EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000005717 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 23648 bases
Position: chrGeneScaffold_4888:3471-27118
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005233	CAF1	PF04857.20	2.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000005744	-	1242	-	ENSEEUP00000005233	414 (aa)	-	UPI0000F61B5A

Gene Model

Click here to download ENSEEUG00000005717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000005717's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000005717	-	86	81.250	ENSG00000146453	PNLDC1	69	81.250	Homo_sapiens
ENSEEUG00000005717	-	86	87.500	ENSAMEG00000015371	PNLDC1	68	87.500	Ailuropoda_melanoleuca
ENSEEUG00000005717	-	85	56.250	ENSAPLG00000007014	PNLDC1	69	56.250	Anas_platyrhynchos
ENSEEUG00000005717	-	85	61.290	ENSACAG00000013667	PNLDC1	67	61.290	Anolis_carolinensis
ENSEEUG00000005717	-	86	84.375	ENSANAG00000034713	PNLDC1	70	84.375	Aotus_nancymaae
ENSEEUG00000005717	-	86	81.250	ENSBTAG00000015166	PNLDC1	68	81.250	Bos_taurus
ENSEEUG00000005717	-	86	84.375	ENSCJAG00000011865	PNLDC1	71	84.375	Callithrix_jacchus
ENSEEUG00000005717	-	86	87.500	ENSCAFG00000000740	PNLDC1	67	87.500	Canis_familiaris
ENSEEUG00000005717	-	86	87.500	ENSCAFG00020017742	PNLDC1	66	89.140	Canis_lupus_dingo
ENSEEUG00000005717	-	86	81.250	ENSCHIG00000003141	PNLDC1	69	81.250	Capra_hircus
ENSEEUG00000005717	-	86	78.125	ENSTSYG00000005606	PNLDC1	67	78.125	Carlito_syrichta
ENSEEUG00000005717	-	86	78.125	ENSCAPG00000011893	PNLDC1	66	78.125	Cavia_aperea
ENSEEUG00000005717	-	86	78.125	ENSCPOG00000019565	PNLDC1	67	78.125	Cavia_porcellus
ENSEEUG00000005717	-	86	87.500	ENSCCAG00000026232	PNLDC1	67	87.500	Cebus_capucinus
ENSEEUG00000005717	-	86	81.250	ENSCATG00000033196	PNLDC1	67	81.250	Cercocebus_atys
ENSEEUG00000005717	-	86	78.125	ENSCLAG00000003228	PNLDC1	67	78.125	Chinchilla_lanigera
ENSEEUG00000005717	-	86	84.375	ENSCSAG00000012478	PNLDC1	69	84.375	Chlorocebus_sabaeus
ENSEEUG00000005717	-	85	62.500	ENSCPBG00000004050	PNLDC1	70	62.500	Chrysemys_picta_bellii
ENSEEUG00000005717	-	86	81.250	ENSCANG00000043076	PNLDC1	69	81.250	Colobus_angolensis_palliatus
ENSEEUG00000005717	-	86	71.875	ENSCGRG00001007470	-	67	71.875	Cricetulus_griseus_chok1gshd
ENSEEUG00000005717	-	86	65.625	ENSCGRG00001011981	-	63	65.625	Cricetulus_griseus_chok1gshd
ENSEEUG00000005717	-	86	65.625	ENSCGRG00000003103	-	64	65.625	Cricetulus_griseus_crigri
ENSEEUG00000005717	-	86	71.875	ENSCGRG00000010221	-	67	71.875	Cricetulus_griseus_crigri
