EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEEUG00000005628 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Erinaceus_europaeus
Status
putative
Strand
Minus strand
Length
117814 bases
Position
chrGeneScaffold_7500:6624-124437
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEEUP00000005124RRM_1PF00076.226.7e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEEUT00000005627RBMS1-2011221-ENSEEUP00000005124406 (aa)-UPI0000F6384F
Gene Model
Click here to download ENSEEUG00000005628's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000005628's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEEUG00000005628RBMS17370.192ENSEEUG00000014337RBMS37978.095
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEEUG00000005628RBMS17999.029ENSG00000153250RBMS17999.029Homo_sapiens
ENSEEUG00000005628RBMS16690.000ENSAPOG00000024437-6791.837Acanthochromis_polyacanthus
ENSEEUG00000005628RBMS15382.000ENSAPOG00000013761rbms1a6783.673Acanthochromis_polyacanthus
ENSEEUG00000005628RBMS17497.500ENSAMEG00000012661RBMS17797.500Ailuropoda_melanoleuca
ENSEEUG00000005628RBMS17579.070ENSACIG00000021498RBMS17679.070Amphilophus_citrinellus
ENSEEUG00000005628RBMS17387.013ENSAOCG00000014482-7487.013Amphiprion_ocellaris
ENSEEUG00000005628RBMS15382.000ENSAOCG00000010066rbms1a5483.673Amphiprion_ocellaris
ENSEEUG00000005628RBMS17387.013ENSAPEG00000018371-7487.013Amphiprion_percula
ENSEEUG00000005628RBMS15382.000ENSAPEG00000023563rbms1a5483.673Amphiprion_percula
ENSEEUG00000005628RBMS17473.494ENSATEG00000018573RBMS16793.878Anabas_testudineus
ENSEEUG00000005628RBMS15382.000ENSATEG00000015450rbms1a5483.673Anabas_testudineus
ENSEEUG00000005628RBMS17696.629ENSAPLG00000007282RBMS17995.789Anas_platyrhynchos
ENSEEUG00000005628RBMS17391.358ENSACAG00000011984RBMS16282.716Anolis_carolinensis
ENSEEUG00000005628RBMS15476.712ENSANAG00000024424RBMS16876.712Aotus_nancymaae
ENSEEUG00000005628RBMS17479.012ENSACLG00000013048RBMS17386.301Astatotilapia_calliptera
ENSEEUG00000005628RBMS16580.000ENSACLG00000021512rbms1a6781.633Astatotilapia_calliptera
ENSEEUG00000005628RBMS17185.915ENSAMXG00000009969RBMS17193.878Astyanax_mexicanus
ENSEEUG00000005628RBMS16693.878ENSAMXG00000002146rbms1a6693.878Astyanax_mexicanus
ENSEEUG00000005628RBMS17398.734ENSBTAG00000005180RBMS17498.734Bos_taurus
ENSEEUG00000005628RBMS17291.781ENSCJAG00000012871-7791.781Callithrix_jacchus
ENSEEUG00000005628RBMS17093.939ENSCJAG00000022465-7691.139Callithrix_jacchus
ENSEEUG00000005628RBMS17999.029ENSCJAG00000014861-7999.029Callithrix_jacchus
ENSEEUG00000005628RBMS17496.296ENSCAFG00000009922RBMS17496.296Canis_familiaris
ENSEEUG00000005628RBMS17999.029ENSCAFG00020006120RBMS17999.029Canis_lupus_dingo
ENSEEUG00000005628RBMS179100.000ENSCHIG00000023380RBMS179100.000Capra_hircus
ENSEEUG00000005628RBMS179100.000ENSTSYG00000005584RBMS179100.000Carlito_syrichta
ENSEEUG00000005628RBMS179100.000ENSCPOG00000012310RBMS179100.000Cavia_porcellus
ENSEEUG00000005628RBMS17999.029ENSCCAG00000033841RBMS17999.029Cebus_capucinus
ENSEEUG00000005628RBMS179100.000ENSCATG00000043032RBMS179100.000Cercocebus_atys
ENSEEUG00000005628RBMS179100.000ENSCLAG00000003031RBMS179100.000Chinchilla_lanigera
