EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000005913 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 10986 bases
Position: chrGeneScaffold_2505:13311-24296
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005396	RRM_1	PF00076.22	7.9e-58	1	4
ENSEEUP00000005396	RRM_1	PF00076.22	7.9e-58	2	4
ENSEEUP00000005396	RRM_1	PF00076.22	7.9e-58	3	4
ENSEEUP00000005396	RRM_1	PF00076.22	7.9e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000005919	NCL-201	2118	-	ENSEEUP00000005396	705 (aa)	-	UPI0000F61C5C

Gene Model

Click here to download ENSEEUG00000005913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000005913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000005913	NCL	85	80.528	ENSG00000115053	NCL	93	83.273	Homo_sapiens
ENSEEUG00000005913	NCL	54	90.501	ENSAMEG00000016289	NCL	85	81.699	Ailuropoda_melanoleuca
ENSEEUG00000005913	NCL	54	91.293	ENSANAG00000035814	-	85	81.353	Aotus_nancymaae
ENSEEUG00000005913	NCL	94	65.204	ENSANAG00000024378	-	93	75.000	Aotus_nancymaae
ENSEEUG00000005913	NCL	62	77.239	ENSBTAG00000026909	-	71	84.519	Bos_taurus
ENSEEUG00000005913	NCL	85	85.714	ENSBTAG00000051320	-	69	84.977	Bos_taurus
ENSEEUG00000005913	NCL	94	78.686	ENSBTAG00000016174	NCL	54	90.765	Bos_taurus
ENSEEUG00000005913	NCL	54	91.293	ENSCJAG00000013538	NCL	85	81.322	Callithrix_jacchus
ENSEEUG00000005913	NCL	85	81.506	ENSCAFG00000011037	NCL	85	83.142	Canis_familiaris
ENSEEUG00000005913	NCL	84	81.260	ENSCAFG00020023145	NCL	89	82.919	Canis_lupus_dingo
ENSEEUG00000005913	NCL	65	75.785	ENSCHIG00000012143	-	86	69.637	Capra_hircus
ENSEEUG00000005913	NCL	84	80.229	ENSCHIG00000010894	-	57	90.501	Capra_hircus
ENSEEUG00000005913	NCL	84	74.671	ENSCHIG00000026149	-	53	84.169	Capra_hircus
ENSEEUG00000005913	NCL	62	74.603	ENSCHIG00000021052	-	77	89.823	Capra_hircus
ENSEEUG00000005913	NCL	85	80.328	ENSTSYG00000004355	-	85	79.180	Carlito_syrichta
ENSEEUG00000005913	NCL	88	77.694	ENSTSYG00000029779	-	90	76.217	Carlito_syrichta
ENSEEUG00000005913	NCL	83	69.440	ENSTSYG00000036886	-	61	79.365	Carlito_syrichta
ENSEEUG00000005913	NCL	54	82.586	ENSCAPG00000009405	NCL	86	75.574	Cavia_aperea
ENSEEUG00000005913	NCL	54	87.599	ENSCPOG00000001034	NCL	86	78.689	Cavia_porcellus
ENSEEUG00000005913	NCL	54	83.415	ENSCCAG00000000551	-	77	83.415	Cebus_capucinus
ENSEEUG00000005913	NCL	54	91.293	ENSCCAG00000021040	-	85	80.661	Cebus_capucinus
ENSEEUG00000005913	NCL	85	82.838	ENSCATG00000037033	NCL	85	82.673	Cercocebus_atys
ENSEEUG00000005913	NCL	85	78.105	ENSCLAG00000013080	NCL	85	78.595	Chinchilla_lanigera
ENSEEUG00000005913	NCL	54	91.579	ENSCSAG00000006660	NCL	82	91.557	Chlorocebus_sabaeus
ENSEEUG00000005913	NCL	61	70.139	ENSCHOG00000012860	NCL	78	74.074	Choloepus_hoffmanni
ENSEEUG00000005913	NCL	85	77.759	ENSCGRG00001024315	-	85	77.558	Cricetulus_griseus_chok1gshd
