EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000004987 (Gene tree)
Gene ID: -
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 3709 bases
Position: chrscaffold_212601:1302-5010
Accession: 11158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000004528	LSM	PF01423.22	3.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000004962	SNRPD1-201	267	-	ENSEEUP00000004528	89 (aa)	-	UPI0000F60F80

Gene Model

Click here to download ENSEEUG00000004987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000004987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000004987	SNRPD1	75	33.803	ENSEEUG00000015518	SNRPD3	66	31.325
ENSEEUG00000004987	SNRPD1	80	30.986	ENSEEUG00000012032	LSM10	58	30.986
ENSEEUG00000004987	SNRPD1	71	100.000	ENSEEUG00000004545	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000004987	SNRPD1	100	100.000	ENSG00000167088	SNRPD1	75	100.000	Homo_sapiens
ENSEEUG00000004987	SNRPD1	100	100.000	ENSAMEG00000002576	SNRPD1	76	100.000	Ailuropoda_melanoleuca
ENSEEUG00000004987	SNRPD1	98	95.402	ENSACIG00000011263	snrpd1	78	95.402	Amphilophus_citrinellus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSAOCG00000007406	snrpd1	75	95.506	Amphiprion_ocellaris
ENSEEUG00000004987	SNRPD1	100	89.888	ENSAPEG00000014961	snrpd1	74	89.888	Amphiprion_percula
ENSEEUG00000004987	SNRPD1	98	95.402	ENSAPEG00000012539	SNRPD1	78	95.402	Amphiprion_percula
ENSEEUG00000004987	SNRPD1	100	95.506	ENSATEG00000014399	snrpd1	78	95.402	Anabas_testudineus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSAPLG00000012256	SNRPD1	75	100.000	Anas_platyrhynchos
ENSEEUG00000004987	SNRPD1	100	100.000	ENSACAG00000006364	SNRPD1	75	100.000	Anolis_carolinensis
ENSEEUG00000004987	SNRPD1	100	100.000	ENSANAG00000025641	SNRPD1	75	100.000	Aotus_nancymaae
ENSEEUG00000004987	SNRPD1	98	95.402	ENSACLG00000017406	snrpd1	78	95.402	Astatotilapia_calliptera
ENSEEUG00000004987	SNRPD1	100	96.629	ENSAMXG00000004589	snrpd1	75	96.629	Astyanax_mexicanus
ENSEEUG00000004987	SNRPD1	100	96.629	ENSBTAG00000047266	-	75	96.629	Bos_taurus
ENSEEUG00000004987	SNRPD1	100	97.753	ENSBTAG00000012376	-	66	97.753	Bos_taurus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSBTAG00000008292	SNRPD1	75	100.000	Bos_taurus
ENSEEUG00000004987	SNRPD1	100	97.753	ENSBTAG00000055316	-	77	97.753	Bos_taurus
ENSEEUG00000004987	SNRPD1	93	79.518	WBGene00004916	snr-3	71	75.281	Caenorhabditis_elegans
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCJAG00000042955	SNRPD1	75	100.000	Callithrix_jacchus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCAFG00000018247	SNRPD1	75	100.000	Canis_familiaris
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCAFG00020015914	SNRPD1	70	100.000	Canis_lupus_dingo
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCHIG00000005557	SNRPD1	75	100.000	Capra_hircus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSTSYG00000030028	SNRPD1	75	100.000	Carlito_syrichta
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCAPG00000008103	SNRPD1	77	100.000	Cavia_aperea
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCPOG00000004679	SNRPD1	77	100.000	Cavia_porcellus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCCAG00000032658	SNRPD1	75	100.000	Cebus_capucinus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSCCAG00000016652	-	75	95.506	Cebus_capucinus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSCCAG00000005390	-	75	95.506	Cebus_capucinus
ENSEEUG00000004987	SNRPD1	100	98.876	ENSCCAG00000020611	-	75	98.876	Cebus_capucinus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCATG00000039978	SNRPD1	75	100.000	Cercocebus_atys
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCLAG00000008691	SNRPD1	75	100.000	Chinchilla_lanigera
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCSAG00000017654	SNRPD1	75	100.000	Chlorocebus_sabaeus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCPBG00000023143	SNRPD1	76	100.000	Chrysemys_picta_bellii