ENSEEUG00000005628RBMS179100.000ENSCSAG00000015687RBMS179100.000Chlorocebus_sabaeus
ENSEEUG00000005628RBMS17996.117ENSCPBG00000026455RBMS17996.117Chrysemys_picta_bellii
ENSEEUG00000005628RBMS179100.000ENSCANG00000042152RBMS179100.000Colobus_angolensis_palliatus
ENSEEUG00000005628RBMS179100.000ENSCGRG00001022833Rbms179100.000Cricetulus_griseus_chok1gshd
ENSEEUG00000005628RBMS179100.000ENSCGRG00000008824Rbms179100.000Cricetulus_griseus_crigri
ENSEEUG00000005628RBMS16582.000ENSCSEG00000000889rbms1a6783.673Cynoglossus_semilaevis
ENSEEUG00000005628RBMS17186.111ENSCSEG00000010652RBMS17189.796Cynoglossus_semilaevis
ENSEEUG00000005628RBMS17278.082ENSCVAG00000002027RBMS17389.796Cyprinodon_variegatus
ENSEEUG00000005628RBMS16582.000ENSCVAG00000014698rbms1a6783.673Cyprinodon_variegatus
ENSEEUG00000005628RBMS16693.878ENSDARG00000074023rbms1a6693.878Danio_rerio
ENSEEUG00000005628RBMS159100.000ENSDNOG00000040691RBMS162100.000Dasypus_novemcinctus
ENSEEUG00000005628RBMS17999.029ENSDORG00000007103Rbms17999.029Dipodomys_ordii
ENSEEUG00000005628RBMS167100.000ENSETEG00000012135RBMS171100.000Echinops_telfairi
ENSEEUG00000005628RBMS17496.296ENSEASG00005023132RBMS17496.296Equus_asinus_asinus
ENSEEUG00000005628RBMS179100.000ENSECAG00000019894RBMS179100.000Equus_caballus
ENSEEUG00000005628RBMS16593.878ENSELUG00000018923rbms1a7193.878Esox_lucius
ENSEEUG00000005628RBMS16882.759ENSELUG00000019328RBMS17382.759Esox_lucius
ENSEEUG00000005628RBMS179100.000ENSFCAG00000012524RBMS179100.000Felis_catus
ENSEEUG00000005628RBMS16697.959ENSFALG00000004440RBMS17297.959Ficedula_albicollis
ENSEEUG00000005628RBMS179100.000ENSFDAG00000015692RBMS179100.000Fukomys_damarensis
ENSEEUG00000005628RBMS15382.000ENSFHEG00000005662rbms1a5483.673Fundulus_heteroclitus
ENSEEUG00000005628RBMS16689.796ENSFHEG00000000720RBMS16889.796Fundulus_heteroclitus
ENSEEUG00000005628RBMS16285.714ENSGMOG00000000525rbms1a7585.714Gadus_morhua
ENSEEUG00000005628RBMS17396.203ENSGALG00000011132RBMS17496.203Gallus_gallus
ENSEEUG00000005628RBMS15382.000ENSGAFG00000011633rbms1a5783.673Gambusia_affinis
ENSEEUG00000005628RBMS17376.543ENSGAFG00000007708RBMS16789.796Gambusia_affinis
ENSEEUG00000005628RBMS16688.000ENSGACG00000005671RBMS16889.796Gasterosteus_aculeatus
ENSEEUG00000005628RBMS15770.769ENSGACG00000015174rbms1a6783.673Gasterosteus_aculeatus
ENSEEUG00000005628RBMS17995.146ENSGAGG00000007866RBMS17995.146Gopherus_agassizii
ENSEEUG00000005628RBMS17198.571ENSGGOG00000001264RBMS17798.571Gorilla_gorilla
ENSEEUG00000005628RBMS17396.203ENSGGOG00000043756-7496.203Gorilla_gorilla
ENSEEUG00000005628RBMS16781.013ENSHBUG00000004516RBMS16889.796Haplochromis_burtoni
ENSEEUG00000005628RBMS16580.000ENSHBUG00000004802rbms1a6781.633Haplochromis_burtoni
ENSEEUG00000005628RBMS17999.029ENSHGLG00000010387RBMS17999.029Heterocephalus_glaber_female
ENSEEUG00000005628RBMS17397.468ENSHGLG00100014105RBMS17497.468Heterocephalus_glaber_male
ENSEEUG00000005628RBMS17284.932ENSHCOG00000016668RBMS17384.932Hippocampus_comes
ENSEEUG00000005628RBMS15382.000ENSHCOG00000020097rbms1a5483.673Hippocampus_comes
