EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000005966 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 53703 bases
Position: chrGeneScaffold_5094:1121-54823
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005419	RRM_1	PF00076.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000005943	-	1197	-	ENSEEUP00000005419	399 (aa)	-	UPI0000F629E4

Gene Model

Click here to download ENSEEUG00000005966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000005966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000005966	-	71	99.394	ENSG00000149532	CPSF7	88	99.213	Homo_sapiens
ENSEEUG00000005966	-	66	61.017	ENSG00000111605	CPSF6	55	62.069	Homo_sapiens
ENSEEUG00000005966	-	70	97.516	ENSAMEG00000016595	CPSF7	54	97.516	Ailuropoda_melanoleuca
ENSEEUG00000005966	-	66	61.739	ENSAOCG00000017865	cpsf6	50	60.833	Amphiprion_ocellaris
ENSEEUG00000005966	-	70	99.394	ENSANAG00000024635	CPSF7	60	99.394	Aotus_nancymaae
ENSEEUG00000005966	-	67	62.069	ENSAMXG00000016745	CPSF6	60	60.331	Astyanax_mexicanus
ENSEEUG00000005966	-	71	99.394	ENSBTAG00000015263	CPSF7	61	99.394	Bos_taurus
ENSEEUG00000005966	-	68	61.017	ENSCJAG00000001798	CPSF6	57	62.069	Callithrix_jacchus
ENSEEUG00000005966	-	71	99.394	ENSCJAG00000019282	CPSF7	71	99.394	Callithrix_jacchus
ENSEEUG00000005966	-	66	61.017	ENSCAFG00000000424	CPSF6	55	61.224	Canis_familiaris
ENSEEUG00000005966	-	71	100.000	ENSCAFG00000016152	CPSF7	61	100.000	Canis_familiaris
ENSEEUG00000005966	-	71	100.000	ENSCAFG00020012753	CPSF7	61	100.000	Canis_lupus_dingo
ENSEEUG00000005966	-	71	99.394	ENSCHIG00000014655	CPSF7	61	99.394	Capra_hircus
ENSEEUG00000005966	-	66	61.017	ENSTSYG00000008591	CPSF6	59	62.069	Carlito_syrichta
ENSEEUG00000005966	-	71	99.394	ENSTSYG00000010138	-	61	99.394	Carlito_syrichta
ENSEEUG00000005966	-	71	98.788	ENSCAPG00000006384	CPSF7	63	98.788	Cavia_aperea
ENSEEUG00000005966	-	71	98.788	ENSCPOG00000009980	CPSF7	61	98.788	Cavia_porcellus
ENSEEUG00000005966	-	66	61.017	ENSCCAG00000028149	CPSF6	57	62.069	Cebus_capucinus
ENSEEUG00000005966	-	71	99.394	ENSCCAG00000032367	CPSF7	61	99.394	Cebus_capucinus
ENSEEUG00000005966	-	66	61.017	ENSCATG00000039288	CPSF6	56	62.069	Cercocebus_atys
ENSEEUG00000005966	-	71	99.394	ENSCATG00000042801	CPSF7	61	99.394	Cercocebus_atys
ENSEEUG00000005966	-	66	61.864	ENSCLAG00000010149	CPSF6	50	62.931	Chinchilla_lanigera
ENSEEUG00000005966	-	71	98.788	ENSCLAG00000003174	CPSF7	61	98.788	Chinchilla_lanigera
ENSEEUG00000005966	-	69	99.363	ENSCSAG00000006414	CPSF7	60	99.363	Chlorocebus_sabaeus
ENSEEUG00000005966	-	65	60.952	ENSCSAVG00000000161	-	57	49.296	Ciona_savignyi
ENSEEUG00000005966	-	66	61.017	ENSCANG00000037294	CPSF6	56	62.069	Colobus_angolensis_palliatus
ENSEEUG00000005966	-	71	98.182	ENSCGRG00001020382	Cpsf7	61	98.182	Cricetulus_griseus_chok1gshd
