EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000004559 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 22811 bases
Position: chrGeneScaffold_3228:141-22951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000004155	RNA_pol_Rpb2_1	PF04563.15	3e-16	1	1
ENSEEUP00000004155	RNA_pol_Rpb2_3	PF04565.16	4.9e-28	1	1
ENSEEUP00000004155	RNA_pol_Rpb2_7	PF04560.20	1.6e-22	1	1
ENSEEUP00000004155	RNA_pol_Rpb2_6	PF00562.28	8.2e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000004564	-	3231	-	ENSEEUP00000004155	1076 (aa)	-	UPI0000F61E15

Gene Model

Click here to download ENSEEUG00000004559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000004559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000004559	-	80	96.928	ENSG00000125630	POLR1B	77	97.674	Homo_sapiens
ENSEEUG00000004559	-	80	88.014	ENSAPOG00000000931	polr1b	76	88.014	Acanthochromis_polyacanthus
ENSEEUG00000004559	-	80	96.587	ENSAMEG00000010826	POLR1B	76	96.587	Ailuropoda_melanoleuca
ENSEEUG00000004559	-	80	88.356	ENSACIG00000002290	polr1b	76	88.356	Amphilophus_citrinellus
ENSEEUG00000004559	-	80	88.356	ENSAOCG00000004249	polr1b	76	88.356	Amphiprion_ocellaris
ENSEEUG00000004559	-	80	88.356	ENSAPEG00000004971	polr1b	76	88.356	Amphiprion_percula
ENSEEUG00000004559	-	80	89.384	ENSATEG00000010957	polr1b	76	89.384	Anabas_testudineus
ENSEEUG00000004559	-	74	80.000	ENSAPLG00000004142	POLR1B	74	80.000	Anas_platyrhynchos
ENSEEUG00000004559	-	51	88.356	ENSACAG00000007117	-	80	89.041	Anolis_carolinensis
ENSEEUG00000004559	-	80	95.904	ENSANAG00000026201	POLR1B	75	95.904	Aotus_nancymaae
ENSEEUG00000004559	-	80	88.014	ENSACLG00000019089	polr1b	76	88.014	Astatotilapia_calliptera
ENSEEUG00000004559	-	80	87.329	ENSAMXG00000037818	polr1b	76	87.329	Astyanax_mexicanus
ENSEEUG00000004559	-	80	94.881	ENSBTAG00000014166	POLR1B	76	94.881	Bos_taurus
ENSEEUG00000004559	-	73	57.679	WBGene00008781	rpoa-2	71	57.679	Caenorhabditis_elegans
ENSEEUG00000004559	-	80	96.587	ENSCJAG00000016433	POLR1B	75	96.587	Callithrix_jacchus
ENSEEUG00000004559	-	80	96.246	ENSCAFG00000007174	POLR1B	76	96.246	Canis_familiaris
ENSEEUG00000004559	-	80	96.246	ENSCAFG00020017367	POLR1B	76	96.246	Canis_lupus_dingo
ENSEEUG00000004559	-	80	95.563	ENSCHIG00000014527	POLR1B	76	95.563	Capra_hircus
ENSEEUG00000004559	-	80	94.881	ENSTSYG00000003669	POLR1B	76	94.881	Carlito_syrichta
ENSEEUG00000004559	-	74	97.270	ENSCAPG00000012821	POLR1B	68	97.270	Cavia_aperea
ENSEEUG00000004559	-	80	97.270	ENSCPOG00000015744	POLR1B	76	97.270	Cavia_porcellus
