EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000005782 (Gene tree)
Gene ID: -
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 45316 bases
Position: chrGeneScaffold_6403:102109-147424
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005300	GUCT	PF08152.12	1.1e-28	1	1
ENSEEUP00000005300	ResIII	PF04851.15	2.9e-10	1	1
ENSEEUP00000005300	DEAD	PF00270.29	9.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000005813	DDX50-201	2208	-	ENSEEUP00000005300	735 (aa)	-	UPI0000F63FF8

Gene Model

Click here to download ENSEEUG00000005782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000005782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000005782	DDX50	50	34.127	ENSEEUG00000000322	DDX18	54	34.127
ENSEEUG00000005782	DDX50	50	32.533	ENSEEUG00000003581	EIF4A1	88	31.989
ENSEEUG00000005782	DDX50	72	66.730	ENSEEUG00000005959	DDX21	76	66.730

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000005782	DDX50	81	98.589	ENSG00000107625	DDX50	89	96.166	Homo_sapiens
ENSEEUG00000005782	DDX50	82	100.000	ENSAMEG00000017992	DDX50	89	100.000	Ailuropoda_melanoleuca
ENSEEUG00000005782	DDX50	81	89.655	ENSANAG00000017785	-	88	89.655	Aotus_nancymaae
ENSEEUG00000005782	DDX50	89	96.552	ENSBTAG00000033413	DDX50	88	96.552	Bos_taurus
ENSEEUG00000005782	DDX50	81	98.765	ENSCJAG00000018844	DDX50	99	93.899	Callithrix_jacchus
ENSEEUG00000005782	DDX50	82	98.249	ENSCAFG00000013776	DDX50	89	96.552	Canis_familiaris
ENSEEUG00000005782	DDX50	82	98.249	ENSCAFG00020025977	DDX50	89	96.552	Canis_lupus_dingo
ENSEEUG00000005782	DDX50	86	96.552	ENSCHIG00000000285	DDX50	86	96.552	Capra_hircus
ENSEEUG00000005782	DDX50	81	98.060	ENSTSYG00000004192	DDX50	94	96.317	Carlito_syrichta
ENSEEUG00000005782	DDX50	85	76.997	ENSCAPG00000007230	-	83	76.997	Cavia_aperea
ENSEEUG00000005782	DDX50	77	97.513	ENSCPOG00000002131	-	89	95.048	Cavia_porcellus
ENSEEUG00000005782	DDX50	81	89.655	ENSCCAG00000030543	DDX50	88	89.655	Cebus_capucinus
ENSEEUG00000005782	DDX50	84	96.926	ENSCATG00000032463	DDX50	87	96.926	Cercocebus_atys
ENSEEUG00000005782	DDX50	87	86.207	ENSCATG00000035153	-	91	88.344	Cercocebus_atys
ENSEEUG00000005782	DDX50	77	66.316	ENSCATG00000039259	-	83	73.585	Cercocebus_atys
ENSEEUG00000005782	DDX50	79	98.559	ENSCLAG00000012957	-	89	95.687	Chinchilla_lanigera
ENSEEUG00000005782	DDX50	50	82.656	ENSCLAG00000001553	-	89	84.770	Chinchilla_lanigera
ENSEEUG00000005782	DDX50	83	68.189	ENSCLAG00000001938	-	79	70.383	Chinchilla_lanigera
ENSEEUG00000005782	DDX50	81	98.765	ENSCSAG00000007703	DDX50	89	96.326	Chlorocebus_sabaeus
ENSEEUG00000005782	DDX50	79	95.548	ENSCHOG00000000233	DDX50	88	95.548	Choloepus_hoffmanni
ENSEEUG00000005782	DDX50	85	70.175	ENSCANG00000018820	-	88	72.174	Colobus_angolensis_palliatus
ENSEEUG00000005782	DDX50	87	79.310	ENSCANG00000028077	-	81	79.310	Colobus_angolensis_palliatus
ENSEEUG00000005782	DDX50	81	89.655	ENSCANG00000036450	-	88	89.655	Colobus_angolensis_palliatus
ENSEEUG00000005782	DDX50	81	96.825	ENSCGRG00001020223	Ddx50	89	94.409	Cricetulus_griseus_chok1gshd
ENSEEUG00000005782	DDX50	81	96.986	ENSCGRG00000015884	Ddx50	89	91.840	Cricetulus_griseus_crigri