ENSEEUG00000005628RBMS16693.878ENSIPUG00000010131RBMS16693.878Ictalurus_punctatus
ENSEEUG00000005628RBMS17284.932ENSIPUG00000014677RBMS17384.932Ictalurus_punctatus
ENSEEUG00000005628RBMS179100.000ENSSTOG00000012501RBMS179100.000Ictidomys_tridecemlineatus
ENSEEUG00000005628RBMS17999.029ENSJJAG00000016543Rbms17999.029Jaculus_jaculus
ENSEEUG00000005628RBMS15382.000ENSKMAG00000011839-5483.673Kryptolebias_marmoratus
ENSEEUG00000005628RBMS17284.932ENSKMAG00000013911RBMS17384.932Kryptolebias_marmoratus
ENSEEUG00000005628RBMS17286.667ENSLBEG00000005787RBMS17386.667Labrus_bergylta
ENSEEUG00000005628RBMS16582.000ENSLBEG00000025962rbms1a6783.673Labrus_bergylta
ENSEEUG00000005628RBMS17480.723ENSLACG00000004324RBMS17479.012Latimeria_chalumnae
ENSEEUG00000005628RBMS17290.411ENSLOCG00000008622rbms1a7390.411Lepisosteus_oculatus
ENSEEUG00000005628RBMS17398.734ENSLAFG00000017217RBMS17898.734Loxodonta_africana
ENSEEUG00000005628RBMS179100.000ENSMFAG00000000274RBMS179100.000Macaca_fascicularis
ENSEEUG00000005628RBMS179100.000ENSMMUG00000016825RBMS179100.000Macaca_mulatta
ENSEEUG00000005628RBMS179100.000ENSMNEG00000039425RBMS179100.000Macaca_nemestrina
ENSEEUG00000005628RBMS173100.000ENSMLEG00000031517RBMS178100.000Mandrillus_leucophaeus
ENSEEUG00000005628RBMS15384.000ENSMAMG00000005018rbms1a5585.714Mastacembelus_armatus
ENSEEUG00000005628RBMS16690.000ENSMAMG00000003159-6993.750Mastacembelus_armatus
ENSEEUG00000005628RBMS16088.000ENSMZEG00005007313RBMS16889.796Maylandia_zebra
ENSEEUG00000005628RBMS16580.000ENSMZEG00005005661rbms1a6781.633Maylandia_zebra
ENSEEUG00000005628RBMS16697.959ENSMGAG00000011054RBMS17297.959Meleagris_gallopavo
ENSEEUG00000005628RBMS179100.000ENSMAUG00000008550Rbms179100.000Mesocricetus_auratus
ENSEEUG00000005628RBMS179100.000ENSMICG00000008325RBMS179100.000Microcebus_murinus
ENSEEUG00000005628RBMS179100.000ENSMOCG00000022617Rbms179100.000Microtus_ochrogaster
ENSEEUG00000005628RBMS17383.951ENSMMOG00000003707RBMS17583.951Mola_mola
ENSEEUG00000005628RBMS17996.117ENSMODG00000005250RBMS17996.117Monodelphis_domestica
ENSEEUG00000005628RBMS16772.222ENSMALG00000015715-6793.878Monopterus_albus
ENSEEUG00000005628RBMS16582.000ENSMALG00000014235rbms1a6783.673Monopterus_albus
ENSEEUG00000005628RBMS17999.029MGP_CAROLIEiJ_G0023586Rbms17999.029Mus_caroli
ENSEEUG00000005628RBMS17999.029ENSMUSG00000026970Rbms17999.029Mus_musculus
ENSEEUG00000005628RBMS17998.058MGP_PahariEiJ_G0025037Rbms17998.058Mus_pahari
ENSEEUG00000005628RBMS17999.029MGP_SPRETEiJ_G0024508Rbms17999.029Mus_spretus
ENSEEUG00000005628RBMS167100.000ENSMPUG00000000539RBMS165100.000Mustela_putorius_furo
ENSEEUG00000005628RBMS16795.385ENSMLUG00000008762RBMS16495.385Myotis_lucifugus
ENSEEUG00000005628RBMS179100.000ENSNGAG00000013636Rbms179100.000Nannospalax_galili
ENSEEUG00000005628RBMS16688.000ENSNBRG00000015151RBMS17089.796Neolamprologus_brichardi
ENSEEUG00000005628RBMS17999.029ENSNLEG00000001667RBMS17999.029Nomascus_leucogenys
ENSEEUG00000005628RBMS173100.000ENSOPRG00000012431RBMS173100.000Ochotona_princeps
ENSEEUG00000005628RBMS179100.000ENSODEG00000013934RBMS179100.000Octodon_degus
ENSEEUG00000005628RBMS17480.247ENSONIG00000008934RBMS17387.671Oreochromis_niloticus