ENSEEUG00000004559	-	80	96.587	ENSCCAG00000035252	POLR1B	76	96.587	Cebus_capucinus
ENSEEUG00000004559	-	80	97.270	ENSCATG00000037382	POLR1B	76	97.270	Cercocebus_atys
ENSEEUG00000004559	-	80	97.270	ENSCLAG00000004899	POLR1B	76	97.270	Chinchilla_lanigera
ENSEEUG00000004559	-	80	97.270	ENSCSAG00000016783	POLR1B	76	97.270	Chlorocebus_sabaeus
ENSEEUG00000004559	-	61	94.178	ENSCHOG00000007229	POLR1B	67	94.178	Choloepus_hoffmanni
ENSEEUG00000004559	-	80	94.178	ENSCPBG00000003962	POLR1B	77	94.178	Chrysemys_picta_bellii
ENSEEUG00000004559	-	79	62.329	ENSCING00000003329	-	75	62.329	Ciona_intestinalis
ENSEEUG00000004559	-	51	59.524	ENSCSAVG00000007982	-	62	59.524	Ciona_savignyi
ENSEEUG00000004559	-	80	97.270	ENSCANG00000039531	POLR1B	76	97.270	Colobus_angolensis_palliatus
ENSEEUG00000004559	-	80	96.246	ENSCGRG00001014254	Polr1b	76	96.246	Cricetulus_griseus_chok1gshd
ENSEEUG00000004559	-	80	96.246	ENSCGRG00000017847	Polr1b	76	96.246	Cricetulus_griseus_crigri
ENSEEUG00000004559	-	80	87.671	ENSCSEG00000008564	polr1b	76	87.671	Cynoglossus_semilaevis
ENSEEUG00000004559	-	80	88.356	ENSCVAG00000005824	polr1b	76	88.356	Cyprinodon_variegatus
ENSEEUG00000004559	-	80	87.285	ENSDARG00000077469	polr1b	76	87.285	Danio_rerio
ENSEEUG00000004559	-	80	94.863	ENSDNOG00000017718	POLR1B	74	94.863	Dasypus_novemcinctus
ENSEEUG00000004559	-	80	96.246	ENSDORG00000014309	Polr1b	76	96.246	Dipodomys_ordii
ENSEEUG00000004559	-	74	57.534	FBgn0003278	RpI135	71	57.338	Drosophila_melanogaster
ENSEEUG00000004559	-	72	95.904	ENSETEG00000004001	POLR1B	67	95.904	Echinops_telfairi
ENSEEUG00000004559	-	56	70.847	ENSEBUG00000015791	polr1b	80	70.847	Eptatretus_burgeri
ENSEEUG00000004559	-	80	97.270	ENSEASG00005006504	POLR1B	76	97.270	Equus_asinus_asinus
ENSEEUG00000004559	-	80	97.270	ENSECAG00000010062	POLR1B	76	97.270	Equus_caballus
ENSEEUG00000004559	-	80	85.959	ENSELUG00000019627	polr1b	76	85.959	Esox_lucius
ENSEEUG00000004559	-	80	97.952	ENSFCAG00000008091	POLR1B	76	97.952	Felis_catus
ENSEEUG00000004559	-	74	76.712	ENSFALG00000000717	POLR1B	79	76.712	Ficedula_albicollis
ENSEEUG00000004559	-	80	97.611	ENSFDAG00000020976	POLR1B	76	97.611	Fukomys_damarensis
ENSEEUG00000004559	-	69	89.041	ENSFHEG00000000533	polr1b	66	91.111	Fundulus_heteroclitus
ENSEEUG00000004559	-	72	82.587	ENSGMOG00000005847	polr1b	72	82.587	Gadus_morhua
ENSEEUG00000004559	-	80	78.276	ENSGALG00000032273	POLR1B	77	78.276	Gallus_gallus
ENSEEUG00000004559	-	80	87.671	ENSGAFG00000001383	polr1b	76	87.671	Gambusia_affinis
ENSEEUG00000004559	-	80	86.986	ENSGACG00000003012	polr1b	76	86.986	Gasterosteus_aculeatus