ENSEEUG00000005966	-	71	98.182	ENSCGRG00000017954	Cpsf7	61	98.182	Cricetulus_griseus_crigri
ENSEEUG00000005966	-	66	61.017	ENSCGRG00000016909	Cpsf6	50	62.069	Cricetulus_griseus_crigri
ENSEEUG00000005966	-	66	60.526	ENSCSEG00000008967	cpsf6	52	60.684	Cynoglossus_semilaevis
ENSEEUG00000005966	-	67	61.017	ENSCVAG00000014857	cpsf6	57	59.459	Cyprinodon_variegatus
ENSEEUG00000005966	-	71	98.788	ENSDNOG00000018517	CPSF7	71	98.788	Dasypus_novemcinctus
ENSEEUG00000005966	-	58	70.513	FBgn0035872	CG7185	50	49.640	Drosophila_melanogaster
ENSEEUG00000005966	-	71	96.970	ENSETEG00000003765	CPSF7	61	96.970	Echinops_telfairi
ENSEEUG00000005966	-	67	62.931	ENSEBUG00000003540	cpsf6	54	62.931	Eptatretus_burgeri
ENSEEUG00000005966	-	71	99.394	ENSEASG00005008196	CPSF7	61	99.394	Equus_asinus_asinus
ENSEEUG00000005966	-	69	99.363	ENSECAG00000018521	CPSF7	71	99.363	Equus_caballus
ENSEEUG00000005966	-	71	100.000	ENSFCAG00000013677	CPSF7	71	100.000	Felis_catus
ENSEEUG00000005966	-	66	61.017	ENSFALG00000010157	CPSF6	50	62.069	Ficedula_albicollis
ENSEEUG00000005966	-	67	86.624	ENSFALG00000011927	CPSF7	63	86.624	Ficedula_albicollis
ENSEEUG00000005966	-	71	97.576	ENSFDAG00000003919	CPSF7	61	97.576	Fukomys_damarensis
ENSEEUG00000005966	-	67	86.624	ENSGALG00000040962	CPSF7	52	86.624	Gallus_gallus
ENSEEUG00000005966	-	66	61.017	ENSGGOG00000008211	CPSF6	56	62.069	Gorilla_gorilla
ENSEEUG00000005966	-	69	98.089	ENSHGLG00000019090	-	60	98.089	Heterocephalus_glaber_female
ENSEEUG00000005966	-	66	61.864	ENSHGLG00100013861	CPSF6	50	62.931	Heterocephalus_glaber_male
ENSEEUG00000005966	-	69	96.815	ENSHGLG00100013933	-	61	96.815	Heterocephalus_glaber_male
ENSEEUG00000005966	-	66	61.017	ENSSTOG00000014133	CPSF6	50	62.069	Ictidomys_tridecemlineatus
ENSEEUG00000005966	-	71	99.394	ENSSTOG00000007708	CPSF7	61	99.394	Ictidomys_tridecemlineatus
ENSEEUG00000005966	-	69	98.726	ENSJJAG00000019390	Cpsf7	60	98.726	Jaculus_jaculus
ENSEEUG00000005966	-	68	58.974	ENSKMAG00000014794	cpsf6	50	59.350	Kryptolebias_marmoratus
ENSEEUG00000005966	-	58	61.905	ENSLBEG00000000947	CPSF7	51	62.069	Labrus_bergylta
ENSEEUG00000005966	-	58	58.065	ENSLACG00000005542	CPSF7	58	58.065	Latimeria_chalumnae
ENSEEUG00000005966	-	66	61.017	ENSLAFG00000030413	CPSF6	56	59.434	Loxodonta_africana
ENSEEUG00000005966	-	71	99.394	ENSLAFG00000032084	CPSF7	61	99.394	Loxodonta_africana
ENSEEUG00000005966	-	71	99.394	ENSMFAG00000001401	CPSF7	61	99.394	Macaca_fascicularis
ENSEEUG00000005966	-	66	61.017	ENSMFAG00000045318	CPSF6	56	62.069	Macaca_fascicularis
ENSEEUG00000005966	-	71	99.394	ENSMMUG00000015280	CPSF7	61	99.394	Macaca_mulatta
ENSEEUG00000005966	-	66	61.017	ENSMMUG00000002921	CPSF6	55	62.069	Macaca_mulatta
ENSEEUG00000005966	-	66	61.017	ENSMNEG00000036311	CPSF6	56	62.069	Macaca_nemestrina
ENSEEUG00000005966	-	71	98.773	ENSMNEG00000029585	CPSF7	61	98.773	Macaca_nemestrina
