EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000005647 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome complex component CSL4-like
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 17004 bases
Position: chrGeneScaffold_418:149352-166355
Accession: 103109206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005128	EXOSC1	PF10447.9	2.7e-15	1	1
ENSEEUP00000005128	ECR1_N	PF14382.6	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000005631	EXOSC1-201	588	XM_016186004	ENSEEUP00000005128	195 (aa)	XP_016041490	UPI0000F6415E

Gene Model

Click here to download ENSEEUG00000005647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000005647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000005647	EXOSC1	100	96.923	ENSG00000171311	EXOSC1	100	96.923	Homo_sapiens
ENSEEUG00000005647	EXOSC1	98	79.058	ENSAPOG00000007822	exosc1	98	79.058	Acanthochromis_polyacanthus
ENSEEUG00000005647	EXOSC1	100	97.949	ENSAMEG00000000129	EXOSC1	100	97.949	Ailuropoda_melanoleuca
ENSEEUG00000005647	EXOSC1	96	78.723	ENSACIG00000018956	exosc1	92	78.723	Amphilophus_citrinellus
ENSEEUG00000005647	EXOSC1	98	79.058	ENSAOCG00000010699	exosc1	98	79.058	Amphiprion_ocellaris
ENSEEUG00000005647	EXOSC1	92	69.832	ENSAPEG00000012690	exosc1	96	69.832	Amphiprion_percula
ENSEEUG00000005647	EXOSC1	98	78.534	ENSATEG00000018683	exosc1	98	78.534	Anabas_testudineus
ENSEEUG00000005647	EXOSC1	99	83.938	ENSACAG00000002101	EXOSC1	99	83.938	Anolis_carolinensis
ENSEEUG00000005647	EXOSC1	100	97.949	ENSANAG00000034669	EXOSC1	100	97.949	Aotus_nancymaae
ENSEEUG00000005647	EXOSC1	98	79.058	ENSACLG00000021243	exosc1	98	79.058	Astatotilapia_calliptera
ENSEEUG00000005647	EXOSC1	98	80.628	ENSAMXG00000011116	exosc1	98	80.628	Astyanax_mexicanus
ENSEEUG00000005647	EXOSC1	100	97.436	ENSBTAG00000012699	EXOSC1	100	97.436	Bos_taurus
ENSEEUG00000005647	EXOSC1	92	32.447	WBGene00012966	exos-1	90	32.447	Caenorhabditis_elegans
ENSEEUG00000005647	EXOSC1	100	97.436	ENSCJAG00000016586	EXOSC1	100	97.436	Callithrix_jacchus
ENSEEUG00000005647	EXOSC1	100	97.436	ENSCAFG00000009068	EXOSC1	94	97.436	Canis_familiaris
ENSEEUG00000005647	EXOSC1	100	97.436	ENSCAFG00020006002	EXOSC1	94	97.436	Canis_lupus_dingo
ENSEEUG00000005647	EXOSC1	100	97.436	ENSCHIG00000015253	EXOSC1	100	97.436	Capra_hircus
ENSEEUG00000005647	EXOSC1	100	96.923	ENSTSYG00000000760	EXOSC1	100	96.923	Carlito_syrichta
ENSEEUG00000005647	EXOSC1	100	97.436	ENSCPOG00000001173	EXOSC1	100	97.436	Cavia_porcellus
ENSEEUG00000005647	EXOSC1	100	56.345	ENSCCAG00000023986	EXOSC1	100	56.345	Cebus_capucinus
ENSEEUG00000005647	EXOSC1	100	96.923	ENSCATG00000034114	EXOSC1	100	96.923	Cercocebus_atys
ENSEEUG00000005647	EXOSC1	100	97.949	ENSCLAG00000002463	EXOSC1	100	97.949	Chinchilla_lanigera
