilia_latipinna
ENSEEUG00000004116	VARS	73	71.429	ENSPMEG00000004708	vars	72	71.429	Poecilia_mexicana
ENSEEUG00000004116	VARS	73	71.930	ENSPREG00000013264	vars	71	71.930	Poecilia_reticulata
ENSEEUG00000004116	VARS	83	87.970	ENSPPYG00000016460	VARS	83	87.970	Pongo_abelii
ENSEEUG00000004116	VARS	66	93.421	ENSPCAG00000013565	VARS	67	93.421	Procavia_capensis
ENSEEUG00000004116	VARS	83	93.080	ENSPCOG00000010942	VARS	83	93.080	Propithecus_coquereli
ENSEEUG00000004116	VARS	83	90.311	ENSPVAG00000012403	VARS	83	90.311	Pteropus_vampyrus
ENSEEUG00000004116	VARS	73	71.178	ENSPNYG00000022511	vars	72	71.178	Pundamilia_nyererei
ENSEEUG00000004116	VARS	73	70.927	ENSPNAG00000020962	vars	72	70.927	Pygocentrus_nattereri
ENSEEUG00000004116	VARS	80	91.349	ENSRNOG00000000867	Vars	78	91.349	Rattus_norvegicus
ENSEEUG00000004116	VARS	83	93.080	ENSRBIG00000041669	VARS	83	93.080	Rhinopithecus_bieti
ENSEEUG00000004116	VARS	83	93.080	ENSRROG00000045490	VARS	83	93.080	Rhinopithecus_roxellana
ENSEEUG00000004116	VARS	83	92.388	ENSSBOG00000035402	VARS	83	92.388	Saimiri_boliviensis_boliviensis
ENSEEUG00000004116	VARS	78	85.096	ENSSHAG00000006937	VARS	76	85.096	Sarcophilus_harrisii
ENSEEUG00000004116	VARS	73	70.426	ENSSFOG00015014272	vars	69	85.897	Scleropages_formosus
ENSEEUG00000004116	VARS	73	70.175	ENSSMAG00000009596	vars	71	70.175	Scophthalmus_maximus
ENSEEUG00000004116	VARS	73	71.429	ENSSDUG00000014177	vars	72	71.429	Seriola_dumerili
ENSEEUG00000004116	VARS	73	71.679	ENSSLDG00000025316	vars	72	71.679	Seriola_lalandi_dorsalis
ENSEEUG00000004116	VARS	73	71.930	ENSSPAG00000017068	vars	72	71.679	Stegastes_partitus
ENSEEUG00000004116	VARS	83	91.003	ENSSSCG00000038950	VARS	83	91.003	Sus_scrofa
ENSEEUG00000004116	VARS	54	64.912	ENSTRUG00000012307	vars	62	65.509	Takifugu_rubripes
ENSEEUG00000004116	VARS	73	70.426	ENSTNIG00000008011	vars	75	70.426	Tetraodon_nigroviridis
ENSEEUG00000004116	VARS	76	90.657	ENSTTRG00000014128	VARS	79	90.657	Tursiops_truncatus
ENSEEUG00000004116	VARS	83	91.696	ENSUAMG00000010424	VARS	83	91.696	Ursus_americanus
ENSEEUG00000004116	VARS	73	97.030	ENSUMAG00000013486	VARS	78	97.030	Ursus_maritimus
ENSEEUG00000004116	VARS	83	91.696	ENSVVUG00000021323	VARS	86	91.696	Vulpes_vulpes
ENSEEUG00000004116	VARS	73	69.424	ENSXETG00000024076	vars	71	69.424	Xenopus_tropicalis
ENSEEUG00000004116	VARS	83	71.178	ENSXCOG00000019172	vars	72	71.178	Xiphophorus_couchianus
ENSEEUG00000004116	VARS	73	71.930	ENSXMAG00000010927	vars	72	71.930	Xiphophorus_maculatus