ENSEEUG00000005966	-	66	61.017	ENSMLEG00000003957	CPSF6	56	62.069	Mandrillus_leucophaeus
ENSEEUG00000005966	-	71	99.394	ENSMLEG00000031269	CPSF7	61	98.773	Mandrillus_leucophaeus
ENSEEUG00000005966	-	66	61.017	ENSMGAG00000010552	CPSF6	50	62.069	Meleagris_gallopavo
ENSEEUG00000005966	-	68	85.443	ENSMGAG00000004876	CPSF7	51	85.443	Meleagris_gallopavo
ENSEEUG00000005966	-	71	98.182	ENSMAUG00000013020	Cpsf7	61	98.182	Mesocricetus_auratus
ENSEEUG00000005966	-	66	61.017	ENSMICG00000007385	-	56	62.069	Microcebus_murinus
ENSEEUG00000005966	-	71	98.788	ENSMICG00000013788	CPSF7	61	98.788	Microcebus_murinus
ENSEEUG00000005966	-	71	97.576	ENSMOCG00000000072	Cpsf7	61	97.576	Microtus_ochrogaster
ENSEEUG00000005966	-	71	92.121	ENSMODG00000020364	CPSF7	62	92.121	Monodelphis_domestica
ENSEEUG00000005966	-	66	61.739	ENSMALG00000014908	cpsf6	54	61.739	Monopterus_albus
ENSEEUG00000005966	-	71	97.500	MGP_CAROLIEiJ_G0022690	Cpsf7	61	97.500	Mus_caroli
ENSEEUG00000005966	-	71	97.500	ENSMUSG00000034820	Cpsf7	61	97.500	Mus_musculus
ENSEEUG00000005966	-	71	97.500	MGP_PahariEiJ_G0014184	Cpsf7	61	97.500	Mus_pahari
ENSEEUG00000005966	-	71	97.500	MGP_SPRETEiJ_G0023604	Cpsf7	61	97.500	Mus_spretus
ENSEEUG00000005966	-	71	100.000	ENSMPUG00000014163	CPSF7	60	100.000	Mustela_putorius_furo
ENSEEUG00000005966	-	65	54.808	ENSMLUG00000023960	-	56	57.143	Myotis_lucifugus
ENSEEUG00000005966	-	69	99.363	ENSMLUG00000013278	CPSF7	60	99.363	Myotis_lucifugus
ENSEEUG00000005966	-	60	65.217	ENSMLUG00000028728	-	65	56.198	Myotis_lucifugus
ENSEEUG00000005966	-	71	98.182	ENSNGAG00000005031	Cpsf7	61	98.182	Nannospalax_galili
ENSEEUG00000005966	-	66	62.931	ENSNBRG00000004089	cpsf6	50	62.393	Neolamprologus_brichardi
ENSEEUG00000005966	-	66	61.017	ENSNLEG00000003798	CPSF6	56	62.069	Nomascus_leucogenys
ENSEEUG00000005966	-	71	99.394	ENSNLEG00000002529	CPSF7	55	99.394	Nomascus_leucogenys
ENSEEUG00000005966	-	71	92.121	ENSMEUG00000002261	CPSF7	61	92.121	Notamacropus_eugenii
ENSEEUG00000005966	-	71	97.576	ENSODEG00000002610	CPSF7	61	97.576	Octodon_degus
ENSEEUG00000005966	-	66	61.864	ENSODEG00000004418	-	63	60.656	Octodon_degus
ENSEEUG00000005966	-	71	99.394	ENSOCUG00000024726	CPSF7	61	99.394	Oryctolagus_cuniculus
ENSEEUG00000005966	-	65	50.442	ENSOMEG00000000539	CPSF7	51	50.442	Oryzias_melastigma
ENSEEUG00000005966	-	71	99.394	ENSOGAG00000027958	CPSF7	56	99.394	Otolemur_garnettii
ENSEEUG00000005966	-	70	98.101	ENSOARG00000012937	CPSF7	53	98.101	Ovis_aries
ENSEEUG00000005966	-	71	99.394	ENSPPAG00000028232	CPSF7	62	99.394	Pan_paniscus
ENSEEUG00000005966	-	71	100.000	ENSPPRG00000008538	CPSF7	61	100.000	Panthera_pardus
ENSEEUG00000005966	-	71	100.000	ENSPTIG00000021699	CPSF7	61	100.000	Panthera_tigris_altaica
ENSEEUG00000005966	-	71	99.394	ENSPTRG00000003742	CPSF7	62	99.394	Pan_troglodytes
ENSEEUG00000005966	-	66	61.017	ENSPTRG00000005205	CPSF6	56	62.069	Pan_troglodytes
