EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000004747 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 2601 bases
Position: chrscaffold_207734:1545-4145
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000004306	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000004727	PABPN1L-201	711	-	ENSEEUP00000004306	236 (aa)	-	UPI0000F60F59

Gene Model

Click here to download ENSEEUG00000004747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000004747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000004747	PABPN1L	59	53.793	ENSEEUG00000012973	-	60	47.486

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000004747	PABPN1L	100	57.914	ENSG00000205022	PABPN1L	100	60.215	Homo_sapiens
ENSEEUG00000004747	PABPN1L	59	56.338	ENSACIG00000021400	PABPN1L	79	56.338	Amphilophus_citrinellus
ENSEEUG00000004747	PABPN1L	69	56.044	ENSACAG00000013250	PABPN1L	99	56.044	Anolis_carolinensis
ENSEEUG00000004747	PABPN1L	100	56.364	ENSANAG00000038178	PABPN1L	100	57.091	Aotus_nancymaae
ENSEEUG00000004747	PABPN1L	54	50.331	ENSAMXG00000010873	PABPN1L	69	46.774	Astyanax_mexicanus
ENSEEUG00000004747	PABPN1L	69	66.871	ENSBTAG00000006727	-	99	66.871	Bos_taurus
ENSEEUG00000004747	PABPN1L	100	60.595	ENSBTAG00000023752	-	100	61.338	Bos_taurus
ENSEEUG00000004747	PABPN1L	100	56.159	ENSCJAG00000045284	PABPN1L	100	58.845	Callithrix_jacchus
ENSEEUG00000004747	PABPN1L	100	58.909	ENSCHIG00000013987	PABPN1L	100	58.909	Capra_hircus
ENSEEUG00000004747	PABPN1L	94	56.180	ENSCAPG00000007240	PABPN1L	100	56.180	Cavia_aperea
ENSEEUG00000004747	PABPN1L	100	57.875	ENSCPOG00000025951	PABPN1L	100	57.875	Cavia_porcellus
ENSEEUG00000004747	PABPN1L	100	56.204	ENSCCAG00000027631	PABPN1L	100	57.664	Cebus_capucinus
ENSEEUG00000004747	PABPN1L	100	58.545	ENSCATG00000031060	PABPN1L	100	60.000	Cercocebus_atys
ENSEEUG00000004747	PABPN1L	100	58.088	ENSCLAG00000000704	PABPN1L	100	58.088	Chinchilla_lanigera
ENSEEUG00000004747	PABPN1L	100	56.357	ENSCSAG00000002881	PABPN1L	100	56.357	Chlorocebus_sabaeus
ENSEEUG00000004747	PABPN1L	69	55.080	ENSCPBG00000023441	PABPN1L	54	60.119	Chrysemys_picta_bellii
ENSEEUG00000004747	PABPN1L	100	56.522	ENSCANG00000039336	PABPN1L	100	57.971	Colobus_angolensis_palliatus
ENSEEUG00000004747	PABPN1L	100	60.364	ENSCGRG00001013211	Pabpn1l	100	60.364	Cricetulus_griseus_chok1gshd
ENSEEUG00000004747	PABPN1L	100	60.364	ENSCGRG00000015868	Pabpn1l	100	60.364	Cricetulus_griseus_crigri
ENSEEUG00000004747	PABPN1L	100	52.727	ENSDNOG00000034677	PABPN1L	100	54.545	Dasypus_novemcinctus
ENSEEUG00000004747	PABPN1L	100	61.624	ENSEASG00005000777	PABPN1L	100	61.624	Equus_asinus_asinus
ENSEEUG00000004747	PABPN1L	100	61.624	ENSECAG00000000378	PABPN1L	100	61.624	Equus_caballus