ENSEEUG00000005717	-	86	71.875	ENSDNOG00000013709	PNLDC1	67	71.875	Dasypus_novemcinctus
ENSEEUG00000005717	-	86	78.125	ENSDORG00000011517	Pnldc1	72	86.878	Dipodomys_ordii
ENSEEUG00000005717	-	86	78.125	ENSETEG00000007587	PNLDC1	72	78.125	Echinops_telfairi
ENSEEUG00000005717	-	86	81.250	ENSECAG00000012898	PNLDC1	67	81.250	Equus_caballus
ENSEEUG00000005717	-	86	81.250	ENSFCAG00000002848	PNLDC1	67	81.250	Felis_catus
ENSEEUG00000005717	-	84	65.517	ENSFALG00000012081	PNLDC1	70	65.517	Ficedula_albicollis
ENSEEUG00000005717	-	86	78.125	ENSFDAG00000021334	PNLDC1	67	78.125	Fukomys_damarensis
ENSEEUG00000005717	-	77	44.923	ENSGALG00000011624	PNLDC1	64	44.923	Gallus_gallus
ENSEEUG00000005717	-	85	64.516	ENSGAGG00000015276	PNLDC1	74	64.516	Gopherus_agassizii
ENSEEUG00000005717	-	86	78.125	ENSGGOG00000014077	PNLDC1	69	78.125	Gorilla_gorilla
ENSEEUG00000005717	-	86	81.250	ENSHGLG00000006889	PNLDC1	67	81.250	Heterocephalus_glaber_female
ENSEEUG00000005717	-	86	81.250	ENSHGLG00100018275	PNLDC1	67	81.250	Heterocephalus_glaber_male
ENSEEUG00000005717	-	86	84.375	ENSSTOG00000005595	PNLDC1	67	84.375	Ictidomys_tridecemlineatus
ENSEEUG00000005717	-	86	75.000	ENSJJAG00000009937	Pnldc1	67	75.000	Jaculus_jaculus
ENSEEUG00000005717	-	53	83.710	ENSLAFG00000030189	PNLDC1	65	83.710	Loxodonta_africana
ENSEEUG00000005717	-	86	81.250	ENSMFAG00000041296	PNLDC1	67	81.250	Macaca_fascicularis
ENSEEUG00000005717	-	86	81.250	ENSMMUG00000004181	PNLDC1	68	81.250	Macaca_mulatta
ENSEEUG00000005717	-	86	81.250	ENSMNEG00000034271	PNLDC1	67	81.250	Macaca_nemestrina
ENSEEUG00000005717	-	85	78.125	ENSMLEG00000044059	PNLDC1	66	78.125	Mandrillus_leucophaeus
ENSEEUG00000005717	-	77	46.154	ENSMGAG00000012470	PNLDC1	62	46.154	Meleagris_gallopavo
ENSEEUG00000005717	-	86	65.625	ENSMAUG00000012298	Pnldc1	64	65.625	Mesocricetus_auratus
ENSEEUG00000005717	-	86	84.375	ENSMICG00000008021	PNLDC1	67	84.375	Microcebus_murinus
ENSEEUG00000005717	-	86	75.000	ENSMOCG00000014287	Pnldc1	68	75.000	Microtus_ochrogaster
ENSEEUG00000005717	-	86	65.625	ENSMODG00000007420	PNLDC1	67	65.625	Monodelphis_domestica
ENSEEUG00000005717	-	86	75.000	MGP_CAROLIEiJ_G0021045	Pnldc1	67	75.000	Mus_caroli
ENSEEUG00000005717	-	86	75.000	ENSMUSG00000073460	Pnldc1	70	83.258	Mus_musculus
ENSEEUG00000005717	-	86	78.125	MGP_PahariEiJ_G0023361	Pnldc1	67	78.125	Mus_pahari
ENSEEUG00000005717	-	86	75.000	MGP_SPRETEiJ_G0021975	Pnldc1	67	75.000	Mus_spretus
ENSEEUG00000005717	-	86	84.375	ENSMPUG00000004920	PNLDC1	67	84.375	Mustela_putorius_furo
ENSEEUG00000005717	-	86	81.250	ENSMLUG00000000747	PNLDC1	67	81.250	Myotis_lucifugus