ENSEEUG00000005966	-	58	79.221	ENSPANG00000011641	CPSF6	56	62.069	Papio_anubis
ENSEEUG00000005966	-	71	99.394	ENSPANG00000006037	CPSF7	61	98.773	Papio_anubis
ENSEEUG00000005966	-	61	70.652	ENSPKIG00000018054	CPSF7	52	70.652	Paramormyrops_kingsleyae
ENSEEUG00000005966	-	71	98.182	ENSPEMG00000012648	Cpsf7	61	98.182	Peromyscus_maniculatus_bairdii
ENSEEUG00000005966	-	66	61.017	ENSPEMG00000007973	Cpsf6	50	62.069	Peromyscus_maniculatus_bairdii
ENSEEUG00000005966	-	71	92.121	ENSPCIG00000002551	CPSF7	72	92.121	Phascolarctos_cinereus
ENSEEUG00000005966	-	67	60.684	ENSPFOG00000006990	cpsf6	57	61.017	Poecilia_formosa
ENSEEUG00000005966	-	67	61.017	ENSPLAG00000005715	cpsf6	53	61.345	Poecilia_latipinna
ENSEEUG00000005966	-	71	99.394	ENSPPYG00000003188	CPSF7	61	99.394	Pongo_abelii
ENSEEUG00000005966	-	71	98.788	ENSPCOG00000011976	CPSF7	61	98.788	Propithecus_coquereli
ENSEEUG00000005966	-	66	61.017	ENSPCOG00000024384	CPSF6	57	62.069	Propithecus_coquereli
ENSEEUG00000005966	-	71	98.788	ENSPVAG00000010675	CPSF7	61	98.788	Pteropus_vampyrus
ENSEEUG00000005966	-	66	58.716	ENSPNAG00000015073	CPSF7	56	58.716	Pygocentrus_nattereri
ENSEEUG00000005966	-	69	96.815	ENSRNOG00000020668	Cpsf7	60	96.815	Rattus_norvegicus
ENSEEUG00000005966	-	71	99.394	ENSRBIG00000031429	CPSF7	71	99.363	Rhinopithecus_bieti
ENSEEUG00000005966	-	66	61.017	ENSRBIG00000042827	CPSF6	56	62.069	Rhinopithecus_bieti
ENSEEUG00000005966	-	66	61.017	ENSRROG00000042758	CPSF6	56	62.069	Rhinopithecus_roxellana
ENSEEUG00000005966	-	71	99.394	ENSRROG00000045009	CPSF7	61	99.394	Rhinopithecus_roxellana
ENSEEUG00000005966	-	71	99.394	ENSSBOG00000018431	CPSF7	61	99.394	Saimiri_boliviensis_boliviensis
ENSEEUG00000005966	-	66	61.017	ENSSBOG00000010652	CPSF6	57	62.069	Saimiri_boliviensis_boliviensis
ENSEEUG00000005966	-	70	92.121	ENSSHAG00000011964	CPSF7	61	92.121	Sarcophilus_harrisii
ENSEEUG00000005966	-	61	62.500	ENSSFOG00015010288	cpsf7	54	62.500	Scleropages_formosus
ENSEEUG00000005966	-	66	61.017	ENSSFOG00015015803	CPSF6	50	59.350	Scleropages_formosus
ENSEEUG00000005966	-	67	84.404	ENSSPUG00000019344	CPSF7	60	84.076	Sphenodon_punctatus
ENSEEUG00000005966	-	66	61.062	ENSSPAG00000013906	cpsf6	50	60.833	Stegastes_partitus
ENSEEUG00000005966	-	71	99.394	ENSSSCG00000013083	CPSF7	71	99.394	Sus_scrofa
ENSEEUG00000005966	-	68	83.436	ENSTGUG00000006513	CPSF7	60	83.436	Taeniopygia_guttata
ENSEEUG00000005966	-	71	98.788	ENSTTRG00000011085	CPSF7	63	98.788	Tursiops_truncatus
ENSEEUG00000005966	-	71	100.000	ENSUAMG00000017809	CPSF7	61	100.000	Ursus_americanus
ENSEEUG00000005966	-	69	100.000	ENSUMAG00000011825	CPSF7	60	100.000	Ursus_maritimus
ENSEEUG00000005966	-	71	100.000	ENSVVUG00000004939	CPSF7	71	100.000	Vulpes_vulpes
ENSEEUG00000005966	-	65	59.091	ENSXETG00000006715	cpsf7	53	59.091	Xenopus_tropicalis