EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000004530 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 80843 bases
Position: chrGeneScaffold_1157:5830-86672
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000004165	Ago_hook	PF10427.9	9.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000004575	TNRC6A-201	5805	-	ENSEEUP00000004165	1934 (aa)	-	UPI0000F63161

Gene Model

Click here to download ENSEEUG00000004530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000004530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000004530	TNRC6A	83	45.361	ENSEEUG00000010008	TNRC6C	90	45.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000004530	TNRC6A	99	89.504	ENSG00000090905	TNRC6A	98	89.504	Homo_sapiens
ENSEEUG00000004530	TNRC6A	99	89.869	ENSAMEG00000009333	TNRC6A	99	89.812	Ailuropoda_melanoleuca
ENSEEUG00000004530	TNRC6A	99	76.106	ENSAPLG00000009978	TNRC6A	100	76.106	Anas_platyrhynchos
ENSEEUG00000004530	TNRC6A	99	50.396	ENSACAG00000011857	TNRC6A	97	52.293	Anolis_carolinensis
ENSEEUG00000004530	TNRC6A	99	89.138	ENSANAG00000025252	TNRC6A	97	91.915	Aotus_nancymaae
ENSEEUG00000004530	TNRC6A	92	52.652	ENSAMXG00000019919	tnrc6a	100	51.971	Astyanax_mexicanus
ENSEEUG00000004530	TNRC6A	99	89.256	ENSBTAG00000017999	TNRC6A	99	88.836	Bos_taurus
ENSEEUG00000004530	TNRC6A	99	89.433	ENSCJAG00000020677	TNRC6A	98	89.485	Callithrix_jacchus
ENSEEUG00000004530	TNRC6A	99	89.760	ENSCAFG00000017531	TNRC6A	98	89.812	Canis_familiaris
ENSEEUG00000004530	TNRC6A	99	88.586	ENSCAFG00020021160	TNRC6A	99	88.586	Canis_lupus_dingo
ENSEEUG00000004530	TNRC6A	99	86.520	ENSCHIG00000019448	TNRC6A	97	89.558	Capra_hircus
ENSEEUG00000004530	TNRC6A	99	89.243	ENSTSYG00000012711	TNRC6A	99	89.209	Carlito_syrichta
ENSEEUG00000004530	TNRC6A	99	86.005	ENSCPOG00000036684	TNRC6A	98	86.005	Cavia_porcellus
ENSEEUG00000004530	TNRC6A	99	89.399	ENSCCAG00000033664	TNRC6A	99	89.191	Cebus_capucinus
ENSEEUG00000004530	TNRC6A	99	88.456	ENSCATG00000019284	TNRC6A	97	88.508	Cercocebus_atys
ENSEEUG00000004530	TNRC6A	99	83.081	ENSCLAG00000010217	TNRC6A	97	83.081	Chinchilla_lanigera
ENSEEUG00000004530	TNRC6A	99	89.869	ENSCSAG00000006561	TNRC6A	98	89.817	Chlorocebus_sabaeus
ENSEEUG00000004530	TNRC6A	94	84.286	ENSCHOG00000009374	TNRC6A	92	84.286	Choloepus_hoffmanni
ENSEEUG00000004530	TNRC6A	92	74.074	ENSCPBG00000001881	TNRC6A	99	74.074	Chrysemys_picta_bellii
ENSEEUG00000004530	TNRC6A	99	89.556	ENSCANG00000041549	TNRC6A	98	89.556	Colobus_angolensis_palliatus
ENSEEUG00000004530	TNRC6A	99	87.272	ENSCGRG00001015021	Tnrc6a	99	87.213	Cricetulus_griseus_chok1gshd
ENSEEUG00000004530	TNRC6A	99	84.188	ENSCGRG00000013351	Tnrc6a	97	84.031	Cricetulus_griseus_crigri
ENSEEUG00000004530	TNRC6A	92	52.339	ENSDARG00000079688	tnrc6a	99	52.531	Danio_rerio
ENSEEUG00000004530	TNRC6A	99	86.871	ENSDNOG00000013989	TNRC6A	96	98.000	Dasypus_novemcinctus
ENSEEUG00000004530	TNRC6A	99	81.234	ENSETEG00000014658	TNRC6A	99	81.234	Echinops_telfairi
ENSEEUG00000004530	TNRC6A	99	88.982	ENSEASG00005017693	TNRC6A	99	88.906	Equus_asinus_asinus