ENSEEUG00000004987	SNRPD1	91	87.654	ENSCING00000024100	-	65	87.654	Ciona_intestinalis
ENSEEUG00000004987	SNRPD1	92	85.366	ENSCSAVG00000004578	-	66	85.366	Ciona_savignyi
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCGRG00001021055	-	75	100.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000004987	SNRPD1	99	75.000	ENSCGRG00001009945	-	77	75.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000004987	SNRPD1	99	75.000	ENSCGRG00000006224	-	77	75.000	Cricetulus_griseus_crigri
ENSEEUG00000004987	SNRPD1	100	100.000	ENSCGRG00000000490	-	75	100.000	Cricetulus_griseus_crigri
ENSEEUG00000004987	SNRPD1	100	94.382	ENSCSEG00000018141	snrpd1	75	94.382	Cynoglossus_semilaevis
ENSEEUG00000004987	SNRPD1	100	95.506	ENSCVAG00000000534	snrpd1	75	95.506	Cyprinodon_variegatus
ENSEEUG00000004987	SNRPD1	100	96.629	ENSDARG00000011648	snrpd1	94	96.629	Danio_rerio
ENSEEUG00000004987	SNRPD1	100	100.000	ENSDNOG00000040310	SNRPD1	75	100.000	Dasypus_novemcinctus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSDORG00000008349	Snrpd1	75	100.000	Dipodomys_ordii
ENSEEUG00000004987	SNRPD1	100	82.022	FBgn0261933	SmD1	72	82.022	Drosophila_melanogaster
ENSEEUG00000004987	SNRPD1	71	100.000	ENSETEG00000011689	SNRPD1	53	100.000	Echinops_telfairi
ENSEEUG00000004987	SNRPD1	100	91.011	ENSEBUG00000003170	snrpd1	88	91.011	Eptatretus_burgeri
ENSEEUG00000004987	SNRPD1	98	100.000	ENSEASG00005002433	SNRPD1	78	100.000	Equus_asinus_asinus
ENSEEUG00000004987	SNRPD1	98	100.000	ENSECAG00000014373	SNRPD1	78	100.000	Equus_caballus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSELUG00000000088	snrpd1	75	95.506	Esox_lucius
ENSEEUG00000004987	SNRPD1	100	100.000	ENSFCAG00000012352	SNRPD1	75	100.000	Felis_catus
ENSEEUG00000004987	SNRPD1	98	100.000	ENSFALG00000002646	SNRPD1	78	100.000	Ficedula_albicollis
ENSEEUG00000004987	SNRPD1	100	96.629	ENSGMOG00000015607	snrpd1	75	96.629	Gadus_morhua
ENSEEUG00000004987	SNRPD1	100	100.000	ENSGALG00000041334	SNRPD1	75	100.000	Gallus_gallus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSGAFG00000011171	snrpd1	75	95.506	Gambusia_affinis
ENSEEUG00000004987	SNRPD1	100	96.629	ENSGACG00000005201	SNRPD1	75	96.629	Gasterosteus_aculeatus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSGAGG00000011197	SNRPD1	75	100.000	Gopherus_agassizii
ENSEEUG00000004987	SNRPD1	100	100.000	ENSGGOG00000041053	SNRPD1	75	100.000	Gorilla_gorilla
ENSEEUG00000004987	SNRPD1	100	94.382	ENSGGOG00000026706	-	74	94.382	Gorilla_gorilla
ENSEEUG00000004987	SNRPD1	100	95.506	ENSHBUG00000003236	snrpd1	75	95.506	Haplochromis_burtoni
ENSEEUG00000004987	SNRPD1	100	100.000	ENSHGLG00000007152	SNRPD1	75	100.000	Heterocephalus_glaber_female
ENSEEUG00000004987	SNRPD1	100	100.000	ENSHGLG00100008618	SNRPD1	75	100.000	Heterocephalus_glaber_male
ENSEEUG00000004987	SNRPD1	100	95.506	ENSIPUG00000003576	snrpd1	75	95.506	Ictalurus_punctatus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSSTOG00000000485	SNRPD1	75	100.000	Ictidomys_tridecemlineatus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSJJAG00000017698	Snrpd1	75	100.000	Jaculus_jaculus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSKMAG00000005987	snrpd1	75	95.506	Kryptolebias_marmoratus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSLBEG00000003327	snrpd1	75	95.506	Labrus_bergylta
ENSEEUG00000004987	SNRPD1	100	100.000	ENSLACG00000001955	SNRPD1	75	100.000	Latimeria_chalumnae
ENSEEUG00000004987	SNRPD1	100	97.753	ENSLOCG00000002003	snrpd1	76	97.753	Lepisosteus_oculatus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSLAFG00000005819	SNRPD1	75	100.000	Loxodonta_africana
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMFAG00000042080	SNRPD1	75	100.000	Macaca_fascicularis
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMMUG00000003992	SNRPD1	76	100.000	Macaca_mulatta
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMNEG00000041296	SNRPD1	75	100.000	Macaca_nemestrina