ENSEEUG00000005782	DDX50	76	91.541	ENSDNOG00000001675	DDX50	87	91.541	Dasypus_novemcinctus
ENSEEUG00000005782	DDX50	81	97.884	ENSDORG00000007310	Ddx50	86	96.860	Dipodomys_ordii
ENSEEUG00000005782	DDX50	71	98.219	ENSETEG00000014069	DDX50	76	94.884	Echinops_telfairi
ENSEEUG00000005782	DDX50	81	98.070	ENSEASG00005015595	DDX50	89	96.552	Equus_asinus_asinus
ENSEEUG00000005782	DDX50	81	98.246	ENSECAG00000023044	DDX50	89	96.552	Equus_caballus
ENSEEUG00000005782	DDX50	81	98.413	ENSFCAG00000012678	DDX50	89	96.552	Felis_catus
ENSEEUG00000005782	DDX50	81	90.300	ENSFDAG00000016109	-	88	89.655	Fukomys_damarensis
ENSEEUG00000005782	DDX50	88	96.764	ENSGGOG00000010100	DDX50	99	94.385	Gorilla_gorilla
ENSEEUG00000005782	DDX50	51	76.596	ENSGGOG00000041063	-	91	80.899	Gorilla_gorilla
ENSEEUG00000005782	DDX50	81	97.002	ENSHGLG00000013466	DDX50	89	94.728	Heterocephalus_glaber_female
ENSEEUG00000005782	DDX50	81	97.002	ENSHGLG00100017191	DDX50	89	94.728	Heterocephalus_glaber_male
ENSEEUG00000005782	DDX50	71	86.170	ENSHGLG00100006568	-	81	85.641	Heterocephalus_glaber_male
ENSEEUG00000005782	DDX50	86	91.901	ENSSTOG00000021852	-	89	93.610	Ictidomys_tridecemlineatus
ENSEEUG00000005782	DDX50	89	91.054	ENSJJAG00000023928	-	89	94.089	Jaculus_jaculus
ENSEEUG00000005782	DDX50	89	82.759	ENSJJAG00000019626	-	91	82.759	Jaculus_jaculus
ENSEEUG00000005782	DDX50	81	98.236	ENSLAFG00000006186	DDX50	89	94.400	Loxodonta_africana
ENSEEUG00000005782	DDX50	86	86.207	ENSMFAG00000045339	-	97	82.535	Macaca_fascicularis
ENSEEUG00000005782	DDX50	81	98.765	ENSMFAG00000044067	DDX50	89	96.326	Macaca_fascicularis
ENSEEUG00000005782	DDX50	77	67.895	ENSMMUG00000045343	-	78	67.826	Macaca_mulatta
ENSEEUG00000005782	DDX50	81	98.765	ENSMMUG00000001006	DDX50	93	96.326	Macaca_mulatta
ENSEEUG00000005782	DDX50	86	86.207	ENSMNEG00000045530	-	97	82.597	Macaca_nemestrina
ENSEEUG00000005782	DDX50	81	90.653	ENSMNEG00000031664	DDX50	88	89.655	Macaca_nemestrina
ENSEEUG00000005782	DDX50	81	96.296	ENSMLEG00000037313	DDX50	89	95.372	Mandrillus_leucophaeus
ENSEEUG00000005782	DDX50	75	86.207	ENSMLEG00000041988	-	90	86.769	Mandrillus_leucophaeus
ENSEEUG00000005782	DDX50	79	93.103	ENSMICG00000017539	DDX50	88	93.103	Microcebus_murinus
ENSEEUG00000005782	DDX50	81	97.002	ENSMOCG00000001676	Ddx50	89	94.569	Microtus_ochrogaster
ENSEEUG00000005782	DDX50	75	87.523	ENSMODG00000010741	DDX50	80	82.975	Monodelphis_domestica
ENSEEUG00000005782	DDX50	79	97.297	MGP_CAROLIEiJ_G0015389	Ddx50	86	95.833	Mus_caroli
ENSEEUG00000005782	DDX50	79	97.477	ENSMUSG00000020076	Ddx50	86	95.833	Mus_musculus
ENSEEUG00000005782	DDX50	79	97.477	MGP_PahariEiJ_G0030805	Ddx50	86	95.833	Mus_pahari
ENSEEUG00000005782	DDX50	79	97.477	MGP_SPRETEiJ_G0016200	Ddx50	86	95.833	Mus_spretus
ENSEEUG00000005782	DDX50	77	97.761	ENSMPUG00000004589	DDX50	87	97.761	Mustela_putorius_furo
ENSEEUG00000005782	DDX50	81	96.825	ENSMLUG00000017590	DDX50	89	94.569	Myotis_lucifugus
ENSEEUG00000005782	DDX50	81	97.354	ENSNGAG00000004283	Ddx50	89	94.888	Nannospalax_galili
ENSEEUG00000005782	DDX50	83	70.016	ENSNLEG00000035506	-	98	73.743	Nomascus_leucogenys