ENSEEUG00000004559	-	80	93.836	ENSGAGG00000016312	POLR1B	78	93.836	Gopherus_agassizii
ENSEEUG00000004559	-	80	97.270	ENSGGOG00000013494	POLR1B	79	97.270	Gorilla_gorilla
ENSEEUG00000004559	-	80	88.014	ENSHBUG00000012650	polr1b	76	88.014	Haplochromis_burtoni
ENSEEUG00000004559	-	80	97.611	ENSHGLG00000011497	POLR1B	76	97.611	Heterocephalus_glaber_female
ENSEEUG00000004559	-	80	97.611	ENSHGLG00100009371	POLR1B	76	97.611	Heterocephalus_glaber_male
ENSEEUG00000004559	-	80	86.644	ENSHCOG00000000709	polr1b	76	86.644	Hippocampus_comes
ENSEEUG00000004559	-	80	87.671	ENSIPUG00000018216	polr1b	76	87.671	Ictalurus_punctatus
ENSEEUG00000004559	-	80	96.246	ENSSTOG00000008160	POLR1B	80	96.246	Ictidomys_tridecemlineatus
ENSEEUG00000004559	-	71	100.000	ENSJJAG00000000143	Polr1b	69	100.000	Jaculus_jaculus
ENSEEUG00000004559	-	80	87.629	ENSKMAG00000016037	polr1b	76	87.629	Kryptolebias_marmoratus
ENSEEUG00000004559	-	80	85.959	ENSLBEG00000027396	polr1b	76	85.959	Labrus_bergylta
ENSEEUG00000004559	-	80	90.753	ENSLACG00000009481	POLR1B	76	90.753	Latimeria_chalumnae
ENSEEUG00000004559	-	80	87.329	ENSLOCG00000016558	polr1b	76	87.329	Lepisosteus_oculatus
ENSEEUG00000004559	-	75	96.246	ENSLAFG00000007659	POLR1B	71	96.246	Loxodonta_africana
ENSEEUG00000004559	-	80	97.270	ENSMFAG00000032912	POLR1B	77	97.270	Macaca_fascicularis
ENSEEUG00000004559	-	80	97.270	ENSMMUG00000009468	POLR1B	77	97.270	Macaca_mulatta
ENSEEUG00000004559	-	80	96.928	ENSMNEG00000036047	POLR1B	76	96.928	Macaca_nemestrina
ENSEEUG00000004559	-	75	97.270	ENSMLEG00000030588	POLR1B	77	97.674	Mandrillus_leucophaeus
ENSEEUG00000004559	-	80	89.041	ENSMAMG00000013118	polr1b	76	89.041	Mastacembelus_armatus
ENSEEUG00000004559	-	80	88.014	ENSMZEG00005011850	polr1b	76	88.014	Maylandia_zebra
ENSEEUG00000004559	-	71	78.621	ENSMGAG00000007074	POLR1B	73	78.621	Meleagris_gallopavo
ENSEEUG00000004559	-	61	95.904	ENSMAUG00000010593	Polr1b	66	95.904	Mesocricetus_auratus
ENSEEUG00000004559	-	80	95.222	ENSMICG00000013245	POLR1B	76	95.222	Microcebus_murinus
ENSEEUG00000004559	-	80	96.246	ENSMOCG00000005942	Polr1b	76	96.246	Microtus_ochrogaster
ENSEEUG00000004559	-	80	87.671	ENSMMOG00000008388	polr1b	76	87.671	Mola_mola
ENSEEUG00000004559	-	80	95.563	ENSMODG00000006573	POLR1B	76	95.563	Monodelphis_domestica
ENSEEUG00000004559	-	80	89.384	ENSMALG00000008958	polr1b	75	89.384	Monopterus_albus
ENSEEUG00000004559	-	80	96.246	MGP_CAROLIEiJ_G0024281	Polr1b	80	96.246	Mus_caroli
ENSEEUG00000004559	-	80	95.563	ENSMUSG00000027395	Polr1b	76	95.563	Mus_musculus