ENSEEUG00000005647	EXOSC1	100	96.410	ENSCSAG00000005870	EXOSC1	100	96.410	Chlorocebus_sabaeus
ENSEEUG00000005647	EXOSC1	96	83.957	ENSCHOG00000006477	EXOSC1	100	83.957	Choloepus_hoffmanni
ENSEEUG00000005647	EXOSC1	54	81.132	ENSCPBG00000011949	EXOSC1	88	81.132	Chrysemys_picta_bellii
ENSEEUG00000005647	EXOSC1	95	56.150	ENSCING00000022734	-	89	56.150	Ciona_intestinalis
ENSEEUG00000005647	EXOSC1	95	57.754	ENSCSAVG00000010865	-	95	57.754	Ciona_savignyi
ENSEEUG00000005647	EXOSC1	100	96.923	ENSCANG00000034159	EXOSC1	100	96.923	Colobus_angolensis_palliatus
ENSEEUG00000005647	EXOSC1	100	96.410	ENSCGRG00001000335	Exosc1	100	96.410	Cricetulus_griseus_chok1gshd
ENSEEUG00000005647	EXOSC1	100	96.410	ENSCGRG00000011602	Exosc1	100	96.410	Cricetulus_griseus_crigri
ENSEEUG00000005647	EXOSC1	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSEEUG00000005647	EXOSC1	98	75.916	ENSCVAG00000016748	exosc1	98	75.916	Cyprinodon_variegatus
ENSEEUG00000005647	EXOSC1	98	79.581	ENSDARG00000059841	exosc1	98	79.581	Danio_rerio
ENSEEUG00000005647	EXOSC1	75	97.973	ENSDNOG00000007983	EXOSC1	100	97.973	Dasypus_novemcinctus
ENSEEUG00000005647	EXOSC1	100	96.923	ENSDORG00000016528	Exosc1	100	96.923	Dipodomys_ordii
ENSEEUG00000005647	EXOSC1	94	47.619	FBgn0032346	Csl4	92	47.619	Drosophila_melanogaster
ENSEEUG00000005647	EXOSC1	100	94.872	ENSETEG00000002469	-	100	94.872	Echinops_telfairi
ENSEEUG00000005647	EXOSC1	99	61.224	ENSEBUG00000008164	exosc1	98	61.224	Eptatretus_burgeri
ENSEEUG00000005647	EXOSC1	100	88.205	ENSEASG00005008684	EXOSC1	100	88.205	Equus_asinus_asinus
ENSEEUG00000005647	EXOSC1	61	78.992	ENSECAG00000010621	EXOSC1	71	78.992	Equus_caballus
ENSEEUG00000005647	EXOSC1	94	79.891	ENSELUG00000017369	exosc1	81	79.891	Esox_lucius
ENSEEUG00000005647	EXOSC1	100	97.949	ENSFCAG00000040563	EXOSC1	94	97.949	Felis_catus
ENSEEUG00000005647	EXOSC1	100	82.564	ENSFALG00000008450	EXOSC1	100	82.564	Ficedula_albicollis
ENSEEUG00000005647	EXOSC1	100	97.949	ENSFDAG00000000846	EXOSC1	100	97.949	Fukomys_damarensis
ENSEEUG00000005647	EXOSC1	98	75.916	ENSFHEG00000009154	exosc1	98	75.916	Fundulus_heteroclitus
ENSEEUG00000005647	EXOSC1	98	79.058	ENSGMOG00000008993	exosc1	98	79.058	Gadus_morhua
ENSEEUG00000005647	EXOSC1	100	72.308	ENSGALG00000039917	EXOSC1	100	85.616	Gallus_gallus
ENSEEUG00000005647	EXOSC1	98	75.916	ENSGAFG00000010265	exosc1	94	75.916	Gambusia_affinis
ENSEEUG00000005647	EXOSC1	98	79.058	ENSGACG00000018936	exosc1	98	79.058	Gasterosteus_aculeatus
ENSEEUG00000005647	EXOSC1	100	84.103	ENSGAGG00000019192	EXOSC1	100	84.103	Gopherus_agassizii
ENSEEUG00000005647	EXOSC1	100	84.615	ENSGGOG00000003099	EXOSC1	100	84.615	Gorilla_gorilla
ENSEEUG00000005647	EXOSC1	98	79.058	ENSHBUG00000017857	exosc1	98	79.058	Haplochromis_burtoni
ENSEEUG00000005647	EXOSC1	100	97.436	ENSHGLG00000016927	EXOSC1	100	97.436	Heterocephalus_glaber_female
