EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000004450 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 81570 bases
Position: chrGeneScaffold_2918:253-81822
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000004052	RF-1	PF00472.20	2.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000004452	-	1332	-	ENSEEUP00000004052	443 (aa)	-	UPI0000F6341B

Gene Model

Click here to download ENSEEUG00000004450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000004450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000004450	-	59	39.695	ENSEEUG00000002407	MTRF1L	96	39.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000004450	-	100	65.324	ENSG00000120662	MTRF1	91	76.800	Homo_sapiens
ENSEEUG00000004450	-	77	45.272	ENSAPOG00000010181	mtrf1	85	45.272	Acanthochromis_polyacanthus
ENSEEUG00000004450	-	100	66.071	ENSAMEG00000008696	MTRF1	100	65.625	Ailuropoda_melanoleuca
ENSEEUG00000004450	-	51	51.528	ENSACIG00000001495	mtrf1	92	51.528	Amphilophus_citrinellus
ENSEEUG00000004450	-	86	43.959	ENSAOCG00000002832	mtrf1	87	43.959	Amphiprion_ocellaris
ENSEEUG00000004450	-	86	43.445	ENSAPEG00000014844	mtrf1	87	43.188	Amphiprion_percula
ENSEEUG00000004450	-	83	44.504	ENSATEG00000017403	mtrf1	89	43.968	Anabas_testudineus
ENSEEUG00000004450	-	85	54.331	ENSAPLG00000009317	MTRF1	89	53.109	Anas_platyrhynchos
ENSEEUG00000004450	-	86	51.813	ENSACAG00000000897	MTRF1	87	50.518	Anolis_carolinensis
ENSEEUG00000004450	-	89	61.111	ENSANAG00000025310	-	99	64.151	Aotus_nancymaae
ENSEEUG00000004450	-	100	60.491	ENSANAG00000023063	-	100	60.045	Aotus_nancymaae
ENSEEUG00000004450	-	89	44.724	ENSACLG00000023945	mtrf1	88	44.472	Astatotilapia_calliptera
ENSEEUG00000004450	-	51	47.598	ENSAMXG00000031859	mtrf1	94	47.598	Astyanax_mexicanus
ENSEEUG00000004450	-	99	66.892	ENSBTAG00000012260	MTRF1	99	66.441	Bos_taurus
ENSEEUG00000004450	-	100	64.286	ENSCJAG00000017739	MTRF1	100	63.839	Callithrix_jacchus
ENSEEUG00000004450	-	100	66.370	ENSCAFG00000004795	MTRF1	100	65.924	Canis_familiaris
ENSEEUG00000004450	-	100	66.370	ENSCAFG00020018178	MTRF1	100	65.924	Canis_lupus_dingo
ENSEEUG00000004450	-	100	65.625	ENSCHIG00000011810	MTRF1	99	65.393	Capra_hircus
ENSEEUG00000004450	-	100	64.955	ENSTSYG00000006976	MTRF1	100	63.839	Carlito_syrichta
ENSEEUG00000004450	-	95	63.934	ENSCAPG00000013163	MTRF1	98	63.466	Cavia_aperea
ENSEEUG00000004450	-	100	62.277	ENSCPOG00000005264	MTRF1	100	61.830	Cavia_porcellus
ENSEEUG00000004450	-	100	64.955	ENSCCAG00000035116	MTRF1	100	64.509	Cebus_capucinus