ENSEEUG00000005628RBMS16580.000ENSONIG00000003329rbms1a6681.633Oreochromis_niloticus
ENSEEUG00000005628RBMS17397.436ENSOANG00000006166RBMS17597.436Ornithorhynchus_anatinus
ENSEEUG00000005628RBMS17398.734ENSOCUG00000017365RBMS17384.043Oryctolagus_cuniculus
ENSEEUG00000005628RBMS16582.000ENSORLG00000003917rbms1a6783.673Oryzias_latipes
ENSEEUG00000005628RBMS16771.831ENSORLG00000016818RBMS16789.796Oryzias_latipes
ENSEEUG00000005628RBMS16582.000ENSORLG00020018663rbms1a6783.673Oryzias_latipes_hni
ENSEEUG00000005628RBMS16771.831ENSORLG00020022335RBMS16789.796Oryzias_latipes_hni
ENSEEUG00000005628RBMS16582.000ENSORLG00015016556rbms1a6783.673Oryzias_latipes_hsok
ENSEEUG00000005628RBMS16771.831ENSORLG00015018208RBMS16789.796Oryzias_latipes_hsok
ENSEEUG00000005628RBMS16868.000ENSOMEG00000002394RBMS17368.000Oryzias_melastigma
ENSEEUG00000005628RBMS171100.000ENSOGAG00000002900RBMS177100.000Otolemur_garnettii
ENSEEUG00000005628RBMS179100.000ENSOARG00000006870RBMS179100.000Ovis_aries
ENSEEUG00000005628RBMS17397.468ENSPPAG00000040083RBMS17897.468Pan_paniscus
ENSEEUG00000005628RBMS17294.521ENSPPAG00000036520-7694.521Pan_paniscus
ENSEEUG00000005628RBMS179100.000ENSPPRG00000005040RBMS179100.000Panthera_pardus
ENSEEUG00000005628RBMS173100.000ENSPTIG00000021240RBMS177100.000Panthera_tigris_altaica
ENSEEUG00000005628RBMS17999.029ENSPTRG00000052304RBMS17999.029Pan_troglodytes
ENSEEUG00000005628RBMS17493.976ENSPTRG00000039358-7892.771Pan_troglodytes
ENSEEUG00000005628RBMS179100.000ENSPANG00000001383RBMS179100.000Papio_anubis
ENSEEUG00000005628RBMS16694.000ENSPKIG00000012818rbms1a6795.918Paramormyrops_kingsleyae
ENSEEUG00000005628RBMS17981.905ENSPKIG00000001498rbms1a6793.878Paramormyrops_kingsleyae
ENSEEUG00000005628RBMS17996.117ENSPSIG00000010240RBMS17996.117Pelodiscus_sinensis
ENSEEUG00000005628RBMS16582.000ENSPMGG00000004341rbms1a6683.673Periophthalmus_magnuspinnatus
ENSEEUG00000005628RBMS16686.000ENSPMGG00000006310RBMS17187.755Periophthalmus_magnuspinnatus
ENSEEUG00000005628RBMS179100.000ENSPEMG00000009449Rbms179100.000Peromyscus_maniculatus_bairdii
ENSEEUG00000005628RBMS17996.117ENSPCIG00000018405RBMS17996.117Phascolarctos_cinereus
ENSEEUG00000005628RBMS15382.000ENSPFOG00000016116rbms1a5483.673Poecilia_formosa
ENSEEUG00000005628RBMS17286.301ENSPFOG00000017483RBMS17386.301Poecilia_formosa
ENSEEUG00000005628RBMS15382.000ENSPLAG00000013864rbms1a5483.673Poecilia_latipinna
ENSEEUG00000005628RBMS16689.796ENSPLAG00000000920RBMS16789.796Poecilia_latipinna
ENSEEUG00000005628RBMS17286.301ENSPMEG00000015838RBMS17386.301Poecilia_mexicana
ENSEEUG00000005628RBMS15382.000ENSPMEG00000016185rbms1a5483.673Poecilia_mexicana
ENSEEUG00000005628RBMS17284.932ENSPREG00000008146RBMS17384.932Poecilia_reticulata
ENSEEUG00000005628RBMS15382.000ENSPREG00000020161rbms1a5483.673Poecilia_reticulata
ENSEEUG00000005628RBMS167100.000ENSPPYG00000012879-65100.000Pongo_abelii
ENSEEUG00000005628RBMS179100.000ENSPCAG00000009673RBMS179100.000Procavia_capensis
ENSEEUG00000005628RBMS179100.000ENSPCOG00000027294RBMS179100.000Propithecus_coquereli
ENSEEUG00000005628RBMS159100.000ENSPVAG00000010429RBMS159100.000Pteropus_vampyrus
