EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000004301 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HNRPDL|JKTBP|laAUF1
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 3389 bases
Position: chrscaffold_370350:79785-83173
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000003913	RRM_1	PF00076.22	4.1e-32	1	2
ENSEEUP00000003913	RRM_1	PF00076.22	4.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000004305	-	1254	-	ENSEEUP00000003913	417 (aa)	-	UPI0000F6321B

Gene Model

Click here to download ENSEEUG00000004301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000004301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000004301	-	65	48.031	ENSEEUG00000013226	HNRNPAB	98	50.000
ENSEEUG00000004301	-	50	37.288	ENSEEUG00000007810	MSI2	53	37.692
ENSEEUG00000004301	-	69	52.769	ENSEEUG00000007552	HNRNPD	82	53.226

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000004301	-	100	93.112	ENSG00000152795	HNRNPDL	100	98.675	Homo_sapiens
ENSEEUG00000004301	-	100	84.561	ENSAMEG00000005145	-	100	84.323	Ailuropoda_melanoleuca
ENSEEUG00000004301	-	72	76.645	ENSAMEG00000007660	-	100	74.671	Ailuropoda_melanoleuca
ENSEEUG00000004301	-	67	94.318	ENSAPLG00000011774	HNRNPDL	99	94.318	Anas_platyrhynchos
ENSEEUG00000004301	-	70	92.440	ENSACAG00000010416	HNRNPDL	92	92.440	Anolis_carolinensis
ENSEEUG00000004301	-	77	94.907	ENSANAG00000030316	-	83	94.907	Aotus_nancymaae
ENSEEUG00000004301	-	67	77.733	ENSANAG00000035255	-	99	76.923	Aotus_nancymaae
ENSEEUG00000004301	-	63	95.455	ENSANAG00000035355	-	100	85.762	Aotus_nancymaae
ENSEEUG00000004301	-	100	92.874	ENSANAG00000029054	HNRNPDL	95	100.000	Aotus_nancymaae
ENSEEUG00000004301	-	72	90.759	ENSANAG00000038001	-	100	90.099	Aotus_nancymaae
ENSEEUG00000004301	-	70	72.542	ENSAMXG00000001495	hnrnpdl	96	75.000	Astyanax_mexicanus
ENSEEUG00000004301	-	100	93.112	ENSBTAG00000014804	HNRNPDL	100	93.112	Bos_taurus
ENSEEUG00000004301	-	100	93.349	ENSCJAG00000015197	-	95	100.000	Callithrix_jacchus
ENSEEUG00000004301	-	59	90.650	ENSCJAG00000045227	-	81	90.351	Callithrix_jacchus
ENSEEUG00000004301	-	100	93.349	ENSCAFG00000008940	HNRNPDL	100	93.349	Canis_familiaris
ENSEEUG00000004301	-	69	82.986	ENSCAFG00000000776	-	100	82.986	Canis_familiaris
ENSEEUG00000004301	-	100	93.349	ENSCAFG00020010699	-	95	100.000	Canis_lupus_dingo
ENSEEUG00000004301	-	94	67.774	ENSCHIG00000026667	-	71	92.308	Capra_hircus
ENSEEUG00000004301	-	100	93.112	ENSCHIG00000010260	-	100	93.112	Capra_hircus
ENSEEUG00000004301	-	69	80.623	ENSTSYG00000036907	-	100	80.623	Carlito_syrichta
ENSEEUG00000004301	-	67	98.162	ENSTSYG00000031074	-	100	98.162	Carlito_syrichta
ENSEEUG00000004301	-	65	82.900	ENSCAPG00000015955	-	100	82.900	Cavia_aperea