ENSEEUG00000004450	-	100	65.548	ENSCATG00000009909	MTRF1	100	65.101	Cercocebus_atys
ENSEEUG00000004450	-	100	64.062	ENSCLAG00000000582	MTRF1	100	63.170	Chinchilla_lanigera
ENSEEUG00000004450	-	100	65.324	ENSCSAG00000017835	MTRF1	100	64.877	Chlorocebus_sabaeus
ENSEEUG00000004450	-	92	58.537	ENSCHOG00000011915	-	100	58.537	Choloepus_hoffmanni
ENSEEUG00000004450	-	98	52.584	ENSCPBG00000007969	MTRF1	98	52.360	Chrysemys_picta_bellii
ENSEEUG00000004450	-	100	65.101	ENSCANG00000040353	MTRF1	100	64.653	Colobus_angolensis_palliatus
ENSEEUG00000004450	-	100	61.607	ENSCGRG00001003065	Mtrf1	100	61.161	Cricetulus_griseus_chok1gshd
ENSEEUG00000004450	-	100	61.607	ENSCGRG00000002570	Mtrf1	100	61.161	Cricetulus_griseus_crigri
ENSEEUG00000004450	-	93	42.143	ENSCSEG00000005667	mtrf1	94	41.429	Cynoglossus_semilaevis
ENSEEUG00000004450	-	94	41.608	ENSCVAG00000021729	mtrf1	96	41.981	Cyprinodon_variegatus
ENSEEUG00000004450	-	53	41.949	ENSDARG00000033579	mtrf1	99	41.949	Danio_rerio
ENSEEUG00000004450	-	100	64.889	ENSDNOG00000034196	MTRF1	100	67.949	Dasypus_novemcinctus
ENSEEUG00000004450	-	99	63.004	ENSDORG00000016429	Mtrf1	99	62.556	Dipodomys_ordii
ENSEEUG00000004450	-	100	62.946	ENSETEG00000014811	MTRF1	100	62.054	Echinops_telfairi
ENSEEUG00000004450	-	53	41.102	ENSEBUG00000000778	mtrf1	96	41.102	Eptatretus_burgeri
ENSEEUG00000004450	-	100	66.518	ENSEASG00005015715	MTRF1	100	66.071	Equus_asinus_asinus
ENSEEUG00000004450	-	100	64.955	ENSECAG00000014389	MTRF1	97	64.509	Equus_caballus
ENSEEUG00000004450	-	85	42.257	ENSELUG00000006544	mtrf1	88	41.995	Esox_lucius
ENSEEUG00000004450	-	100	65.179	ENSFCAG00000031635	MTRF1	100	64.732	Felis_catus
ENSEEUG00000004450	-	85	52.493	ENSFALG00000008036	MTRF1	94	51.444	Ficedula_albicollis
ENSEEUG00000004450	-	100	63.170	ENSFDAG00000017881	MTRF1	100	62.723	Fukomys_damarensis
ENSEEUG00000004450	-	86	43.490	ENSFHEG00000019043	mtrf1	88	43.896	Fundulus_heteroclitus
ENSEEUG00000004450	-	85	41.316	ENSGMOG00000008608	mtrf1	99	41.470	Gadus_morhua
ENSEEUG00000004450	-	85	54.331	ENSGALG00000016951	MTRF1	83	53.281	Gallus_gallus
ENSEEUG00000004450	-	92	42.195	ENSGAFG00000007093	mtrf1	92	42.579	Gambusia_affinis
ENSEEUG00000004450	-	84	44.267	ENSGACG00000013728	mtrf1	97	44.681	Gasterosteus_aculeatus
ENSEEUG00000004450	-	70	57.827	ENSGAGG00000025696	MTRF1	99	57.508	Gopherus_agassizii
ENSEEUG00000004450	-	100	65.101	ENSGGOG00000002529	MTRF1	100	64.653	Gorilla_gorilla
ENSEEUG00000004450	-	100	64.286	ENSHGLG00000003210	MTRF1	100	63.839	Heterocephalus_glaber_female