ENSEEUG00000005782	DDX50	88	96.764	ENSNLEG00000011631	DDX50	91	96.764	Nomascus_leucogenys
ENSEEUG00000005782	DDX50	75	97.464	ENSOPRG00000001619	DDX50	89	96.552	Ochotona_princeps
ENSEEUG00000005782	DDX50	80	98.201	ENSODEG00000014597	-	86	96.694	Octodon_degus
ENSEEUG00000005782	DDX50	84	69.516	ENSOANG00000004776	DDX50	72	73.628	Ornithorhynchus_anatinus
ENSEEUG00000005782	DDX50	85	93.000	ENSOCUG00000002879	DDX50	86	93.069	Oryctolagus_cuniculus
ENSEEUG00000005782	DDX50	81	98.060	ENSOGAG00000001844	DDX50	89	95.687	Otolemur_garnettii
ENSEEUG00000005782	DDX50	86	96.552	ENSOARG00000005264	DDX50	86	96.552	Ovis_aries
ENSEEUG00000005782	DDX50	88	96.764	ENSPPAG00000040723	DDX50	91	96.764	Pan_paniscus
ENSEEUG00000005782	DDX50	84	96.602	ENSPPRG00000015826	DDX50	89	96.552	Panthera_pardus
ENSEEUG00000005782	DDX50	84	96.602	ENSPTIG00000008454	DDX50	89	96.552	Panthera_tigris_altaica
ENSEEUG00000005782	DDX50	88	96.764	ENSPTRG00000002562	DDX50	91	96.764	Pan_troglodytes
ENSEEUG00000005782	DDX50	81	89.655	ENSPANG00000022143	-	88	89.655	Papio_anubis
ENSEEUG00000005782	DDX50	77	95.767	ENSPEMG00000020899	-	89	92.320	Peromyscus_maniculatus_bairdii
ENSEEUG00000005782	DDX50	76	86.535	ENSPCIG00000016036	DDX50	83	82.781	Phascolarctos_cinereus
ENSEEUG00000005782	DDX50	77	98.589	ENSPPYG00000002390	DDX50	93	96.166	Pongo_abelii
ENSEEUG00000005782	DDX50	73	81.086	ENSPCAG00000009692	DDX50	87	81.086	Procavia_capensis
ENSEEUG00000005782	DDX50	70	82.946	ENSPCOG00000012574	DDX50	80	82.946	Propithecus_coquereli
ENSEEUG00000005782	DDX50	75	97.619	ENSPVAG00000009519	DDX50	75	97.619	Pteropus_vampyrus
ENSEEUG00000005782	DDX50	79	97.117	ENSRNOG00000000396	Ddx50	98	93.048	Rattus_norvegicus
ENSEEUG00000005782	DDX50	86	79.310	ENSRBIG00000039673	-	79	79.310	Rhinopithecus_bieti
ENSEEUG00000005782	DDX50	77	70.265	ENSRBIG00000036573	-	84	73.994	Rhinopithecus_bieti
ENSEEUG00000005782	DDX50	73	98.318	ENSRBIG00000042841	-	91	98.318	Rhinopithecus_bieti
ENSEEUG00000005782	DDX50	81	65.794	ENSRROG00000022853	-	85	70.219	Rhinopithecus_roxellana
ENSEEUG00000005782	DDX50	88	96.764	ENSRROG00000032158	DDX50	93	96.166	Rhinopithecus_roxellana
ENSEEUG00000005782	DDX50	89	89.655	ENSSBOG00000014441	DDX50	90	89.655	Saimiri_boliviensis_boliviensis
ENSEEUG00000005782	DDX50	75	71.790	ENSSHAG00000005334	-	75	70.261	Sarcophilus_harrisii
ENSEEUG00000005782	DDX50	75	87.342	ENSSHAG00000005690	DDX50	83	83.250	Sarcophilus_harrisii
ENSEEUG00000005782	DDX50	89	89.655	ENSSARG00000013553	DDX50	89	89.655	Sorex_araneus
ENSEEUG00000005782	DDX50	89	96.552	ENSSSCG00000010246	DDX50	89	96.552	Sus_scrofa
ENSEEUG00000005782	DDX50	79	93.103	ENSTBEG00000001085	DDX50	86	93.103	Tupaia_belangeri
ENSEEUG00000005782	DDX50	81	96.552	ENSTTRG00000012408	DDX50	89	96.552	Tursiops_truncatus
ENSEEUG00000005782	DDX50	82	100.000	ENSUAMG00000010976	DDX50	99	95.563	Ursus_americanus
ENSEEUG00000005782	DDX50	82	100.000	ENSUMAG00000007726	DDX50	89	100.000	Ursus_maritimus
ENSEEUG00000005782	DDX50	81	97.884	ENSVPAG00000000626	DDX50	89	95.527	Vicugna_pacos
ENSEEUG00000005782	DDX50	71	93.487	ENSVVUG00000020366	DDX50	98	93.850	Vulpes_vulpes