ENSEEUG00000005628RBMS17479.012ENSPNYG00000002643RBMS17386.301Pundamilia_nyererei
ENSEEUG00000005628RBMS17283.784ENSPNAG00000023479RBMS16693.878Pygocentrus_nattereri
ENSEEUG00000005628RBMS16693.878ENSPNAG00000010225rbms1a6793.878Pygocentrus_nattereri
ENSEEUG00000005628RBMS17999.029ENSRNOG00000008482Rbms17999.029Rattus_norvegicus
ENSEEUG00000005628RBMS179100.000ENSRBIG00000044262RBMS179100.000Rhinopithecus_bieti
ENSEEUG00000005628RBMS173100.000ENSRROG00000043108RBMS178100.000Rhinopithecus_roxellana
ENSEEUG00000005628RBMS17398.718ENSSBOG00000034705RBMS17898.718Saimiri_boliviensis_boliviensis
ENSEEUG00000005628RBMS17996.117ENSSHAG00000012271RBMS17996.117Sarcophilus_harrisii
ENSEEUG00000005628RBMS17980.769ENSSFOG00015022929rbms17287.671Scleropages_formosus
ENSEEUG00000005628RBMS16691.837ENSSFOG00015014493rbms1a7191.837Scleropages_formosus
ENSEEUG00000005628RBMS16688.000ENSSMAG00000012152RBMS16589.796Scophthalmus_maximus
ENSEEUG00000005628RBMS16582.000ENSSMAG00000012722rbms1a7183.673Scophthalmus_maximus
ENSEEUG00000005628RBMS17289.041ENSSDUG00000018803RBMS17389.041Seriola_dumerili
ENSEEUG00000005628RBMS16582.000ENSSDUG00000020602rbms1a7183.673Seriola_dumerili
ENSEEUG00000005628RBMS17289.041ENSSLDG00000016556RBMS17389.041Seriola_lalandi_dorsalis
ENSEEUG00000005628RBMS16582.000ENSSLDG00000009495rbms1a6783.673Seriola_lalandi_dorsalis
ENSEEUG00000005628RBMS157100.000ENSSARG00000011085RBMS157100.000Sorex_araneus
ENSEEUG00000005628RBMS166100.000ENSSPUG00000017163RBMS172100.000Sphenodon_punctatus
ENSEEUG00000005628RBMS17289.041ENSSPAG00000000059RBMS17389.041Stegastes_partitus
ENSEEUG00000005628RBMS15382.000ENSSPAG00000005371rbms1a5483.673Stegastes_partitus
ENSEEUG00000005628RBMS17399.029ENSSSCG00000015888RBMS17499.029Sus_scrofa
ENSEEUG00000005628RBMS17997.087ENSTGUG00000006606RBMS17997.087Taeniopygia_guttata
ENSEEUG00000005628RBMS16485.106ENSTRUG00000017155rbms1a6683.673Takifugu_rubripes
ENSEEUG00000005628RBMS16690.000ENSTRUG00000005466-7573.494Takifugu_rubripes
ENSEEUG00000005628RBMS16081.633ENSTNIG00000009477rbms1a7281.633Tetraodon_nigroviridis
ENSEEUG00000005628RBMS17277.027ENSTNIG00000016496RBMS17393.878Tetraodon_nigroviridis
ENSEEUG00000005628RBMS152100.000ENSTBEG00000016156RBMS155100.000Tupaia_belangeri
ENSEEUG00000005628RBMS17398.718ENSTTRG00000011058RBMS17898.718Tursiops_truncatus
ENSEEUG00000005628RBMS17999.029ENSUAMG00000022331RBMS17999.029Ursus_americanus
ENSEEUG00000005628RBMS17497.500ENSUMAG00000008605RBMS17797.500Ursus_maritimus
ENSEEUG00000005628RBMS17394.175ENSVPAG00000002716RBMS17894.175Vicugna_pacos
ENSEEUG00000005628RBMS171100.000ENSVVUG00000018682RBMS177100.000Vulpes_vulpes
ENSEEUG00000005628RBMS17390.000ENSXETG00000016204rbms17886.250Xenopus_tropicalis
ENSEEUG00000005628RBMS15382.000ENSXCOG00000001659rbms1a5283.673Xiphophorus_couchianus
ENSEEUG00000005628RBMS16687.755ENSXCOG00000000211RBMS17287.755Xiphophorus_couchianus
ENSEEUG00000005628RBMS17284.932ENSXMAG00000011405RBMS17189.796Xiphophorus_maculatus
ENSEEUG00000005628RBMS15382.000ENSXMAG00000001802rbms1a5483.673Xiphophorus_maculatus

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