ENSEEUG00000004450	-	100	64.286	ENSHGLG00100011843	MTRF1	100	63.839	Heterocephalus_glaber_male
ENSEEUG00000004450	-	86	42.298	ENSHCOG00000009449	mtrf1	86	42.969	Hippocampus_comes
ENSEEUG00000004450	-	100	64.286	ENSSTOG00000021682	MTRF1	100	64.062	Ictidomys_tridecemlineatus
ENSEEUG00000004450	-	100	61.161	ENSJJAG00000017590	Mtrf1	100	60.714	Jaculus_jaculus
ENSEEUG00000004450	-	88	43.797	ENSKMAG00000003231	mtrf1	87	44.332	Kryptolebias_marmoratus
ENSEEUG00000004450	-	52	48.291	ENSLBEG00000023151	mtrf1	93	48.291	Labrus_bergylta
ENSEEUG00000004450	-	52	48.291	ENSLBEG00000027169	-	93	48.291	Labrus_bergylta
ENSEEUG00000004450	-	88	52.020	ENSLACG00000010582	MTRF1	88	51.263	Latimeria_chalumnae
ENSEEUG00000004450	-	87	44.703	ENSLOCG00000005937	MTRF1	86	44.560	Lepisosteus_oculatus
ENSEEUG00000004450	-	99	53.153	ENSLAFG00000030499	-	99	52.596	Loxodonta_africana
ENSEEUG00000004450	-	100	64.062	ENSLAFG00000022177	-	100	63.616	Loxodonta_africana
ENSEEUG00000004450	-	100	65.324	ENSMFAG00000037972	MTRF1	100	64.877	Macaca_fascicularis
ENSEEUG00000004450	-	100	65.548	ENSMNEG00000035487	MTRF1	100	65.101	Macaca_nemestrina
ENSEEUG00000004450	-	100	65.324	ENSMLEG00000033582	MTRF1	100	64.877	Mandrillus_leucophaeus
ENSEEUG00000004450	-	92	43.675	ENSMAMG00000022048	mtrf1	93	43.437	Mastacembelus_armatus
ENSEEUG00000004450	-	89	44.724	ENSMZEG00005017922	mtrf1	88	44.472	Maylandia_zebra
ENSEEUG00000004450	-	86	53.627	ENSMGAG00000014971	MTRF1	92	52.591	Meleagris_gallopavo
ENSEEUG00000004450	-	100	61.830	ENSMAUG00000011661	Mtrf1	100	61.384	Mesocricetus_auratus
ENSEEUG00000004450	-	100	66.667	ENSMICG00000033131	MTRF1	100	66.219	Microcebus_murinus
ENSEEUG00000004450	-	100	60.938	ENSMOCG00000011945	Mtrf1	100	59.821	Microtus_ochrogaster
ENSEEUG00000004450	-	95	57.075	ENSMODG00000014772	MTRF1	95	56.604	Monodelphis_domestica
ENSEEUG00000004450	-	96	41.860	ENSMALG00000013274	mtrf1	93	41.860	Monopterus_albus
ENSEEUG00000004450	-	100	62.054	MGP_CAROLIEiJ_G0019539	Mtrf1	99	60.938	Mus_caroli
ENSEEUG00000004450	-	100	63.170	ENSMUSG00000022022	Mtrf1	100	62.723	Mus_musculus
ENSEEUG00000004450	-	100	62.416	MGP_PahariEiJ_G0030557	Mtrf1	100	61.969	Mus_pahari
ENSEEUG00000004450	-	100	62.946	MGP_SPRETEiJ_G0020435	Mtrf1	100	62.500	Mus_spretus
ENSEEUG00000004450	-	99	64.798	ENSMPUG00000001874	MTRF1	99	64.350	Mustela_putorius_furo
ENSEEUG00000004450	-	100	66.295	ENSMLUG00000017237	MTRF1	100	65.848	Myotis_lucifugus
ENSEEUG00000004450	-	100	64.509	ENSNGAG00000014460	Mtrf1	100	64.062	Nannospalax_galili
ENSEEUG00000004450	-	51	50.218	ENSNBRG00000004634	mtrf1	96	50.218	Neolamprologus_brichardi