ENSEEUG00000004301	-	100	86.417	ENSCPOG00000015619	-	100	86.417	Cavia_porcellus
ENSEEUG00000004301	-	100	92.874	ENSCCAG00000020777	HNRNPDL	95	100.000	Cebus_capucinus
ENSEEUG00000004301	-	100	86.936	ENSCATG00000038573	-	93	100.000	Cercocebus_atys
ENSEEUG00000004301	-	72	74.172	ENSCLAG00000010786	-	100	74.172	Chinchilla_lanigera
ENSEEUG00000004301	-	100	91.469	ENSCLAG00000008428	HNRNPDL	93	100.000	Chinchilla_lanigera
ENSEEUG00000004301	-	100	93.112	ENSCSAG00000004461	HNRNPDL	100	93.112	Chlorocebus_sabaeus
ENSEEUG00000004301	-	81	92.582	ENSCHOG00000010831	-	99	92.492	Choloepus_hoffmanni
ENSEEUG00000004301	-	67	96.324	ENSCHOG00000002938	-	100	96.324	Choloepus_hoffmanni
ENSEEUG00000004301	-	67	95.057	ENSCHOG00000009204	-	100	95.057	Choloepus_hoffmanni
ENSEEUG00000004301	-	81	91.098	ENSCHOG00000003275	-	99	85.886	Choloepus_hoffmanni
ENSEEUG00000004301	-	70	97.603	ENSCHOG00000000160	-	100	97.603	Choloepus_hoffmanni
ENSEEUG00000004301	-	72	92.739	ENSCPBG00000008014	HNRNPDL	100	92.739	Chrysemys_picta_bellii
ENSEEUG00000004301	-	67	99.265	ENSCANG00000020228	-	100	99.265	Colobus_angolensis_palliatus
ENSEEUG00000004301	-	100	89.930	ENSCGRG00001010960	Hnrnpdl	100	90.610	Cricetulus_griseus_chok1gshd
ENSEEUG00000004301	-	67	98.897	ENSCGRG00000011361	-	96	98.897	Cricetulus_griseus_crigri
ENSEEUG00000004301	-	70	72.014	ENSDARG00000003429	hnrnpdl	97	75.168	Danio_rerio
ENSEEUG00000004301	-	53	100.000	ENSDNOG00000033765	-	90	100.000	Dasypus_novemcinctus
ENSEEUG00000004301	-	72	92.977	ENSDNOG00000033760	-	96	92.977	Dasypus_novemcinctus
ENSEEUG00000004301	-	100	92.399	ENSDNOG00000003887	-	100	92.399	Dasypus_novemcinctus
ENSEEUG00000004301	-	74	93.871	ENSDNOG00000018280	-	100	93.871	Dasypus_novemcinctus
ENSEEUG00000004301	-	66	65.108	ENSDNOG00000034016	-	96	64.158	Dasypus_novemcinctus
ENSEEUG00000004301	-	72	89.735	ENSDORG00000024157	-	100	89.735	Dipodomys_ordii
ENSEEUG00000004301	-	100	90.758	ENSDORG00000000968	-	100	92.180	Dipodomys_ordii
ENSEEUG00000004301	-	55	64.378	ENSETEG00000010820	-	100	63.090	Echinops_telfairi
ENSEEUG00000004301	-	77	48.378	ENSEASG00005012961	-	82	57.009	Equus_asinus_asinus
ENSEEUG00000004301	-	100	93.349	ENSEASG00005016276	-	95	100.000	Equus_asinus_asinus
ENSEEUG00000004301	-	100	93.349	ENSECAG00000022692	HNRNPDL	95	100.000	Equus_caballus
ENSEEUG00000004301	-	77	48.624	ENSECAG00000040564	-	84	53.077	Equus_caballus
ENSEEUG00000004301	-	70	76.451	ENSELUG00000003241	hnrnpdl	97	76.451	Esox_lucius
ENSEEUG00000004301	-	100	93.349	ENSFCAG00000000455	HNRNPDL	95	100.000	Felis_catus
ENSEEUG00000004301	-	72	92.053	ENSFALG00000005709	HNRNPDL	100	92.053	Ficedula_albicollis
ENSEEUG00000004301	-	67	99.267	ENSFDAG00000000851	-	99	99.267	Fukomys_damarensis
