EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000004768 (Gene tree)
Gene ID: -
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 5077 bases
Position: chrGeneScaffold_3297:374-5450
Accession: 19440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000004320	SBDS	PF01172.18	3e-10	1	1
ENSEEUP00000004320	SBDS_C	PF09377.10	2.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000004742	SBDS-201	624	-	ENSEEUP00000004320	208 (aa)	-	UPI0000F61064

Gene Model

Click here to download ENSEEUG00000004768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000004768's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000004768	SBDS	100	76.442	ENSG00000126524	SBDS	83	76.442	Homo_sapiens
ENSEEUG00000004768	SBDS	100	63.462	ENSAPOG00000014285	sbds	84	63.462	Acanthochromis_polyacanthus
ENSEEUG00000004768	SBDS	100	75.481	ENSAMEG00000018167	SBDS	83	75.481	Ailuropoda_melanoleuca
ENSEEUG00000004768	SBDS	100	62.981	ENSACIG00000007308	sbds	83	62.981	Amphilophus_citrinellus
ENSEEUG00000004768	SBDS	100	63.462	ENSAOCG00000016770	sbds	84	63.462	Amphiprion_ocellaris
ENSEEUG00000004768	SBDS	100	63.462	ENSAPEG00000015897	sbds	84	63.462	Amphiprion_percula
ENSEEUG00000004768	SBDS	100	62.981	ENSATEG00000006901	sbds	84	62.981	Anabas_testudineus
ENSEEUG00000004768	SBDS	100	71.635	ENSANAG00000024342	-	87	71.635	Aotus_nancymaae
ENSEEUG00000004768	SBDS	59	95.902	ENSANAG00000037501	-	59	95.902	Aotus_nancymaae
ENSEEUG00000004768	SBDS	100	63.462	ENSACLG00000018750	sbds	84	63.462	Astatotilapia_calliptera
ENSEEUG00000004768	SBDS	100	66.346	ENSAMXG00000005361	sbds	83	66.346	Astyanax_mexicanus
ENSEEUG00000004768	SBDS	100	76.442	ENSBTAG00000004051	SBDS	83	76.442	Bos_taurus
ENSEEUG00000004768	SBDS	97	42.289	WBGene00021063	sbds-1	79	42.289	Caenorhabditis_elegans
ENSEEUG00000004768	SBDS	100	76.442	ENSCJAG00000041007	SBDS	83	76.442	Callithrix_jacchus
ENSEEUG00000004768	SBDS	100	73.810	ENSCAFG00000010797	SBDS	83	73.810	Canis_familiaris
ENSEEUG00000004768	SBDS	100	75.962	ENSCAFG00020005357	SBDS	83	75.962	Canis_lupus_dingo
ENSEEUG00000004768	SBDS	100	76.442	ENSCHIG00000026854	SBDS	83	76.442	Capra_hircus
ENSEEUG00000004768	SBDS	100	76.442	ENSTSYG00000033822	SBDS	83	76.442	Carlito_syrichta
ENSEEUG00000004768	SBDS	59	94.262	ENSCAPG00000006634	SBDS	74	94.262	Cavia_aperea
ENSEEUG00000004768	SBDS	100	75.481	ENSCPOG00000036143	SBDS	83	75.481	Cavia_porcellus
ENSEEUG00000004768	SBDS	100	75.962	ENSCCAG00000020671	SBDS	83	75.962	Cebus_capucinus
ENSEEUG00000004768	SBDS	100	76.442	ENSCATG00000039026	SBDS	83	76.442	Cercocebus_atys
ENSEEUG00000004768	SBDS	100	75.000	ENSCLAG00000005721	-	83	75.000	Chinchilla_lanigera
ENSEEUG00000004768	SBDS	99	55.024	ENSCLAG00000002113	-	80	55.024	Chinchilla_lanigera