ENSEEUG00000004530	TNRC6A	99	88.982	ENSECAG00000025056	TNRC6A	99	89.034	Equus_caballus
ENSEEUG00000004530	TNRC6A	99	89.133	ENSFCAG00000025236	TNRC6A	99	89.080	Felis_catus
ENSEEUG00000004530	TNRC6A	99	74.240	ENSFALG00000003757	TNRC6A	97	74.227	Ficedula_albicollis
ENSEEUG00000004530	TNRC6A	92	74.678	ENSGALG00000006068	TNRC6A	99	74.734	Gallus_gallus
ENSEEUG00000004530	TNRC6A	92	73.672	ENSGAGG00000023209	TNRC6A	99	73.672	Gopherus_agassizii
ENSEEUG00000004530	TNRC6A	99	89.765	ENSGGOG00000005137	TNRC6A	99	89.504	Gorilla_gorilla
ENSEEUG00000004530	TNRC6A	98	85.407	ENSHGLG00000012474	-	97	85.354	Heterocephalus_glaber_female
ENSEEUG00000004530	TNRC6A	92	81.818	ENSHGLG00000007368	-	89	81.818	Heterocephalus_glaber_female
ENSEEUG00000004530	TNRC6A	98	85.008	ENSHGLG00100012496	-	97	85.060	Heterocephalus_glaber_male
ENSEEUG00000004530	TNRC6A	99	88.999	ENSSTOG00000023394	TNRC6A	96	88.895	Ictidomys_tridecemlineatus
ENSEEUG00000004530	TNRC6A	99	64.657	ENSLACG00000006277	TNRC6A	100	65.379	Latimeria_chalumnae
ENSEEUG00000004530	TNRC6A	100	69.316	ENSLOCG00000005517	tnrc6a	90	69.316	Lepisosteus_oculatus
ENSEEUG00000004530	TNRC6A	99	85.491	ENSLAFG00000004209	TNRC6A	99	85.535	Loxodonta_africana
ENSEEUG00000004530	TNRC6A	99	88.404	ENSMFAG00000003824	TNRC6A	99	88.456	Macaca_fascicularis
ENSEEUG00000004530	TNRC6A	99	89.504	ENSMMUG00000020428	TNRC6A	98	89.504	Macaca_mulatta
ENSEEUG00000004530	TNRC6A	99	89.172	ENSMNEG00000034854	TNRC6A	99	88.345	Macaca_nemestrina
ENSEEUG00000004530	TNRC6A	99	88.019	ENSMLEG00000042737	TNRC6A	97	87.863	Mandrillus_leucophaeus
ENSEEUG00000004530	TNRC6A	99	74.625	ENSMGAG00000006455	TNRC6A	97	74.663	Meleagris_gallopavo
ENSEEUG00000004530	TNRC6A	99	84.969	ENSMAUG00000012750	Tnrc6a	93	98.000	Mesocricetus_auratus
ENSEEUG00000004530	TNRC6A	99	90.339	ENSMICG00000030685	TNRC6A	99	90.078	Microcebus_murinus
ENSEEUG00000004530	TNRC6A	99	85.013	ENSMOCG00000000152	Tnrc6a	97	84.961	Microtus_ochrogaster
ENSEEUG00000004530	TNRC6A	99	76.300	ENSMODG00000016348	TNRC6A	96	76.504	Monodelphis_domestica
ENSEEUG00000004530	TNRC6A	99	84.178	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	87.429	Mus_caroli
ENSEEUG00000004530	TNRC6A	99	84.648	ENSMUSG00000052707	Tnrc6a	99	87.857	Mus_musculus
ENSEEUG00000004530	TNRC6A	99	84.760	MGP_PahariEiJ_G0013635	Tnrc6a	100	88.143	Mus_pahari
ENSEEUG00000004530	TNRC6A	99	86.945	MGP_SPRETEiJ_G0031539	Tnrc6a	100	87.857	Mus_spretus
ENSEEUG00000004530	TNRC6A	99	76.855	ENSMPUG00000012324	TNRC6A	100	76.698	Mustela_putorius_furo
ENSEEUG00000004530	TNRC6A	99	87.002	ENSMLUG00000002701	TNRC6A	100	87.002	Myotis_lucifugus
ENSEEUG00000004530	TNRC6A	99	85.856	ENSNGAG00000020702	Tnrc6a	98	85.804	Nannospalax_galili
ENSEEUG00000004530	TNRC6A	99	86.923	ENSNLEG00000011851	TNRC6A	98	86.975	Nomascus_leucogenys
ENSEEUG00000004530	TNRC6A	76	80.177	ENSMEUG00000015959	-	74	80.177	Notamacropus_eugenii
ENSEEUG00000004530	TNRC6A	95	87.246	ENSOPRG00000005819	TNRC6A	93	87.373	Ochotona_princeps
ENSEEUG00000004530	TNRC6A	98	81.489	ENSODEG00000012802	TNRC6A	97	81.856	Octodon_degus