ENSEEUG00000004301	-	72	92.384	ENSGALG00000023199	HNRNPDL	100	92.384	Gallus_gallus
ENSEEUG00000004301	-	72	92.739	ENSGAGG00000003646	HNRNPDL	100	92.739	Gopherus_agassizii
ENSEEUG00000004301	-	100	92.637	ENSGGOG00000003714	HNRNPDL	95	100.000	Gorilla_gorilla
ENSEEUG00000004301	-	64	94.403	ENSHGLG00000013420	-	90	94.403	Heterocephalus_glaber_female
ENSEEUG00000004301	-	81	73.591	ENSHGLG00000014427	-	88	94.924	Heterocephalus_glaber_female
ENSEEUG00000004301	-	100	90.544	ENSHGLG00000015791	HNRNPDL	100	90.307	Heterocephalus_glaber_female
ENSEEUG00000004301	-	72	82.178	ENSHGLG00100017644	-	100	79.208	Heterocephalus_glaber_male
ENSEEUG00000004301	-	69	78.671	ENSHGLG00100010072	-	93	76.573	Heterocephalus_glaber_male
ENSEEUG00000004301	-	81	93.548	ENSHGLG00100005262	HNRNPDL	98	93.134	Heterocephalus_glaber_male
ENSEEUG00000004301	-	78	77.064	ENSHGLG00100019080	-	97	78.481	Heterocephalus_glaber_male
ENSEEUG00000004301	-	72	80.795	ENSHGLG00100016282	-	100	77.483	Heterocephalus_glaber_male
ENSEEUG00000004301	-	70	69.831	ENSIPUG00000024951	hnrnpdl	96	72.945	Ictalurus_punctatus
ENSEEUG00000004301	-	100	92.637	ENSSTOG00000013979	HNRNPDL	95	100.000	Ictidomys_tridecemlineatus
ENSEEUG00000004301	-	62	100.000	ENSJJAG00000000674	-	91	67.868	Jaculus_jaculus
ENSEEUG00000004301	-	100	91.038	ENSJJAG00000021673	Hnrnpdl	100	91.745	Jaculus_jaculus
ENSEEUG00000004301	-	70	77.133	ENSLOCG00000010736	hnrnpdl	97	77.055	Lepisosteus_oculatus
ENSEEUG00000004301	-	100	92.162	ENSLAFG00000008612	HNRNPDL	100	92.162	Loxodonta_africana
ENSEEUG00000004301	-	63	51.527	ENSLAFG00000031444	-	71	59.140	Loxodonta_africana
ENSEEUG00000004301	-	100	93.112	ENSMFAG00000002275	HNRNPDL	95	100.000	Macaca_fascicularis
ENSEEUG00000004301	-	67	99.074	ENSMMUG00000015777	HNRNPDL	100	99.074	Macaca_mulatta
ENSEEUG00000004301	-	100	93.112	ENSMNEG00000045130	HNRNPDL	95	100.000	Macaca_nemestrina
ENSEEUG00000004301	-	72	98.675	ENSMLEG00000041600	HNRNPDL	100	98.675	Mandrillus_leucophaeus
ENSEEUG00000004301	-	72	94.040	ENSMLEG00000014825	-	100	94.040	Mandrillus_leucophaeus
ENSEEUG00000004301	-	67	92.279	ENSMGAG00000008033	HNRNPDL	100	92.279	Meleagris_gallopavo
ENSEEUG00000004301	-	100	91.038	ENSMAUG00000011132	Hnrnpdl	100	90.330	Mesocricetus_auratus
ENSEEUG00000004301	-	100	87.529	ENSMICG00000001445	-	93	100.000	Microcebus_murinus
ENSEEUG00000004301	-	50	95.215	ENSMICG00000037040	-	89	94.924	Microcebus_murinus
ENSEEUG00000004301	-	100	90.995	ENSMOCG00000015928	Hnrnpdl	100	92.180	Microtus_ochrogaster
ENSEEUG00000004301	-	53	100.000	ENSMODG00000006825	-	91	100.000	Monodelphis_domestica
ENSEEUG00000004301	-	100	89.549	ENSMODG00000011916	-	100	89.549	Monodelphis_domestica