ENSEEUG00000004768	SBDS	100	76.442	ENSCSAG00000018275	SBDS	83	76.442	Chlorocebus_sabaeus
ENSEEUG00000004768	SBDS	100	70.192	ENSCHOG00000003795	SBDS	83	70.192	Choloepus_hoffmanni
ENSEEUG00000004768	SBDS	100	69.712	ENSCPBG00000014893	SBDS	83	69.712	Chrysemys_picta_bellii
ENSEEUG00000004768	SBDS	100	53.110	ENSCSAVG00000011811	-	84	53.110	Ciona_savignyi
ENSEEUG00000004768	SBDS	100	75.962	ENSCANG00000032368	SBDS	83	75.962	Colobus_angolensis_palliatus
ENSEEUG00000004768	SBDS	59	93.443	ENSCGRG00001019886	Sbds	74	93.443	Cricetulus_griseus_chok1gshd
ENSEEUG00000004768	SBDS	59	93.443	ENSCGRG00000009211	Sbds	67	93.443	Cricetulus_griseus_crigri
ENSEEUG00000004768	SBDS	100	62.981	ENSCSEG00000005798	sbds	84	62.981	Cynoglossus_semilaevis
ENSEEUG00000004768	SBDS	95	62.944	ENSCVAG00000001053	sbds	84	61.538	Cyprinodon_variegatus
ENSEEUG00000004768	SBDS	100	64.423	ENSDARG00000027803	sbds	83	64.423	Danio_rerio
ENSEEUG00000004768	SBDS	100	75.962	ENSDNOG00000041174	SBDS	83	75.962	Dasypus_novemcinctus
ENSEEUG00000004768	SBDS	100	73.077	ENSDORG00000026218	Sbds	83	73.077	Dipodomys_ordii
ENSEEUG00000004768	SBDS	97	44.335	FBgn0035714	CG8549	72	45.856	Drosophila_melanogaster
ENSEEUG00000004768	SBDS	59	57.377	ENSEBUG00000015780	sbds	54	57.377	Eptatretus_burgeri
ENSEEUG00000004768	SBDS	100	75.962	ENSEASG00005008821	SBDS	83	75.962	Equus_asinus_asinus
ENSEEUG00000004768	SBDS	100	75.962	ENSECAG00000008202	SBDS	83	75.962	Equus_caballus
ENSEEUG00000004768	SBDS	100	62.981	ENSELUG00000008382	sbds	83	62.981	Esox_lucius
ENSEEUG00000004768	SBDS	100	75.962	ENSFCAG00000022142	SBDS	83	75.962	Felis_catus
ENSEEUG00000004768	SBDS	100	68.269	ENSFALG00000013808	SBDS	83	68.269	Ficedula_albicollis
ENSEEUG00000004768	SBDS	100	75.481	ENSFDAG00000018947	-	83	75.481	Fukomys_damarensis
ENSEEUG00000004768	SBDS	65	92.000	ENSFHEG00000000708	sbds	59	92.000	Fundulus_heteroclitus
ENSEEUG00000004768	SBDS	100	64.904	ENSGMOG00000018356	sbds	83	64.904	Gadus_morhua
ENSEEUG00000004768	SBDS	100	68.750	ENSGALG00000027989	SBDS	83	68.750	Gallus_gallus
ENSEEUG00000004768	SBDS	86	57.865	ENSGAFG00000014204	sbds	82	56.614	Gambusia_affinis
ENSEEUG00000004768	SBDS	100	63.942	ENSGACG00000012697	sbds	84	63.942	Gasterosteus_aculeatus
ENSEEUG00000004768	SBDS	59	88.525	ENSGAGG00000022402	SBDS	57	88.525	Gopherus_agassizii
ENSEEUG00000004768	SBDS	68	97.059	ENSGGOG00000040023	-	67	97.059	Gorilla_gorilla
ENSEEUG00000004768	SBDS	100	63.462	ENSHBUG00000002660	sbds	84	63.462	Haplochromis_burtoni
ENSEEUG00000004768	SBDS	100	74.038	ENSHGLG00000009671	SBDS	83	74.038	Heterocephalus_glaber_female
ENSEEUG00000004768	SBDS	100	74.038	ENSHGLG00100011332	SBDS	83	74.038	Heterocephalus_glaber_male