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMLEG00000028659	SNRPD1	75	100.000	Mandrillus_leucophaeus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSMAMG00000012971	snrpd1	75	95.506	Mastacembelus_armatus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSMZEG00005004685	snrpd1	75	95.506	Maylandia_zebra
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMGAG00000011598	SNRPD1	74	100.000	Meleagris_gallopavo
ENSEEUG00000004987	SNRPD1	100	84.270	ENSMAUG00000016502	-	80	84.270	Mesocricetus_auratus
ENSEEUG00000004987	SNRPD1	100	84.270	ENSMAUG00000016467	-	80	84.270	Mesocricetus_auratus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMAUG00000006829	-	58	100.000	Mesocricetus_auratus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMICG00000044066	SNRPD1	75	100.000	Microcebus_murinus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMOCG00000017367	Snrpd1	75	100.000	Microtus_ochrogaster
ENSEEUG00000004987	SNRPD1	100	95.506	ENSMMOG00000019089	snrpd1	75	95.506	Mola_mola
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMODG00000021487	SNRPD1	77	100.000	Monodelphis_domestica
ENSEEUG00000004987	SNRPD1	100	95.506	ENSMALG00000014459	snrpd1	75	95.506	Monopterus_albus
ENSEEUG00000004987	SNRPD1	100	100.000	MGP_CAROLIEiJ_G0021994	Snrpd1	75	100.000	Mus_caroli
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMUSG00000002477	Snrpd1	75	100.000	Mus_musculus
ENSEEUG00000004987	SNRPD1	100	100.000	MGP_PahariEiJ_G0018731	Snrpd1	75	100.000	Mus_pahari
ENSEEUG00000004987	SNRPD1	100	100.000	MGP_SPRETEiJ_G0022910	Snrpd1	75	100.000	Mus_spretus
ENSEEUG00000004987	SNRPD1	100	98.876	ENSMPUG00000020041	-	75	98.876	Mustela_putorius_furo
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMPUG00000005567	-	76	100.000	Mustela_putorius_furo
ENSEEUG00000004987	SNRPD1	100	100.000	ENSMLUG00000009124	SNRPD1	69	100.000	Myotis_lucifugus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSNGAG00000023946	Snrpd1	75	100.000	Nannospalax_galili
ENSEEUG00000004987	SNRPD1	100	95.506	ENSNBRG00000012119	snrpd1	74	95.506	Neolamprologus_brichardi
ENSEEUG00000004987	SNRPD1	100	96.629	ENSNLEG00000031430	SNRPD1	74	96.629	Nomascus_leucogenys
ENSEEUG00000004987	SNRPD1	100	100.000	ENSODEG00000005764	SNRPD1	75	100.000	Octodon_degus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSONIG00000002486	snrpd1	75	95.506	Oreochromis_niloticus
ENSEEUG00000004987	SNRPD1	100	89.888	ENSOANG00000004638	-	75	89.888	Ornithorhynchus_anatinus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSOCUG00000023761	-	76	100.000	Oryctolagus_cuniculus
ENSEEUG00000004987	SNRPD1	100	98.876	ENSOCUG00000014399	-	75	98.876	Oryctolagus_cuniculus
ENSEEUG00000004987	SNRPD1	98	95.402	ENSORLG00000012516	snrpd1	78	95.402	Oryzias_latipes
ENSEEUG00000004987	SNRPD1	100	95.506	ENSORLG00020005743	snrpd1	75	95.506	Oryzias_latipes_hni
ENSEEUG00000004987	SNRPD1	100	95.506	ENSORLG00015013402	snrpd1	75	95.506	Oryzias_latipes_hsok
ENSEEUG00000004987	SNRPD1	100	95.506	ENSOMEG00000011571	snrpd1	75	95.506	Oryzias_melastigma
ENSEEUG00000004987	SNRPD1	100	100.000	ENSOGAG00000007833	SNRPD1	75	100.000	Otolemur_garnettii
ENSEEUG00000004987	SNRPD1	100	100.000	ENSOARG00000003413	-	67	100.000	Ovis_aries
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPPAG00000042593	SNRPD1	75	100.000	Pan_paniscus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPPRG00000002399	SNRPD1	75	100.000	Panthera_pardus
ENSEEUG00000004987	SNRPD1	100	66.292	ENSPPRG00000005009	-	67	66.292	Panthera_pardus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPTIG00000013206	SNRPD1	78	100.000	Panthera_tigris_altaica
ENSEEUG00000004987	SNRPD1	100	93.258	ENSPTRG00000050159	-	76	93.258	Pan_troglodytes
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPTRG00000009909	SNRPD1	75	100.000	Pan_troglodytes
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPANG00000023478	SNRPD1	75	100.000	Papio_anubis