ENSEEUG00000004301	-	100	92.637	ENSMUSG00000029328	Hnrnpdl	99	96.594	Mus_musculus
ENSEEUG00000004301	-	100	91.017	MGP_PahariEiJ_G0017226	Hnrnpdl	100	96.285	Mus_pahari
ENSEEUG00000004301	-	100	92.637	MGP_SPRETEiJ_G0028445	Hnrnpdl	100	96.594	Mus_spretus
ENSEEUG00000004301	-	78	73.384	ENSMPUG00000011188	-	99	65.818	Mustela_putorius_furo
ENSEEUG00000004301	-	67	99.240	ENSMPUG00000014753	-	99	99.240	Mustela_putorius_furo
ENSEEUG00000004301	-	76	91.195	ENSMPUG00000009986	-	97	91.167	Mustela_putorius_furo
ENSEEUG00000004301	-	69	75.610	ENSMPUG00000006259	-	100	75.610	Mustela_putorius_furo
ENSEEUG00000004301	-	70	45.819	ENSMLUG00000030192	-	63	57.377	Myotis_lucifugus
ENSEEUG00000004301	-	68	75.177	ENSMLUG00000025989	-	91	70.213	Myotis_lucifugus
ENSEEUG00000004301	-	100	92.399	ENSMLUG00000014452	-	100	92.399	Myotis_lucifugus
ENSEEUG00000004301	-	100	90.974	ENSNGAG00000015740	Hnrnpdl	100	90.974	Nannospalax_galili
ENSEEUG00000004301	-	100	93.349	ENSNLEG00000008636	HNRNPDL	95	100.000	Nomascus_leucogenys
ENSEEUG00000004301	-	59	91.463	ENSMEUG00000011454	-	93	90.789	Notamacropus_eugenii
ENSEEUG00000004301	-	81	76.786	ENSMEUG00000010033	HNRNPDL	93	79.677	Notamacropus_eugenii
ENSEEUG00000004301	-	67	98.162	ENSOPRG00000007178	-	100	98.162	Ochotona_princeps
ENSEEUG00000004301	-	71	94.949	ENSODEG00000003135	-	99	94.949	Octodon_degus
ENSEEUG00000004301	-	82	90.725	ENSODEG00000020231	-	95	91.071	Octodon_degus
ENSEEUG00000004301	-	78	88.685	ENSODEG00000000376	-	85	92.308	Octodon_degus
ENSEEUG00000004301	-	88	90.860	ENSODEG00000002106	-	93	90.860	Octodon_degus
ENSEEUG00000004301	-	72	92.384	ENSODEG00000004187	-	100	92.384	Octodon_degus
ENSEEUG00000004301	-	67	99.262	ENSOANG00000004651	HNRNPDL	100	99.262	Ornithorhynchus_anatinus
ENSEEUG00000004301	-	100	91.127	ENSOCUG00000013805	-	100	91.127	Oryctolagus_cuniculus
ENSEEUG00000004301	-	53	55.909	ENSOCUG00000025252	-	88	59.067	Oryctolagus_cuniculus
ENSEEUG00000004301	-	70	51.020	ENSOGAG00000024995	-	64	64.706	Otolemur_garnettii
ENSEEUG00000004301	-	100	90.736	ENSOGAG00000002501	-	100	91.449	Otolemur_garnettii
ENSEEUG00000004301	-	57	95.238	ENSOARG00000011472	-	73	95.238	Ovis_aries
ENSEEUG00000004301	-	63	76.604	ENSOARG00000002402	-	79	82.553	Ovis_aries
ENSEEUG00000004301	-	67	99.265	ENSOARG00000000824	-	84	99.265	Ovis_aries
ENSEEUG00000004301	-	100	93.112	ENSPPAG00000043177	HNRNPDL	95	100.000	Pan_paniscus
ENSEEUG00000004301	-	100	93.349	ENSPPRG00000013787	HNRNPDL	95	100.000	Panthera_pardus
ENSEEUG00000004301	-	72	98.675	ENSPTIG00000018505	HNRNPDL	100	98.675	Panthera_tigris_altaica
ENSEEUG00000004301	-	100	93.112	ENSPTRG00000016217	HNRNPDL	95	100.000	Pan_troglodytes
ENSEEUG00000004301	-	100	92.874	ENSPANG00000004761	HNRNPDL	95	100.000	Papio_anubis