ENSEEUG00000004768	SBDS	100	63.942	ENSHCOG00000018606	sbds	84	63.942	Hippocampus_comes
ENSEEUG00000004768	SBDS	100	65.865	ENSIPUG00000006536	sbds	83	65.865	Ictalurus_punctatus
ENSEEUG00000004768	SBDS	50	45.714	ENSJJAG00000013791	-	100	45.714	Jaculus_jaculus
ENSEEUG00000004768	SBDS	100	71.635	ENSJJAG00000012033	-	83	71.635	Jaculus_jaculus
ENSEEUG00000004768	SBDS	100	62.981	ENSKMAG00000018542	sbds	84	62.981	Kryptolebias_marmoratus
ENSEEUG00000004768	SBDS	100	61.058	ENSLBEG00000016687	sbds	84	61.058	Labrus_bergylta
ENSEEUG00000004768	SBDS	100	64.904	ENSLACG00000018916	SBDS	83	64.904	Latimeria_chalumnae
ENSEEUG00000004768	SBDS	100	68.269	ENSLOCG00000004073	sbds	83	68.269	Lepisosteus_oculatus
ENSEEUG00000004768	SBDS	100	75.000	ENSLAFG00000008763	SBDS	83	75.000	Loxodonta_africana
ENSEEUG00000004768	SBDS	100	76.442	ENSMFAG00000032620	SBDS	83	76.442	Macaca_fascicularis
ENSEEUG00000004768	SBDS	100	76.442	ENSMMUG00000045653	SBDS	83	76.442	Macaca_mulatta
ENSEEUG00000004768	SBDS	100	76.442	ENSMNEG00000031523	SBDS	83	76.442	Macaca_nemestrina
ENSEEUG00000004768	SBDS	74	66.879	ENSMLEG00000036826	SBDS	75	66.879	Mandrillus_leucophaeus
ENSEEUG00000004768	SBDS	100	62.981	ENSMAMG00000016062	sbds	84	62.981	Mastacembelus_armatus
ENSEEUG00000004768	SBDS	100	63.462	ENSMZEG00005024385	sbds	84	63.462	Maylandia_zebra
ENSEEUG00000004768	SBDS	100	68.750	ENSMGAG00000002119	SBDS	83	68.750	Meleagris_gallopavo
ENSEEUG00000004768	SBDS	99	57.971	ENSMAUG00000022214	-	80	57.971	Mesocricetus_auratus
ENSEEUG00000004768	SBDS	100	75.962	ENSMICG00000014366	SBDS	83	75.962	Microcebus_murinus
ENSEEUG00000004768	SBDS	100	74.519	ENSMOCG00000011739	Sbds	83	74.519	Microtus_ochrogaster
ENSEEUG00000004768	SBDS	92	64.062	ENSMMOG00000005061	sbds	73	62.842	Mola_mola
ENSEEUG00000004768	SBDS	100	74.519	ENSMODG00000006644	SBDS	83	74.519	Monodelphis_domestica
ENSEEUG00000004768	SBDS	100	62.981	ENSMALG00000010219	sbds	84	62.981	Monopterus_albus
ENSEEUG00000004768	SBDS	100	74.519	MGP_CAROLIEiJ_G0027800	Sbds	100	95.349	Mus_caroli
ENSEEUG00000004768	SBDS	100	74.519	ENSMUSG00000025337	Sbds	100	95.349	Mus_musculus
ENSEEUG00000004768	SBDS	100	74.519	MGP_PahariEiJ_G0024384	Sbds	100	95.349	Mus_pahari
ENSEEUG00000004768	SBDS	100	74.519	MGP_SPRETEiJ_G0028798	Sbds	100	95.349	Mus_spretus
ENSEEUG00000004768	SBDS	59	93.443	ENSMPUG00000016192	SBDS	70	93.443	Mustela_putorius_furo
ENSEEUG00000004768	SBDS	59	94.262	ENSMLUG00000013575	SBDS	67	94.262	Myotis_lucifugus
ENSEEUG00000004768	SBDS	100	75.000	ENSNGAG00000012093	Sbds	83	75.000	Nannospalax_galili
ENSEEUG00000004768	SBDS	100	63.462	ENSNBRG00000017027	sbds	84	63.462	Neolamprologus_brichardi
ENSEEUG00000004768	SBDS	100	76.442	ENSNLEG00000013288	SBDS	83	76.442	Nomascus_leucogenys