ENSEEUG00000005647	EXOSC1	100	97.436	ENSHGLG00100012208	EXOSC1	100	97.436	Heterocephalus_glaber_male
ENSEEUG00000005647	EXOSC1	98	78.010	ENSHCOG00000019882	exosc1	98	78.010	Hippocampus_comes
ENSEEUG00000005647	EXOSC1	98	79.581	ENSIPUG00000007685	exosc1	98	79.581	Ictalurus_punctatus
ENSEEUG00000005647	EXOSC1	63	81.967	ENSSTOG00000029860	-	93	81.967	Ictidomys_tridecemlineatus
ENSEEUG00000005647	EXOSC1	100	97.949	ENSSTOG00000006615	EXOSC1	100	97.949	Ictidomys_tridecemlineatus
ENSEEUG00000005647	EXOSC1	100	96.923	ENSJJAG00000013311	Exosc1	100	96.923	Jaculus_jaculus
ENSEEUG00000005647	EXOSC1	98	77.604	ENSKMAG00000001202	exosc1	81	77.604	Kryptolebias_marmoratus
ENSEEUG00000005647	EXOSC1	98	78.534	ENSLBEG00000011448	exosc1	98	78.534	Labrus_bergylta
ENSEEUG00000005647	EXOSC1	98	58.081	ENSLOCG00000003776	exosc1	99	58.081	Lepisosteus_oculatus
ENSEEUG00000005647	EXOSC1	100	97.436	ENSLAFG00000015983	EXOSC1	100	97.436	Loxodonta_africana
ENSEEUG00000005647	EXOSC1	100	96.923	ENSMFAG00000001493	EXOSC1	100	96.923	Macaca_fascicularis
ENSEEUG00000005647	EXOSC1	100	96.923	ENSMMUG00000020028	EXOSC1	100	89.950	Macaca_mulatta
ENSEEUG00000005647	EXOSC1	100	96.923	ENSMNEG00000029816	EXOSC1	100	96.923	Macaca_nemestrina
ENSEEUG00000005647	EXOSC1	100	91.282	ENSMLEG00000027643	EXOSC1	100	91.282	Mandrillus_leucophaeus
ENSEEUG00000005647	EXOSC1	98	79.581	ENSMAMG00000012200	exosc1	98	79.581	Mastacembelus_armatus
ENSEEUG00000005647	EXOSC1	98	79.058	ENSMZEG00005007042	exosc1	98	79.058	Maylandia_zebra
ENSEEUG00000005647	EXOSC1	100	85.128	ENSMAUG00000020462	-	100	85.128	Mesocricetus_auratus
ENSEEUG00000005647	EXOSC1	100	97.436	ENSMICG00000007664	EXOSC1	92	97.436	Microcebus_murinus
ENSEEUG00000005647	EXOSC1	97	90.000	ENSMOCG00000017124	-	97	90.000	Microtus_ochrogaster
ENSEEUG00000005647	EXOSC1	100	96.410	ENSMOCG00000006004	-	100	96.410	Microtus_ochrogaster
ENSEEUG00000005647	EXOSC1	99	59.794	ENSMMOG00000021403	exosc1	99	59.794	Mola_mola
ENSEEUG00000005647	EXOSC1	100	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSEEUG00000005647	EXOSC1	94	79.891	ENSMALG00000007061	exosc1	92	79.891	Monopterus_albus
ENSEEUG00000005647	EXOSC1	100	95.897	MGP_CAROLIEiJ_G0022959	Exosc1	100	95.897	Mus_caroli
ENSEEUG00000005647	EXOSC1	100	95.385	ENSMUSG00000034321	Exosc1	100	95.385	Mus_musculus
ENSEEUG00000005647	EXOSC1	100	96.410	MGP_PahariEiJ_G0014449	Exosc1	100	96.410	Mus_pahari
ENSEEUG00000005647	EXOSC1	100	95.897	MGP_SPRETEiJ_G0023880	Exosc1	100	95.897	Mus_spretus
ENSEEUG00000005647	EXOSC1	100	97.949	ENSMPUG00000017044	EXOSC1	100	97.949	Mustela_putorius_furo
ENSEEUG00000005647	EXOSC1	100	97.436	ENSMLUG00000009228	EXOSC1	100	97.436	Myotis_lucifugus
ENSEEUG00000005647	EXOSC1	100	95.385	ENSNGAG00000022033	Exosc1	100	95.385	Nannospalax_galili