ENSEEUG00000004301	-	70	76.871	ENSPKIG00000025514	hnrnpdl	97	75.768	Paramormyrops_kingsleyae
ENSEEUG00000004301	-	82	86.047	ENSPSIG00000016746	HNRNPDL	91	93.092	Pelodiscus_sinensis
ENSEEUG00000004301	-	100	80.615	ENSPEMG00000016545	-	96	94.118	Peromyscus_maniculatus_bairdii
ENSEEUG00000004301	-	100	88.836	ENSPCIG00000003089	-	93	100.000	Phascolarctos_cinereus
ENSEEUG00000004301	-	100	93.349	ENSPPYG00000014886	HNRNPDL	100	93.349	Pongo_abelii
ENSEEUG00000004301	-	100	82.898	ENSPCAG00000011543	HNRNPDL	100	82.898	Procavia_capensis
ENSEEUG00000004301	-	100	93.112	ENSPCOG00000019831	-	95	100.000	Propithecus_coquereli
ENSEEUG00000004301	-	100	85.036	ENSPVAG00000006816	HNRNPDL	100	85.036	Pteropus_vampyrus
ENSEEUG00000004301	-	67	71.786	ENSPNAG00000016380	hnrnpdl	83	74.390	Pygocentrus_nattereri
ENSEEUG00000004301	-	100	90.521	ENSRNOG00000002270	Hnrnpdl	100	90.974	Rattus_norvegicus
ENSEEUG00000004301	-	100	93.112	ENSRBIG00000030310	HNRNPDL	95	100.000	Rhinopithecus_bieti
ENSEEUG00000004301	-	100	93.112	ENSRROG00000034174	HNRNPDL	95	100.000	Rhinopithecus_roxellana
ENSEEUG00000004301	-	72	80.795	ENSSBOG00000022627	-	100	80.795	Saimiri_boliviensis_boliviensis
ENSEEUG00000004301	-	59	76.518	ENSSBOG00000028904	-	99	75.709	Saimiri_boliviensis_boliviensis
ENSEEUG00000004301	-	72	90.066	ENSSBOG00000020566	-	100	90.066	Saimiri_boliviensis_boliviensis
ENSEEUG00000004301	-	91	91.557	ENSSHAG00000013616	-	100	91.557	Sarcophilus_harrisii
ENSEEUG00000004301	-	70	77.133	ENSSFOG00015005893	hnrnpdl	97	77.133	Scleropages_formosus
ENSEEUG00000004301	-	65	93.827	ENSSARG00000009961	-	98	93.827	Sorex_araneus
ENSEEUG00000004301	-	72	85.149	ENSSPUG00000013700	HNRNPDL	100	86.469	Sphenodon_punctatus
ENSEEUG00000004301	-	100	92.399	ENSSSCG00000037245	-	95	100.000	Sus_scrofa
ENSEEUG00000004301	-	75	52.188	ENSSSCG00000012473	-	77	53.333	Sus_scrofa
ENSEEUG00000004301	-	67	93.750	ENSTGUG00000002850	HNRNPDL	100	93.750	Taeniopygia_guttata
ENSEEUG00000004301	-	96	87.192	ENSTBEG00000002817	-	99	84.788	Tupaia_belangeri
ENSEEUG00000004301	-	100	89.786	ENSTTRG00000001793	-	100	89.786	Tursiops_truncatus
ENSEEUG00000004301	-	100	93.112	ENSUAMG00000011358	HNRNPDL	95	100.000	Ursus_americanus
ENSEEUG00000004301	-	81	95.858	ENSUMAG00000008681	HNRNPDL	79	95.796	Ursus_maritimus
ENSEEUG00000004301	-	65	78.676	ENSVPAG00000002422	-	100	78.676	Vicugna_pacos
ENSEEUG00000004301	-	72	88.599	ENSVVUG00000013596	-	100	87.296	Vulpes_vulpes
ENSEEUG00000004301	-	100	92.637	ENSVVUG00000024653	HNRNPDL	95	100.000	Vulpes_vulpes
ENSEEUG00000004301	-	52	78.571	ENSVVUG00000001421	-	95	78.571	Vulpes_vulpes
ENSEEUG00000004301	-	70	82.192	ENSXETG00000023026	hnrnpdl	97	81.507	Xenopus_tropicalis