ENSEEUG00000004768	SBDS	100	74.519	ENSOPRG00000008721	SBDS	83	74.519	Ochotona_princeps
ENSEEUG00000004768	SBDS	100	60.096	ENSODEG00000001116	-	82	60.096	Octodon_degus
ENSEEUG00000004768	SBDS	100	66.827	ENSODEG00000019253	-	70	66.827	Octodon_degus
ENSEEUG00000004768	SBDS	100	58.654	ENSODEG00000000137	-	69	62.981	Octodon_degus
ENSEEUG00000004768	SBDS	100	62.981	ENSONIG00000005874	sbds	84	62.981	Oreochromis_niloticus
ENSEEUG00000004768	SBDS	59	90.164	ENSOANG00000007674	-	59	90.164	Ornithorhynchus_anatinus
ENSEEUG00000004768	SBDS	100	75.481	ENSOCUG00000003170	SBDS	83	75.481	Oryctolagus_cuniculus
ENSEEUG00000004768	SBDS	95	63.452	ENSORLG00000023489	sbds	84	62.019	Oryzias_latipes
ENSEEUG00000004768	SBDS	95	62.944	ENSORLG00020019282	sbds	84	61.538	Oryzias_latipes_hni
ENSEEUG00000004768	SBDS	95	62.944	ENSORLG00015008005	sbds	84	61.538	Oryzias_latipes_hsok
ENSEEUG00000004768	SBDS	100	61.538	ENSOMEG00000022747	sbds	84	61.538	Oryzias_melastigma
ENSEEUG00000004768	SBDS	100	75.000	ENSOGAG00000009011	-	83	75.000	Otolemur_garnettii
ENSEEUG00000004768	SBDS	100	56.731	ENSOGAG00000015036	-	83	56.731	Otolemur_garnettii
ENSEEUG00000004768	SBDS	100	76.442	ENSOARG00000010609	SBDS	83	76.442	Ovis_aries
ENSEEUG00000004768	SBDS	100	76.442	ENSPPAG00000043889	-	83	76.442	Pan_paniscus
ENSEEUG00000004768	SBDS	100	75.962	ENSPPRG00000002307	SBDS	83	75.962	Panthera_pardus
ENSEEUG00000004768	SBDS	100	75.962	ENSPTIG00000021308	SBDS	83	75.962	Panthera_tigris_altaica
ENSEEUG00000004768	SBDS	100	69.231	ENSPTRG00000047744	-	81	69.231	Pan_troglodytes
ENSEEUG00000004768	SBDS	100	76.442	ENSPTRG00000048174	-	92	76.442	Pan_troglodytes
ENSEEUG00000004768	SBDS	100	76.442	ENSPTRG00000019254	SBDS	83	76.442	Pan_troglodytes
ENSEEUG00000004768	SBDS	100	69.231	ENSPTRG00000050835	-	81	69.231	Pan_troglodytes
ENSEEUG00000004768	SBDS	100	76.442	ENSPANG00000004078	SBDS	83	76.442	Papio_anubis
ENSEEUG00000004768	SBDS	100	65.385	ENSPKIG00000006489	sbds	83	65.385	Paramormyrops_kingsleyae
ENSEEUG00000004768	SBDS	59	89.344	ENSPSIG00000014603	SBDS	59	89.344	Pelodiscus_sinensis
ENSEEUG00000004768	SBDS	100	62.500	ENSPMGG00000004246	sbds	84	62.500	Periophthalmus_magnuspinnatus
ENSEEUG00000004768	SBDS	100	75.000	ENSPEMG00000008728	Sbds	83	75.000	Peromyscus_maniculatus_bairdii
ENSEEUG00000004768	SBDS	100	72.596	ENSPCIG00000029718	SBDS	83	72.596	Phascolarctos_cinereus
ENSEEUG00000004768	SBDS	95	61.929	ENSPFOG00000015837	sbds	84	60.577	Poecilia_formosa
ENSEEUG00000004768	SBDS	95	61.929	ENSPLAG00000003641	sbds	84	60.577	Poecilia_latipinna
ENSEEUG00000004768	SBDS	95	61.929	ENSPMEG00000019483	sbds	84	60.577	Poecilia_mexicana
ENSEEUG00000004768	SBDS	95	61.421	ENSPREG00000018758	sbds	84	60.096	Poecilia_reticulata