ENSEEUG00000005717	-	86	78.125	ENSNGAG00000017714	Pnldc1	67	78.125	Nannospalax_galili
ENSEEUG00000005717	-	86	78.125	ENSNLEG00000011282	PNLDC1	69	78.125	Nomascus_leucogenys
ENSEEUG00000005717	-	61	55.859	ENSMEUG00000014042	-	89	55.859	Notamacropus_eugenii
ENSEEUG00000005717	-	71	84.375	ENSOPRG00000003813	PNLDC1	56	84.375	Ochotona_princeps
ENSEEUG00000005717	-	86	81.250	ENSODEG00000008047	PNLDC1	67	81.250	Octodon_degus
ENSEEUG00000005717	-	84	68.966	ENSOANG00000012199	PNLDC1	69	68.966	Ornithorhynchus_anatinus
ENSEEUG00000005717	-	86	75.000	ENSOCUG00000013867	PNLDC1	67	75.000	Oryctolagus_cuniculus
ENSEEUG00000005717	-	86	84.375	ENSOGAG00000007331	PNLDC1	68	84.375	Otolemur_garnettii
ENSEEUG00000005717	-	86	78.125	ENSOARG00000004585	PNLDC1	67	78.125	Ovis_aries
ENSEEUG00000005717	-	86	81.250	ENSPPAG00000026651	PNLDC1	68	81.250	Pan_paniscus
ENSEEUG00000005717	-	86	81.250	ENSPPRG00000012854	PNLDC1	67	81.250	Panthera_pardus
ENSEEUG00000005717	-	86	81.250	ENSPTIG00000011501	PNLDC1	66	81.250	Panthera_tigris_altaica
ENSEEUG00000005717	-	86	81.250	ENSPTRG00000018762	PNLDC1	69	81.250	Pan_troglodytes
ENSEEUG00000005717	-	86	81.250	ENSPANG00000022009	PNLDC1	67	81.250	Papio_anubis
ENSEEUG00000005717	-	86	78.125	ENSPEMG00000016301	Pnldc1	67	78.125	Peromyscus_maniculatus_bairdii
ENSEEUG00000005717	-	86	65.625	ENSPCIG00000023412	PNLDC1	82	65.625	Phascolarctos_cinereus
ENSEEUG00000005717	-	86	75.000	ENSPCOG00000025722	PNLDC1	67	75.000	Propithecus_coquereli
ENSEEUG00000005717	-	86	78.125	ENSRNOG00000023140	Pnldc1	99	77.987	Rattus_norvegicus
ENSEEUG00000005717	-	86	81.250	ENSRBIG00000033806	PNLDC1	67	81.250	Rhinopithecus_bieti
ENSEEUG00000005717	-	86	81.250	ENSRROG00000043919	PNLDC1	69	81.250	Rhinopithecus_roxellana
ENSEEUG00000005717	-	86	90.625	ENSSBOG00000019135	PNLDC1	67	90.625	Saimiri_boliviensis_boliviensis
ENSEEUG00000005717	-	86	65.625	ENSSHAG00000015192	PNLDC1	69	65.625	Sarcophilus_harrisii
ENSEEUG00000005717	-	53	64.253	ENSSPUG00000004627	PNLDC1	95	63.380	Sphenodon_punctatus
ENSEEUG00000005717	-	86	84.375	ENSSSCG00000004046	PNLDC1	70	84.375	Sus_scrofa
ENSEEUG00000005717	-	85	62.500	ENSTGUG00000011418	PNLDC1	73	62.500	Taeniopygia_guttata
ENSEEUG00000005717	-	86	78.125	ENSTBEG00000009131	PNLDC1	69	78.125	Tupaia_belangeri
ENSEEUG00000005717	-	82	87.500	ENSUAMG00000015783	PNLDC1	66	87.500	Ursus_americanus
ENSEEUG00000005717	-	86	87.500	ENSUMAG00000011903	PNLDC1	73	87.500	Ursus_maritimus
ENSEEUG00000005717	-	86	87.500	ENSVVUG00000006586	PNLDC1	73	87.500	Vulpes_vulpes