ENSEEUG00000005913	NCL	85	65.182	ENSCGRG00001022350	-	88	64.415	Cricetulus_griseus_chok1gshd
ENSEEUG00000005913	NCL	85	64.039	ENSCGRG00000000507	-	86	63.333	Cricetulus_griseus_crigri
ENSEEUG00000005913	NCL	85	76.509	ENSCGRG00000017894	-	88	77.124	Cricetulus_griseus_crigri
ENSEEUG00000005913	NCL	85	71.782	ENSDNOG00000046347	-	85	68.926	Dasypus_novemcinctus
ENSEEUG00000005913	NCL	85	77.651	ENSDNOG00000010783	-	85	76.307	Dasypus_novemcinctus
ENSEEUG00000005913	NCL	54	79.630	ENSDORG00000012513	-	85	73.510	Dipodomys_ordii
ENSEEUG00000005913	NCL	52	69.589	ENSDORG00000023596	-	86	63.773	Dipodomys_ordii
ENSEEUG00000005913	NCL	54	84.433	ENSETEG00000018937	-	85	73.806	Echinops_telfairi
ENSEEUG00000005913	NCL	63	57.079	ENSETEG00000008553	-	80	60.422	Echinops_telfairi
ENSEEUG00000005913	NCL	68	61.957	ENSETEG00000008139	-	64	61.957	Echinops_telfairi
ENSEEUG00000005913	NCL	53	83.554	ENSETEG00000014756	-	86	83.641	Echinops_telfairi
ENSEEUG00000005913	NCL	85	78.699	ENSEASG00005008488	NCL	87	80.424	Equus_asinus_asinus
ENSEEUG00000005913	NCL	85	78.699	ENSECAG00000021868	NCL	85	80.424	Equus_caballus
ENSEEUG00000005913	NCL	85	81.209	ENSFCAG00000027622	NCL	85	82.026	Felis_catus
ENSEEUG00000005913	NCL	85	79.639	ENSFDAG00000014291	NCL	86	79.146	Fukomys_damarensis
ENSEEUG00000005913	NCL	85	80.693	ENSGGOG00000004300	NCL	85	81.188	Gorilla_gorilla
ENSEEUG00000005913	NCL	85	80.560	ENSHGLG00000002031	-	85	79.407	Heterocephalus_glaber_female
ENSEEUG00000005913	NCL	85	72.287	ENSHGLG00000011069	-	85	72.047	Heterocephalus_glaber_female
ENSEEUG00000005913	NCL	69	79.733	ENSHGLG00100000745	-	82	79.841	Heterocephalus_glaber_male
ENSEEUG00000005913	NCL	85	81.095	ENSHGLG00100014537	-	85	80.100	Heterocephalus_glaber_male
ENSEEUG00000005913	NCL	54	77.309	ENSJJAG00000016165	Ncl	86	71.927	Jaculus_jaculus
ENSEEUG00000005913	NCL	85	82.867	ENSMFAG00000040385	NCL	85	82.013	Macaca_fascicularis
ENSEEUG00000005913	NCL	85	82.867	ENSMMUG00000018094	NCL	85	82.013	Macaca_mulatta
ENSEEUG00000005913	NCL	62	86.199	ENSMNEG00000023839	NCL	55	91.821	Macaca_nemestrina
ENSEEUG00000005913	NCL	85	83.003	ENSMLEG00000028935	NCL	85	82.838	Mandrillus_leucophaeus
ENSEEUG00000005913	NCL	85	79.736	ENSMICG00000002538	-	85	80.693	Microcebus_murinus
ENSEEUG00000005913	NCL	85	63.333	ENSMICG00000029975	-	76	74.118	Microcebus_murinus
ENSEEUG00000005913	NCL	85	73.719	MGP_CAROLIEiJ_G0014362	Ncl	85	75.372	Mus_caroli
ENSEEUG00000005913	NCL	85	73.102	ENSMUSG00000026234	Ncl	53	81.217	Mus_musculus
ENSEEUG00000005913	NCL	85	72.817	MGP_PahariEiJ_G0027599	Ncl	53	81.481	Mus_pahari
ENSEEUG00000005913	NCL	85	73.762	MGP_SPRETEiJ_G0015164	Ncl	53	81.217	Mus_spretus
ENSEEUG00000005913	NCL	85	78.140	ENSMLUG00000014547	NCL	53	90.501	Myotis_lucifugus
ENSEEUG00000005913	NCL	53	69.761	ENSNGAG00000006188	-	54	68.865	Nannospalax_galili