ENSEEUG00000004747	PABPN1L	100	61.733	ENSFCAG00000010465	PABPN1L	100	61.733	Felis_catus
ENSEEUG00000004747	PABPN1L	81	55.440	ENSFALG00000003319	PABPN1L	81	55.440	Ficedula_albicollis
ENSEEUG00000004747	PABPN1L	100	56.985	ENSFDAG00000021067	PABPN1L	100	56.985	Fukomys_damarensis
ENSEEUG00000004747	PABPN1L	58	69.784	ENSGALG00000006242	PABPN1L	79	69.784	Gallus_gallus
ENSEEUG00000004747	PABPN1L	63	55.556	ENSGAGG00000010613	PABPN1L	59	55.556	Gopherus_agassizii
ENSEEUG00000004747	PABPN1L	100	58.182	ENSGGOG00000012670	PABPN1L	100	59.420	Gorilla_gorilla
ENSEEUG00000004747	PABPN1L	95	55.000	ENSHGLG00000014207	PABPN1L	100	56.154	Heterocephalus_glaber_female
ENSEEUG00000004747	PABPN1L	95	55.000	ENSHGLG00100005230	PABPN1L	100	56.154	Heterocephalus_glaber_male
ENSEEUG00000004747	PABPN1L	52	52.381	ENSIPUG00000023583	PABPN1L	91	49.451	Ictalurus_punctatus
ENSEEUG00000004747	PABPN1L	100	56.631	ENSSTOG00000020814	PABPN1L	100	56.631	Ictidomys_tridecemlineatus
ENSEEUG00000004747	PABPN1L	100	59.041	ENSJJAG00000006433	Pabpn1l	100	59.041	Jaculus_jaculus
ENSEEUG00000004747	PABPN1L	81	55.405	ENSLAFG00000025902	-	88	55.405	Loxodonta_africana
ENSEEUG00000004747	PABPN1L	100	58.545	ENSMFAG00000002924	PABPN1L	100	60.000	Macaca_fascicularis
ENSEEUG00000004747	PABPN1L	100	58.029	ENSMMUG00000012438	PABPN1L	100	59.489	Macaca_mulatta
ENSEEUG00000004747	PABPN1L	100	58.545	ENSMNEG00000044808	PABPN1L	100	60.000	Macaca_nemestrina
ENSEEUG00000004747	PABPN1L	100	58.182	ENSMLEG00000032667	PABPN1L	100	59.636	Mandrillus_leucophaeus
ENSEEUG00000004747	PABPN1L	100	59.851	ENSMAUG00000014032	Pabpn1l	100	60.223	Mesocricetus_auratus
ENSEEUG00000004747	PABPN1L	100	61.818	ENSMICG00000028179	PABPN1L	100	61.818	Microcebus_murinus
ENSEEUG00000004747	PABPN1L	100	58.672	ENSMOCG00000007955	Pabpn1l	100	58.672	Microtus_ochrogaster
ENSEEUG00000004747	PABPN1L	100	49.446	ENSMODG00000003873	-	100	49.815	Monodelphis_domestica
ENSEEUG00000004747	PABPN1L	100	59.124	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	59.124	Mus_caroli
ENSEEUG00000004747	PABPN1L	100	58.759	ENSMUSG00000069867	Pabpn1l	100	58.759	Mus_musculus
ENSEEUG00000004747	PABPN1L	100	59.124	MGP_PahariEiJ_G0023268	Pabpn1l	100	59.124	Mus_pahari
ENSEEUG00000004747	PABPN1L	100	59.124	MGP_SPRETEiJ_G0032788	Pabpn1l	100	59.124	Mus_spretus
ENSEEUG00000004747	PABPN1L	95	45.522	ENSMLUG00000003228	PABPN1L	95	45.522	Myotis_lucifugus
ENSEEUG00000004747	PABPN1L	100	60.662	ENSNGAG00000023992	Pabpn1l	100	60.662	Nannospalax_galili
ENSEEUG00000004747	PABPN1L	53	58.140	ENSNBRG00000017078	PABPN1L	54	58.140	Neolamprologus_brichardi
ENSEEUG00000004747	PABPN1L	100	61.538	ENSOPRG00000005597	PABPN1L	100	61.538	Ochotona_princeps