ENSEEUG00000004450	-	100	65.101	ENSNLEG00000001236	MTRF1	100	64.653	Nomascus_leucogenys
ENSEEUG00000004450	-	94	54.265	ENSMEUG00000001846	MTRF1	95	53.791	Notamacropus_eugenii
ENSEEUG00000004450	-	52	56.466	ENSOPRG00000006450	-	70	55.172	Ochotona_princeps
ENSEEUG00000004450	-	100	61.745	ENSODEG00000005782	MTRF1	100	60.850	Octodon_degus
ENSEEUG00000004450	-	84	45.910	ENSONIG00000012476	mtrf1	97	45.646	Oreochromis_niloticus
ENSEEUG00000004450	-	70	55.063	ENSOANG00000003383	-	99	55.063	Ornithorhynchus_anatinus
ENSEEUG00000004450	-	100	64.062	ENSOCUG00000025207	MTRF1	100	63.616	Oryctolagus_cuniculus
ENSEEUG00000004450	-	86	46.094	ENSORLG00000003225	mtrf1	87	45.833	Oryzias_latipes
ENSEEUG00000004450	-	86	46.094	ENSORLG00020021048	mtrf1	86	45.833	Oryzias_latipes_hni
ENSEEUG00000004450	-	85	45.953	ENSORLG00015020957	mtrf1	87	45.573	Oryzias_latipes_hsok
ENSEEUG00000004450	-	85	45.833	ENSOMEG00000002022	mtrf1	87	45.573	Oryzias_melastigma
ENSEEUG00000004450	-	73	57.012	ENSOGAG00000026411	-	94	55.949	Otolemur_garnettii
ENSEEUG00000004450	-	100	60.268	ENSOGAG00000009719	-	100	59.821	Otolemur_garnettii
ENSEEUG00000004450	-	99	65.393	ENSOARG00000006994	MTRF1	99	64.944	Ovis_aries
ENSEEUG00000004450	-	100	65.324	ENSPPAG00000000050	MTRF1	100	64.877	Pan_paniscus
ENSEEUG00000004450	-	100	65.625	ENSPPRG00000009511	MTRF1	100	65.179	Panthera_pardus
ENSEEUG00000004450	-	100	65.625	ENSPTIG00000006673	MTRF1	100	65.179	Panthera_tigris_altaica
ENSEEUG00000004450	-	100	65.324	ENSPTRG00000005815	MTRF1	100	64.877	Pan_troglodytes
ENSEEUG00000004450	-	100	65.548	ENSPANG00000010809	MTRF1	100	65.101	Papio_anubis
ENSEEUG00000004450	-	85	42.708	ENSPKIG00000015711	mtrf1	90	42.931	Paramormyrops_kingsleyae
ENSEEUG00000004450	-	98	52.477	ENSPSIG00000004773	MTRF1	97	52.252	Pelodiscus_sinensis
ENSEEUG00000004450	-	53	49.160	ENSPMGG00000006724	mtrf1	96	49.160	Periophthalmus_magnuspinnatus
ENSEEUG00000004450	-	100	62.806	ENSPEMG00000020982	Mtrf1	100	62.361	Peromyscus_maniculatus_bairdii
ENSEEUG00000004450	-	76	40.517	ENSPMAG00000009849	mtrf1	99	40.517	Petromyzon_marinus
ENSEEUG00000004450	-	94	57.245	ENSPCIG00000012940	MTRF1	95	56.501	Phascolarctos_cinereus
ENSEEUG00000004450	-	86	43.603	ENSPFOG00000000254	mtrf1	87	44.010	Poecilia_formosa
ENSEEUG00000004450	-	86	43.864	ENSPLAG00000014280	mtrf1	87	44.271	Poecilia_latipinna
ENSEEUG00000004450	-	86	43.342	ENSPMEG00000023245	mtrf1	87	43.750	Poecilia_mexicana
ENSEEUG00000004450	-	52	45.494	ENSPREG00000018619	mtrf1	96	45.494	Poecilia_reticulata