ENSEEUG00000005913	NCL	85	76.183	ENSNGAG00000002454	-	85	75.817	Nannospalax_galili
ENSEEUG00000005913	NCL	62	74.074	ENSNLEG00000014107	-	85	70.664	Nomascus_leucogenys
ENSEEUG00000005913	NCL	85	62.183	ENSODEG00000007803	-	83	62.646	Octodon_degus
ENSEEUG00000005913	NCL	86	76.384	ENSODEG00000003281	-	86	77.036	Octodon_degus
ENSEEUG00000005913	NCL	83	76.570	ENSODEG00000002748	-	85	75.932	Octodon_degus
ENSEEUG00000005913	NCL	84	79.661	ENSODEG00000002441	-	76	79.661	Octodon_degus
ENSEEUG00000005913	NCL	60	81.794	ENSOGAG00000027852	NCL	62	81.794	Otolemur_garnettii
ENSEEUG00000005913	NCL	85	71.429	ENSOARG00000013710	-	64	88.391	Ovis_aries
ENSEEUG00000005913	NCL	55	74.611	ENSOARG00000004072	-	61	74.934	Ovis_aries
ENSEEUG00000005913	NCL	62	86.301	ENSOARG00000020709	-	56	89.529	Ovis_aries
ENSEEUG00000005913	NCL	85	81.848	ENSPPAG00000011619	NCL	85	82.178	Pan_paniscus
ENSEEUG00000005913	NCL	85	80.851	ENSPPRG00000012603	NCL	85	81.833	Panthera_pardus
ENSEEUG00000005913	NCL	85	80.687	ENSPTIG00000010393	NCL	85	81.669	Panthera_tigris_altaica
ENSEEUG00000005913	NCL	85	81.908	ENSPTRG00000013025	NCL	69	80.475	Pan_troglodytes
ENSEEUG00000005913	NCL	85	82.867	ENSPANG00000010292	NCL	85	82.013	Papio_anubis
ENSEEUG00000005913	NCL	85	73.607	ENSPPYG00000013265	NCL	85	73.366	Pongo_abelii
ENSEEUG00000005913	NCL	84	76.167	ENSPCOG00000004160	-	87	74.751	Propithecus_coquereli
ENSEEUG00000005913	NCL	94	81.343	ENSPCOG00000003051	-	85	80.725	Propithecus_coquereli
ENSEEUG00000005913	NCL	85	81.518	ENSPVAG00000000297	NCL	53	91.029	Pteropus_vampyrus
ENSEEUG00000005913	NCL	85	74.262	ENSRNOG00000018273	Ncl	53	82.804	Rattus_norvegicus
ENSEEUG00000005913	NCL	85	78.218	ENSRBIG00000037525	-	85	77.355	Rhinopithecus_bieti
ENSEEUG00000005913	NCL	88	78.318	ENSRROG00000036103	-	92	77.680	Rhinopithecus_roxellana
ENSEEUG00000005913	NCL	85	81.384	ENSRROG00000028756	-	85	80.693	Rhinopithecus_roxellana
ENSEEUG00000005913	NCL	63	68.950	ENSSBOG00000023094	-	71	69.231	Saimiri_boliviensis_boliviensis
ENSEEUG00000005913	NCL	54	91.029	ENSSBOG00000029193	-	85	81.281	Saimiri_boliviensis_boliviensis
ENSEEUG00000005913	NCL	62	79.545	ENSSBOG00000027549	-	84	73.841	Saimiri_boliviensis_boliviensis
ENSEEUG00000005913	NCL	69	71.533	ENSTBEG00000002469	-	61	76.504	Tupaia_belangeri
ENSEEUG00000005913	NCL	56	78.100	ENSTBEG00000001546	-	85	73.927	Tupaia_belangeri
ENSEEUG00000005913	NCL	85	81.653	ENSTTRG00000009094	NCL	85	81.653	Tursiops_truncatus
ENSEEUG00000005913	NCL	54	90.501	ENSUAMG00000005639	NCL	75	90.501	Ursus_americanus
ENSEEUG00000005913	NCL	54	90.501	ENSUMAG00000015789	NCL	85	81.579	Ursus_maritimus
ENSEEUG00000005913	NCL	63	77.971	ENSVPAG00000001796	NCL	63	77.971	Vicugna_pacos
ENSEEUG00000005913	NCL	85	80.265	ENSVVUG00000025564	NCL	56	90.765	Vulpes_vulpes