ENSEEUG00000004768	SBDS	100	76.442	ENSPPYG00000017513	SBDS	83	76.442	Pongo_abelii
ENSEEUG00000004768	SBDS	100	75.962	ENSPCOG00000021098	SBDS	83	75.962	Propithecus_coquereli
ENSEEUG00000004768	SBDS	100	75.481	ENSPVAG00000009369	SBDS	83	75.481	Pteropus_vampyrus
ENSEEUG00000004768	SBDS	100	63.462	ENSPNYG00000022403	sbds	84	63.462	Pundamilia_nyererei
ENSEEUG00000004768	SBDS	100	65.385	ENSPNAG00000001120	sbds	83	65.385	Pygocentrus_nattereri
ENSEEUG00000004768	SBDS	100	74.519	ENSRNOG00000000888	Sbds	83	74.519	Rattus_norvegicus
ENSEEUG00000004768	SBDS	100	76.442	ENSRBIG00000035557	SBDS	83	76.442	Rhinopithecus_bieti
ENSEEUG00000004768	SBDS	100	61.538	ENSRROG00000041986	-	85	59.615	Rhinopithecus_roxellana
ENSEEUG00000004768	SBDS	100	76.442	ENSRROG00000040842	-	83	76.442	Rhinopithecus_roxellana
ENSEEUG00000004768	SBDS	96	32.161	YLR022C	-	72	33.889	Saccharomyces_cerevisiae
ENSEEUG00000004768	SBDS	91	73.684	ENSSBOG00000022460	SBDS	82	73.684	Saimiri_boliviensis_boliviensis
ENSEEUG00000004768	SBDS	100	74.519	ENSSHAG00000010263	SBDS	83	74.519	Sarcophilus_harrisii
ENSEEUG00000004768	SBDS	100	66.346	ENSSFOG00015001108	sbds	83	66.346	Scleropages_formosus
ENSEEUG00000004768	SBDS	100	64.904	ENSSMAG00000020506	sbds	84	64.904	Scophthalmus_maximus
ENSEEUG00000004768	SBDS	100	62.981	ENSSDUG00000001528	sbds	84	62.981	Seriola_dumerili
ENSEEUG00000004768	SBDS	100	63.462	ENSSLDG00000003659	sbds	84	63.462	Seriola_lalandi_dorsalis
ENSEEUG00000004768	SBDS	74	69.935	ENSSARG00000013132	-	100	69.935	Sorex_araneus
ENSEEUG00000004768	SBDS	100	68.269	ENSSPUG00000002699	SBDS	83	68.269	Sphenodon_punctatus
ENSEEUG00000004768	SBDS	100	62.981	ENSSPAG00000016419	sbds	83	62.981	Stegastes_partitus
ENSEEUG00000004768	SBDS	100	75.962	ENSSSCG00000007732	SBDS	83	75.962	Sus_scrofa
ENSEEUG00000004768	SBDS	59	86.066	ENSTGUG00000003426	SBDS	73	86.066	Taeniopygia_guttata
ENSEEUG00000004768	SBDS	100	62.981	ENSTRUG00000021443	sbds	84	62.981	Takifugu_rubripes
ENSEEUG00000004768	SBDS	100	62.981	ENSTNIG00000019000	sbds	84	62.981	Tetraodon_nigroviridis
ENSEEUG00000004768	SBDS	100	61.538	ENSTBEG00000001178	SBDS	100	61.538	Tupaia_belangeri
ENSEEUG00000004768	SBDS	100	53.365	ENSTTRG00000003921	SBDS	83	53.365	Tursiops_truncatus
ENSEEUG00000004768	SBDS	100	75.481	ENSUAMG00000001326	SBDS	83	75.481	Ursus_americanus
ENSEEUG00000004768	SBDS	100	75.481	ENSUMAG00000015353	SBDS	83	75.481	Ursus_maritimus
ENSEEUG00000004768	SBDS	100	75.962	ENSVVUG00000016478	SBDS	83	75.962	Vulpes_vulpes
ENSEEUG00000004768	SBDS	100	67.308	ENSXETG00000010093	sbds	83	67.308	Xenopus_tropicalis
ENSEEUG00000004768	SBDS	97	63.184	ENSXCOG00000010639	sbds	89	63.184	Xiphophorus_couchianus
ENSEEUG00000004768	SBDS	97	63.184	ENSXMAG00000006065	sbds	89	63.184	Xiphophorus_maculatus