ENSEEUG00000004530	TNRC6A	88	77.881	ENSOANG00000007672	TNRC6A	100	77.881	Ornithorhynchus_anatinus
ENSEEUG00000004530	TNRC6A	99	86.283	ENSOCUG00000004325	TNRC6A	100	86.283	Oryctolagus_cuniculus
ENSEEUG00000004530	TNRC6A	99	89.254	ENSOGAG00000006666	TNRC6A	98	89.254	Otolemur_garnettii
ENSEEUG00000004530	TNRC6A	99	88.033	ENSOARG00000017950	TNRC6A	98	87.617	Ovis_aries
ENSEEUG00000004530	TNRC6A	99	89.010	ENSPPAG00000028379	TNRC6A	99	89.062	Pan_paniscus
ENSEEUG00000004530	TNRC6A	99	89.133	ENSPPRG00000005861	TNRC6A	98	89.080	Panthera_pardus
ENSEEUG00000004530	TNRC6A	99	88.303	ENSPTIG00000006346	TNRC6A	98	88.355	Panthera_tigris_altaica
ENSEEUG00000004530	TNRC6A	99	88.808	ENSPTRG00000007898	TNRC6A	99	89.068	Pan_troglodytes
ENSEEUG00000004530	TNRC6A	99	87.435	ENSPANG00000018523	TNRC6A	99	86.712	Papio_anubis
ENSEEUG00000004530	TNRC6A	92	50.807	ENSPKIG00000012859	tnrc6a	99	53.364	Paramormyrops_kingsleyae
ENSEEUG00000004530	TNRC6A	78	69.346	ENSPSIG00000003965	TNRC6A	100	69.346	Pelodiscus_sinensis
ENSEEUG00000004530	TNRC6A	99	85.535	ENSPEMG00000016318	Tnrc6a	98	85.483	Peromyscus_maniculatus_bairdii
ENSEEUG00000004530	TNRC6A	99	77.766	ENSPCIG00000012106	TNRC6A	100	77.818	Phascolarctos_cinereus
ENSEEUG00000004530	TNRC6A	99	89.306	ENSPPYG00000007202	TNRC6A	98	89.306	Pongo_abelii
ENSEEUG00000004530	TNRC6A	94	97.938	ENSPCAG00000008260	TNRC6A	92	97.938	Procavia_capensis
ENSEEUG00000004530	TNRC6A	99	87.885	ENSPCOG00000010134	TNRC6A	97	87.833	Propithecus_coquereli
ENSEEUG00000004530	TNRC6A	89	70.557	ENSPVAG00000012066	TNRC6A	97	70.757	Pteropus_vampyrus
ENSEEUG00000004530	TNRC6A	99	87.134	ENSRNOG00000024737	Tnrc6a	98	86.932	Rattus_norvegicus
ENSEEUG00000004530	TNRC6A	99	89.452	ENSRBIG00000014222	TNRC6A	99	89.452	Rhinopithecus_bieti
ENSEEUG00000004530	TNRC6A	99	89.347	ENSRROG00000032360	TNRC6A	98	89.347	Rhinopithecus_roxellana
ENSEEUG00000004530	TNRC6A	99	88.570	ENSSBOG00000036197	TNRC6A	100	90.643	Saimiri_boliviensis_boliviensis
ENSEEUG00000004530	TNRC6A	92	75.845	ENSSHAG00000008811	TNRC6A	99	79.213	Sarcophilus_harrisii
ENSEEUG00000004530	TNRC6A	92	54.221	ENSSFOG00015008920	tnrc6a	98	65.957	Scleropages_formosus
ENSEEUG00000004530	TNRC6A	73	81.522	ENSSARG00000002479	TNRC6A	89	81.884	Sorex_araneus
ENSEEUG00000004530	TNRC6A	91	73.363	ENSSPUG00000010525	TNRC6A	99	73.404	Sphenodon_punctatus
ENSEEUG00000004530	TNRC6A	99	87.585	ENSSSCG00000038870	TNRC6A	100	91.398	Sus_scrofa
ENSEEUG00000004530	TNRC6A	99	72.855	ENSTGUG00000006142	TNRC6A	97	72.803	Taeniopygia_guttata
ENSEEUG00000004530	TNRC6A	99	87.317	ENSTBEG00000014965	TNRC6A	99	87.258	Tupaia_belangeri
ENSEEUG00000004530	TNRC6A	93	88.644	ENSTTRG00000002008	TNRC6A	90	88.457	Tursiops_truncatus
ENSEEUG00000004530	TNRC6A	80	89.010	ENSUAMG00000006656	-	93	88.946	Ursus_americanus
ENSEEUG00000004530	TNRC6A	99	89.256	ENSUMAG00000008274	TNRC6A	100	89.009	Ursus_maritimus
ENSEEUG00000004530	TNRC6A	51	97.000	ENSVPAG00000010764	-	50	97.000	Vicugna_pacos
ENSEEUG00000004530	TNRC6A	99	89.760	ENSVVUG00000005380	TNRC6A	98	92.689	Vulpes_vulpes
ENSEEUG00000004530	TNRC6A	95	60.944	ENSXETG00000030437	TNRC6A	99	61.240	Xenopus_tropicalis