ENSEEUG00000005647	EXOSC1	98	59.686	ENSNBRG00000024007	exosc1	97	59.686	Neolamprologus_brichardi
ENSEEUG00000005647	EXOSC1	100	96.410	ENSNLEG00000013872	EXOSC1	100	96.410	Nomascus_leucogenys
ENSEEUG00000005647	EXOSC1	59	91.304	ENSMEUG00000002246	EXOSC1	100	91.304	Notamacropus_eugenii
ENSEEUG00000005647	EXOSC1	100	95.897	ENSOPRG00000005065	EXOSC1	100	95.897	Ochotona_princeps
ENSEEUG00000005647	EXOSC1	100	97.436	ENSODEG00000016709	EXOSC1	100	97.436	Octodon_degus
ENSEEUG00000005647	EXOSC1	98	79.058	ENSONIG00000017683	exosc1	98	79.058	Oreochromis_niloticus
ENSEEUG00000005647	EXOSC1	59	93.043	ENSOANG00000006563	EXOSC1	98	91.129	Ornithorhynchus_anatinus
ENSEEUG00000005647	EXOSC1	100	91.282	ENSOCUG00000026461	-	100	91.282	Oryctolagus_cuniculus
ENSEEUG00000005647	EXOSC1	100	96.429	ENSOCUG00000011898	-	100	96.429	Oryctolagus_cuniculus
ENSEEUG00000005647	EXOSC1	98	77.604	ENSORLG00000011595	exosc1	98	77.604	Oryzias_latipes
ENSEEUG00000005647	EXOSC1	98	77.604	ENSORLG00020005831	exosc1	98	77.604	Oryzias_latipes_hni
ENSEEUG00000005647	EXOSC1	98	77.604	ENSORLG00015004317	exosc1	98	77.604	Oryzias_latipes_hsok
ENSEEUG00000005647	EXOSC1	98	62.304	ENSOMEG00000013907	exosc1	98	62.304	Oryzias_melastigma
ENSEEUG00000005647	EXOSC1	100	96.923	ENSOGAG00000016259	EXOSC1	100	96.923	Otolemur_garnettii
ENSEEUG00000005647	EXOSC1	100	96.923	ENSOARG00000010136	EXOSC1	100	96.923	Ovis_aries
ENSEEUG00000005647	EXOSC1	100	90.863	ENSPPAG00000039842	EXOSC1	100	90.863	Pan_paniscus
ENSEEUG00000005647	EXOSC1	100	97.949	ENSPPRG00000023366	EXOSC1	100	97.949	Panthera_pardus
ENSEEUG00000005647	EXOSC1	100	97.949	ENSPTIG00000017701	EXOSC1	100	97.949	Panthera_tigris_altaica
ENSEEUG00000005647	EXOSC1	100	96.923	ENSPTRG00000002808	EXOSC1	100	96.923	Pan_troglodytes
ENSEEUG00000005647	EXOSC1	100	96.923	ENSPANG00000021324	EXOSC1	100	96.923	Papio_anubis
ENSEEUG00000005647	EXOSC1	98	80.628	ENSPKIG00000016037	exosc1	98	80.628	Paramormyrops_kingsleyae
ENSEEUG00000005647	EXOSC1	75	80.822	ENSPSIG00000013571	EXOSC1	98	80.328	Pelodiscus_sinensis
ENSEEUG00000005647	EXOSC1	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSEEUG00000005647	EXOSC1	100	96.410	ENSPEMG00000010710	-	100	96.410	Peromyscus_maniculatus_bairdii
ENSEEUG00000005647	EXOSC1	95	70.053	ENSPMAG00000000195	exosc1	95	70.053	Petromyzon_marinus
ENSEEUG00000005647	EXOSC1	100	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSEEUG00000005647	EXOSC1	98	75.393	ENSPFOG00000006755	exosc1	94	75.393	Poecilia_formosa
ENSEEUG00000005647	EXOSC1	98	75.393	ENSPLAG00000005880	exosc1	98	75.393	Poecilia_latipinna
ENSEEUG00000005647	EXOSC1	98	75.393	ENSPMEG00000015598	exosc1	94	75.393	Poecilia_mexicana
ENSEEUG00000005647	EXOSC1	98	64.583	ENSPREG00000000405	exosc1	93	64.583	Poecilia_reticulata