ENSEEUG00000004559	-	80	95.222	MGP_PahariEiJ_G0025726	Polr1b	76	95.222	Mus_pahari
ENSEEUG00000004559	-	80	96.246	MGP_SPRETEiJ_G0025201	Polr1b	76	96.246	Mus_spretus
ENSEEUG00000004559	-	80	95.563	ENSMPUG00000009644	POLR1B	76	95.563	Mustela_putorius_furo
ENSEEUG00000004559	-	80	96.587	ENSMLUG00000004910	POLR1B	76	96.587	Myotis_lucifugus
ENSEEUG00000004559	-	80	95.904	ENSNGAG00000021472	Polr1b	76	95.904	Nannospalax_galili
ENSEEUG00000004559	-	80	88.014	ENSNBRG00000017979	polr1b	76	88.014	Neolamprologus_brichardi
ENSEEUG00000004559	-	75	96.928	ENSNLEG00000001656	POLR1B	76	96.928	Nomascus_leucogenys
ENSEEUG00000004559	-	57	95.563	ENSMEUG00000013915	POLR1B	54	95.563	Notamacropus_eugenii
ENSEEUG00000004559	-	80	94.198	ENSOPRG00000012742	POLR1B	76	94.198	Ochotona_princeps
ENSEEUG00000004559	-	69	96.246	ENSODEG00000005501	POLR1B	69	96.246	Octodon_degus
ENSEEUG00000004559	-	80	88.699	ENSONIG00000010382	polr1b	76	88.699	Oreochromis_niloticus
ENSEEUG00000004559	-	78	91.809	ENSOANG00000003621	POLR1B	80	91.809	Ornithorhynchus_anatinus
ENSEEUG00000004559	-	80	95.563	ENSOCUG00000006058	POLR1B	76	95.563	Oryctolagus_cuniculus
ENSEEUG00000004559	-	80	86.986	ENSORLG00000000890	polr1b	76	86.986	Oryzias_latipes
ENSEEUG00000004559	-	80	87.329	ENSORLG00015011105	polr1b	76	87.329	Oryzias_latipes_hsok
ENSEEUG00000004559	-	80	87.329	ENSOMEG00000005073	polr1b	76	87.329	Oryzias_melastigma
ENSEEUG00000004559	-	80	95.904	ENSOGAG00000007367	POLR1B	74	95.904	Otolemur_garnettii
ENSEEUG00000004559	-	80	95.222	ENSOARG00000020904	POLR1B	71	97.778	Ovis_aries
ENSEEUG00000004559	-	80	97.270	ENSPPAG00000002774	POLR1B	76	97.270	Pan_paniscus
ENSEEUG00000004559	-	80	97.952	ENSPPRG00000005760	POLR1B	75	97.952	Panthera_pardus
ENSEEUG00000004559	-	80	97.952	ENSPTIG00000013496	POLR1B	76	97.952	Panthera_tigris_altaica
ENSEEUG00000004559	-	80	97.270	ENSPTRG00000012366	POLR1B	76	97.270	Pan_troglodytes
ENSEEUG00000004559	-	80	97.270	ENSPANG00000023423	POLR1B	75	97.270	Papio_anubis
ENSEEUG00000004559	-	80	86.301	ENSPKIG00000007536	polr1b	76	86.301	Paramormyrops_kingsleyae
ENSEEUG00000004559	-	80	93.151	ENSPSIG00000002443	POLR1B	79	93.151	Pelodiscus_sinensis
ENSEEUG00000004559	-	80	87.329	ENSPMGG00000021622	polr1b	76	87.329	Periophthalmus_magnuspinnatus
ENSEEUG00000004559	-	80	94.881	ENSPEMG00000008619	Polr1b	76	94.881	Peromyscus_maniculatus_bairdii
ENSEEUG00000004559	-	80	95.904	ENSPCIG00000029738	POLR1B	72	95.904	Phascolarctos_cinereus
ENSEEUG00000004559	-	80	88.014	ENSPFOG00000010484	polr1b	76	88.014	Poecilia_formosa