ENSEEUG00000004747	PABPN1L	100	53.333	ENSODEG00000004649	PABPN1L	100	53.333	Octodon_degus
ENSEEUG00000004747	PABPN1L	100	54.753	ENSOANG00000013901	PABPN1L	100	55.894	Ornithorhynchus_anatinus
ENSEEUG00000004747	PABPN1L	53	60.305	ENSORLG00000026560	PABPN1L	50	60.305	Oryzias_latipes
ENSEEUG00000004747	PABPN1L	53	60.305	ENSORLG00020015068	PABPN1L	50	60.305	Oryzias_latipes_hni
ENSEEUG00000004747	PABPN1L	53	60.305	ENSORLG00015000397	PABPN1L	50	60.305	Oryzias_latipes_hsok
ENSEEUG00000004747	PABPN1L	89	42.083	ENSOMEG00000017896	PABPN1L	64	42.083	Oryzias_melastigma
ENSEEUG00000004747	PABPN1L	100	59.124	ENSOGAG00000000433	PABPN1L	100	60.584	Otolemur_garnettii
ENSEEUG00000004747	PABPN1L	100	57.285	ENSOARG00000013682	PABPN1L	100	57.616	Ovis_aries
ENSEEUG00000004747	PABPN1L	100	57.914	ENSPPAG00000028866	PABPN1L	100	59.140	Pan_paniscus
ENSEEUG00000004747	PABPN1L	100	61.733	ENSPPRG00000015106	PABPN1L	100	61.733	Panthera_pardus
ENSEEUG00000004747	PABPN1L	92	62.551	ENSPTIG00000015606	PABPN1L	100	62.551	Panthera_tigris_altaica
ENSEEUG00000004747	PABPN1L	100	57.914	ENSPTRG00000031120	PABPN1L	100	59.140	Pan_troglodytes
ENSEEUG00000004747	PABPN1L	100	57.818	ENSPANG00000026039	PABPN1L	100	59.273	Papio_anubis
ENSEEUG00000004747	PABPN1L	68	54.211	ENSPSIG00000003404	PABPN1L	100	56.316	Pelodiscus_sinensis
ENSEEUG00000004747	PABPN1L	100	60.075	ENSPEMG00000016624	Pabpn1l	100	60.075	Peromyscus_maniculatus_bairdii
ENSEEUG00000004747	PABPN1L	60	63.636	ENSPCIG00000007038	-	99	63.636	Phascolarctos_cinereus
ENSEEUG00000004747	PABPN1L	100	56.835	ENSPPYG00000007655	PABPN1L	100	58.781	Pongo_abelii
ENSEEUG00000004747	PABPN1L	100	59.273	ENSPCOG00000024077	PABPN1L	100	60.364	Propithecus_coquereli
ENSEEUG00000004747	PABPN1L	100	61.429	ENSPVAG00000002716	PABPN1L	100	62.857	Pteropus_vampyrus
ENSEEUG00000004747	PABPN1L	100	59.259	ENSRNOG00000029558	Pabpn1l	100	59.259	Rattus_norvegicus
ENSEEUG00000004747	PABPN1L	100	58.909	ENSRBIG00000030740	PABPN1L	100	60.364	Rhinopithecus_bieti
ENSEEUG00000004747	PABPN1L	100	60.507	ENSRROG00000032240	-	100	61.232	Rhinopithecus_roxellana
ENSEEUG00000004747	PABPN1L	99	58.029	ENSRROG00000035483	-	99	59.489	Rhinopithecus_roxellana
ENSEEUG00000004747	PABPN1L	100	56.569	ENSSBOG00000018410	PABPN1L	100	58.029	Saimiri_boliviensis_boliviensis
ENSEEUG00000004747	PABPN1L	100	47.405	ENSSHAG00000010001	-	100	47.405	Sarcophilus_harrisii
ENSEEUG00000004747	PABPN1L	86	58.824	ENSSARG00000005178	-	95	58.824	Sorex_araneus
ENSEEUG00000004747	PABPN1L	68	58.791	ENSSPUG00000007031	PABPN1L	84	59.016	Sphenodon_punctatus
ENSEEUG00000004747	PABPN1L	100	63.433	ENSSSCG00000036367	PABPN1L	100	63.433	Sus_scrofa
ENSEEUG00000004747	PABPN1L	100	61.733	ENSTTRG00000004691	PABPN1L	100	61.733	Tursiops_truncatus