ENSEEUG00000004450	-	100	64.430	ENSPPYG00000005313	MTRF1	100	63.982	Pongo_abelii
ENSEEUG00000004450	-	100	67.188	ENSPCOG00000018133	MTRF1	100	66.741	Propithecus_coquereli
ENSEEUG00000004450	-	100	65.625	ENSPVAG00000008573	MTRF1	100	65.179	Pteropus_vampyrus
ENSEEUG00000004450	-	51	51.092	ENSPNYG00000004357	mtrf1	92	51.092	Pundamilia_nyererei
ENSEEUG00000004450	-	87	41.476	ENSPNAG00000010682	mtrf1	89	41.221	Pygocentrus_nattereri
ENSEEUG00000004450	-	100	62.138	ENSRNOG00000047106	Mtrf1	100	61.693	Rattus_norvegicus
ENSEEUG00000004450	-	100	65.548	ENSRBIG00000007069	MTRF1	100	65.101	Rhinopithecus_bieti
ENSEEUG00000004450	-	100	65.548	ENSRROG00000035345	MTRF1	100	65.101	Rhinopithecus_roxellana
ENSEEUG00000004450	-	85	67.895	ENSSBOG00000004572	MTRF1	100	67.368	Saimiri_boliviensis_boliviensis
ENSEEUG00000004450	-	86	57.881	ENSSHAG00000018109	MTRF1	94	57.364	Sarcophilus_harrisii
ENSEEUG00000004450	-	86	44.819	ENSSFOG00015006191	mtrf1	87	44.301	Scleropages_formosus
ENSEEUG00000004450	-	87	43.590	ENSSMAG00000015740	mtrf1	87	43.333	Scophthalmus_maximus
ENSEEUG00000004450	-	90	44.417	ENSSDUG00000022608	mtrf1	78	44.417	Seriola_dumerili
ENSEEUG00000004450	-	90	45.161	ENSSLDG00000013584	mtrf1	78	45.161	Seriola_lalandi_dorsalis
ENSEEUG00000004450	-	100	64.877	ENSSARG00000002306	MTRF1	100	64.430	Sorex_araneus
ENSEEUG00000004450	-	53	52.321	ENSSPUG00000007354	MTRF1	97	52.321	Sphenodon_punctatus
ENSEEUG00000004450	-	95	41.492	ENSSPAG00000000881	mtrf1	96	41.492	Stegastes_partitus
ENSEEUG00000004450	-	100	66.071	ENSSSCG00000009436	MTRF1	100	65.625	Sus_scrofa
ENSEEUG00000004450	-	86	52.332	ENSTGUG00000012422	MTRF1	93	51.295	Taeniopygia_guttata
ENSEEUG00000004450	-	90	44.198	ENSTRUG00000000396	mtrf1	89	44.198	Takifugu_rubripes
ENSEEUG00000004450	-	83	45.553	ENSTNIG00000017149	-	100	45.128	Tetraodon_nigroviridis
ENSEEUG00000004450	-	54	85.062	ENSTBEG00000004696	-	100	85.062	Tupaia_belangeri
ENSEEUG00000004450	-	100	67.188	ENSTTRG00000010370	MTRF1	100	66.741	Tursiops_truncatus
ENSEEUG00000004450	-	100	66.295	ENSUMAG00000014772	MTRF1	100	65.848	Ursus_maritimus
ENSEEUG00000004450	-	100	65.033	ENSVPAG00000002565	MTRF1	100	64.588	Vicugna_pacos
ENSEEUG00000004450	-	100	65.479	ENSVVUG00000028755	MTRF1	100	65.033	Vulpes_vulpes
ENSEEUG00000004450	-	82	53.552	ENSXETG00000018904	mtrf1	94	52.732	Xenopus_tropicalis
ENSEEUG00000004450	-	52	44.444	ENSXCOG00000020386	mtrf1	95	44.444	Xiphophorus_couchianus
ENSEEUG00000004450	-	86	42.298	ENSXMAG00000009853	mtrf1	86	42.708	Xiphophorus_maculatus