ENSEEUG00000004559	-	80	88.014	ENSPLAG00000007518	polr1b	76	88.014	Poecilia_latipinna
ENSEEUG00000004559	-	80	88.356	ENSPMEG00000006810	polr1b	76	88.356	Poecilia_mexicana
ENSEEUG00000004559	-	80	88.699	ENSPREG00000002867	polr1b	76	88.699	Poecilia_reticulata
ENSEEUG00000004559	-	80	97.270	ENSPPYG00000012168	POLR1B	76	97.270	Pongo_abelii
ENSEEUG00000004559	-	69	95.904	ENSPCAG00000013293	POLR1B	65	95.904	Procavia_capensis
ENSEEUG00000004559	-	80	94.881	ENSPCOG00000015852	POLR1B	75	94.881	Propithecus_coquereli
ENSEEUG00000004559	-	67	92.833	ENSPVAG00000005727	POLR1B	58	95.556	Pteropus_vampyrus
ENSEEUG00000004559	-	80	87.671	ENSPNYG00000004767	polr1b	76	87.671	Pundamilia_nyererei
ENSEEUG00000004559	-	80	88.356	ENSPNAG00000013503	polr1b	72	88.356	Pygocentrus_nattereri
ENSEEUG00000004559	-	73	95.904	ENSRNOG00000018349	Polr1b	69	95.904	Rattus_norvegicus
ENSEEUG00000004559	-	80	97.270	ENSRBIG00000019757	POLR1B	76	97.270	Rhinopithecus_bieti
ENSEEUG00000004559	-	73	61.667	YPR010C	RPA135	69	61.667	Saccharomyces_cerevisiae
ENSEEUG00000004559	-	80	96.587	ENSSBOG00000024562	POLR1B	76	96.587	Saimiri_boliviensis_boliviensis
ENSEEUG00000004559	-	78	86.986	ENSSFOG00015004632	polr1b	74	86.986	Scleropages_formosus
ENSEEUG00000004559	-	80	88.014	ENSSMAG00000013682	polr1b	76	88.014	Scophthalmus_maximus
ENSEEUG00000004559	-	80	88.014	ENSSDUG00000019471	polr1b	76	88.014	Seriola_dumerili
ENSEEUG00000004559	-	66	91.781	ENSSPUG00000014298	POLR1B	77	91.781	Sphenodon_punctatus
ENSEEUG00000004559	-	80	88.356	ENSSPAG00000006345	polr1b	76	88.356	Stegastes_partitus
ENSEEUG00000004559	-	80	94.881	ENSSSCG00000008098	POLR1B	75	94.881	Sus_scrofa
ENSEEUG00000004559	-	76	77.055	ENSTGUG00000005237	POLR1B	79	77.397	Taeniopygia_guttata
ENSEEUG00000004559	-	80	86.644	ENSTRUG00000006581	polr1b	76	86.644	Takifugu_rubripes
ENSEEUG00000004559	-	80	88.014	ENSTNIG00000002722	polr1b	76	88.014	Tetraodon_nigroviridis
ENSEEUG00000004559	-	80	95.904	ENSTTRG00000010988	POLR1B	76	95.904	Tursiops_truncatus
ENSEEUG00000004559	-	80	95.904	ENSUAMG00000022527	-	79	95.904	Ursus_americanus
ENSEEUG00000004559	-	80	95.904	ENSUMAG00000008619	POLR1B	80	95.904	Ursus_maritimus
ENSEEUG00000004559	-	69	94.881	ENSVPAG00000011111	POLR1B	65	94.881	Vicugna_pacos
ENSEEUG00000004559	-	80	96.587	ENSVVUG00000028670	POLR1B	79	96.587	Vulpes_vulpes
ENSEEUG00000004559	-	80	90.068	ENSXETG00000013749	polr1b	76	90.068	Xenopus_tropicalis
ENSEEUG00000004559	-	80	88.699	ENSXCOG00000006080	polr1b	76	88.699	Xiphophorus_couchianus
ENSEEUG00000004559	-	80	88.356	ENSXMAG00000007723	polr1b	76	88.356	Xiphophorus_maculatus