ENSEEUG00000005647	EXOSC1	100	96.410	ENSPPYG00000002531	EXOSC1	100	96.410	Pongo_abelii
ENSEEUG00000005647	EXOSC1	100	96.923	ENSPCAG00000009135	EXOSC1	100	96.923	Procavia_capensis
ENSEEUG00000005647	EXOSC1	100	91.282	ENSPCOG00000027539	EXOSC1	100	91.282	Propithecus_coquereli
ENSEEUG00000005647	EXOSC1	100	97.949	ENSPVAG00000003372	EXOSC1	100	97.949	Pteropus_vampyrus
ENSEEUG00000005647	EXOSC1	98	79.058	ENSPNYG00000021745	exosc1	98	79.058	Pundamilia_nyererei
ENSEEUG00000005647	EXOSC1	98	79.581	ENSPNAG00000001944	exosc1	98	79.581	Pygocentrus_nattereri
ENSEEUG00000005647	EXOSC1	100	96.410	ENSRNOG00000048708	Exosc1	100	96.410	Rattus_norvegicus
ENSEEUG00000005647	EXOSC1	100	96.923	ENSRBIG00000035618	EXOSC1	100	96.923	Rhinopithecus_bieti
ENSEEUG00000005647	EXOSC1	100	96.923	ENSRROG00000032589	EXOSC1	92	96.923	Rhinopithecus_roxellana
ENSEEUG00000005647	EXOSC1	100	97.949	ENSSBOG00000000359	EXOSC1	100	97.949	Saimiri_boliviensis_boliviensis
ENSEEUG00000005647	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSEEUG00000005647	EXOSC1	97	78.421	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSEEUG00000005647	EXOSC1	98	81.250	ENSSFOG00015009069	exosc1	99	81.250	Scleropages_formosus
ENSEEUG00000005647	EXOSC1	98	79.581	ENSSMAG00000003721	exosc1	98	79.581	Scophthalmus_maximus
ENSEEUG00000005647	EXOSC1	98	79.581	ENSSDUG00000002993	exosc1	98	79.581	Seriola_dumerili
ENSEEUG00000005647	EXOSC1	98	79.581	ENSSLDG00000025181	exosc1	98	79.581	Seriola_lalandi_dorsalis
ENSEEUG00000005647	EXOSC1	100	84.103	ENSSARG00000000162	EXOSC1	100	84.103	Sorex_araneus
ENSEEUG00000005647	EXOSC1	99	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSEEUG00000005647	EXOSC1	98	70.681	ENSSPAG00000016792	exosc1	82	70.681	Stegastes_partitus
ENSEEUG00000005647	EXOSC1	100	96.923	ENSSSCG00000010518	EXOSC1	91	96.923	Sus_scrofa
ENSEEUG00000005647	EXOSC1	98	80.729	ENSTGUG00000009692	EXOSC1	99	80.729	Taeniopygia_guttata
ENSEEUG00000005647	EXOSC1	97	73.545	ENSTRUG00000007706	exosc1	98	73.545	Takifugu_rubripes
ENSEEUG00000005647	EXOSC1	97	73.438	ENSTNIG00000014079	exosc1	97	73.438	Tetraodon_nigroviridis
ENSEEUG00000005647	EXOSC1	100	89.744	ENSTBEG00000006011	EXOSC1	100	89.744	Tupaia_belangeri
ENSEEUG00000005647	EXOSC1	94	97.283	ENSTTRG00000009887	EXOSC1	100	97.283	Tursiops_truncatus
ENSEEUG00000005647	EXOSC1	100	81.026	ENSUAMG00000010266	EXOSC1	100	81.026	Ursus_americanus
ENSEEUG00000005647	EXOSC1	100	81.026	ENSUMAG00000022002	EXOSC1	100	81.026	Ursus_maritimus
ENSEEUG00000005647	EXOSC1	100	97.436	ENSVVUG00000023192	EXOSC1	63	97.436	Vulpes_vulpes
ENSEEUG00000005647	EXOSC1	98	77.604	ENSXETG00000003434	exosc1	99	77.604	Xenopus_tropicalis
ENSEEUG00000005647	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSEEUG00000005647	EXOSC1	98	65.104	ENSXMAG00000023382	exosc1	93	65.104	Xiphophorus_maculatus