ENSEEUG00000004987	SNRPD1	98	95.402	ENSPKIG00000021610	snrpd1	78	95.402	Paramormyrops_kingsleyae
ENSEEUG00000004987	SNRPD1	100	96.629	ENSPKIG00000003985	SNRPD1	75	96.629	Paramormyrops_kingsleyae
ENSEEUG00000004987	SNRPD1	100	95.506	ENSPMGG00000001862	snrpd1	75	95.506	Periophthalmus_magnuspinnatus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPEMG00000014773	-	75	100.000	Peromyscus_maniculatus_bairdii
ENSEEUG00000004987	SNRPD1	100	83.516	ENSPMAG00000003938	-	75	83.516	Petromyzon_marinus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPCIG00000020320	SNRPD1	78	100.000	Phascolarctos_cinereus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSPFOG00000012448	SNRPD1	79	95.506	Poecilia_formosa
ENSEEUG00000004987	SNRPD1	100	95.506	ENSPLAG00000006738	snrpd1	79	95.506	Poecilia_latipinna
ENSEEUG00000004987	SNRPD1	100	95.506	ENSPMEG00000021942	snrpd1	79	95.506	Poecilia_mexicana
ENSEEUG00000004987	SNRPD1	100	95.506	ENSPREG00000007094	snrpd1	75	95.506	Poecilia_reticulata
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPPYG00000025874	SNRPD1	75	100.000	Pongo_abelii
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPCOG00000013327	SNRPD1	75	100.000	Propithecus_coquereli
ENSEEUG00000004987	SNRPD1	100	100.000	ENSPVAG00000005511	SNRPD1	60	100.000	Pteropus_vampyrus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSPNAG00000017824	snrpd1	75	95.506	Pygocentrus_nattereri
ENSEEUG00000004987	SNRPD1	100	100.000	ENSRNOG00000013714	Snrpd1	75	100.000	Rattus_norvegicus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSRBIG00000022996	SNRPD1	75	100.000	Rhinopithecus_bieti
ENSEEUG00000004987	SNRPD1	100	100.000	ENSRROG00000027640	SNRPD1	75	100.000	Rhinopithecus_roxellana
ENSEEUG00000004987	SNRPD1	100	100.000	ENSSBOG00000020998	SNRPD1	75	100.000	Saimiri_boliviensis_boliviensis
ENSEEUG00000004987	SNRPD1	100	100.000	ENSSHAG00000011791	SNRPD1	75	100.000	Sarcophilus_harrisii
ENSEEUG00000004987	SNRPD1	100	94.382	ENSSFOG00015022253	-	75	94.382	Scleropages_formosus
ENSEEUG00000004987	SNRPD1	100	94.382	ENSSFOG00015008809	-	75	94.382	Scleropages_formosus
ENSEEUG00000004987	SNRPD1	100	94.382	ENSSMAG00000008765	snrpd1	78	94.253	Scophthalmus_maximus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSSDUG00000010521	snrpd1	75	95.506	Seriola_dumerili
ENSEEUG00000004987	SNRPD1	100	95.506	ENSSLDG00000011858	snrpd1	75	95.506	Seriola_lalandi_dorsalis
ENSEEUG00000004987	SNRPD1	75	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSSPUG00000002824	SNRPD1	75	100.000	Sphenodon_punctatus
ENSEEUG00000004987	SNRPD1	98	95.402	ENSSPAG00000015229	snrpd1	78	95.402	Stegastes_partitus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSSSCG00000003701	SNRPD1	78	100.000	Sus_scrofa
ENSEEUG00000004987	SNRPD1	100	100.000	ENSTGUG00000005095	SNRPD1	75	100.000	Taeniopygia_guttata
ENSEEUG00000004987	SNRPD1	98	95.402	ENSTRUG00000008977	snrpd1	78	95.402	Takifugu_rubripes
ENSEEUG00000004987	SNRPD1	88	89.744	ENSTNIG00000001224	snrpd1	75	89.744	Tetraodon_nigroviridis
ENSEEUG00000004987	SNRPD1	71	100.000	ENSTBEG00000013776	SNRPD1	72	100.000	Tupaia_belangeri
ENSEEUG00000004987	SNRPD1	100	100.000	ENSTTRG00000002654	SNRPD1	77	100.000	Tursiops_truncatus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSUAMG00000013431	SNRPD1	94	100.000	Ursus_americanus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSUMAG00000019740	SNRPD1	75	100.000	Ursus_maritimus
ENSEEUG00000004987	SNRPD1	100	100.000	ENSVPAG00000010056	SNRPD1	60	100.000	Vicugna_pacos
ENSEEUG00000004987	SNRPD1	98	100.000	ENSVVUG00000004009	SNRPD1	78	100.000	Vulpes_vulpes
ENSEEUG00000004987	SNRPD1	100	97.753	ENSXETG00000027354	snrpd1	75	97.753	Xenopus_tropicalis
ENSEEUG00000004987	SNRPD1	100	95.506	ENSXCOG00000020108	snrpd1	75	95.506	Xiphophorus_couchianus
ENSEEUG00000004987	SNRPD1	100	95.506	ENSXMAG00000003368	snrpd1	75	95.506	Xiphophorus_maculatus