EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000005992 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 72568 bases
Position: chrGeneScaffold_5887:23840-96407
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005463	tRNA-synt_1b	PF00579.25	3.3e-55	1	2
ENSEEUP00000005463	tRNA-synt_1b	PF00579.25	3.3e-55	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000005989	-	1584	-	ENSEEUP00000005463	527 (aa)	-	UPI0000F63F48

Gene Model

Click here to download ENSEEUG00000005992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000005992's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000005992	-	88	73.684	ENSG00000134684	YARS	88	73.684	Homo_sapiens
ENSEEUG00000005992	-	73	71.192	ENSAPOG00000020788	yars	88	60.519	Acanthochromis_polyacanthus
ENSEEUG00000005992	-	88	73.947	ENSAMEG00000007476	YARS	88	73.947	Ailuropoda_melanoleuca
ENSEEUG00000005992	-	88	61.316	ENSACIG00000017504	yars	88	61.316	Amphilophus_citrinellus
ENSEEUG00000005992	-	73	72.517	ENSAOCG00000009987	yars	88	61.658	Amphiprion_ocellaris
ENSEEUG00000005992	-	73	72.517	ENSAPEG00000001273	yars	88	61.658	Amphiprion_percula
ENSEEUG00000005992	-	89	72.517	ENSATEG00000005301	yars	100	52.809	Anabas_testudineus
ENSEEUG00000005992	-	85	67.663	ENSAPLG00000005739	YARS	84	67.663	Anas_platyrhynchos
ENSEEUG00000005992	-	86	67.368	ENSACAG00000003568	YARS	86	67.368	Anolis_carolinensis
ENSEEUG00000005992	-	88	73.421	ENSANAG00000034533	YARS	88	73.421	Aotus_nancymaae
ENSEEUG00000005992	-	72	69.667	ENSACLG00000004618	yars	88	59.737	Astatotilapia_calliptera
ENSEEUG00000005992	-	88	63.089	ENSAMXG00000010993	yars	88	63.089	Astyanax_mexicanus
ENSEEUG00000005992	-	88	72.632	ENSBTAG00000018065	YARS	88	72.632	Bos_taurus
ENSEEUG00000005992	-	88	72.632	ENSCJAG00000001037	YARS	88	72.632	Callithrix_jacchus
ENSEEUG00000005992	-	88	73.947	ENSCAFG00000010481	YARS	82	73.947	Canis_familiaris
ENSEEUG00000005992	-	88	73.228	ENSCAFG00020025379	YARS	88	73.228	Canis_lupus_dingo
ENSEEUG00000005992	-	88	72.632	ENSCHIG00000014340	YARS	88	72.632	Capra_hircus
ENSEEUG00000005992	-	88	73.947	ENSTSYG00000005019	YARS	88	73.947	Carlito_syrichta
ENSEEUG00000005992	-	67	95.327	ENSCAPG00000008627	YARS	81	95.327	Cavia_aperea
ENSEEUG00000005992	-	88	72.368	ENSCPOG00000009614	YARS	82	72.368	Cavia_porcellus
ENSEEUG00000005992	-	88	73.684	ENSCCAG00000036757	YARS	86	73.684	Cebus_capucinus
ENSEEUG00000005992	-	88	73.421	ENSCATG00000044394	YARS	94	73.421	Cercocebus_atys
ENSEEUG00000005992	-	87	73.684	ENSCLAG00000008977	YARS	81	73.684	Chinchilla_lanigera
ENSEEUG00000005992	-	88	73.421	ENSCSAG00000001062	YARS	88	73.421	Chlorocebus_sabaeus
ENSEEUG00000005992	-	71	95.327	ENSCHOG00000003939	YARS	72	95.327	Choloepus_hoffmanni
ENSEEUG00000005992	-	74	85.714	ENSCPBG00000010998	YARS	78	85.714	Chrysemys_picta_bellii
ENSEEUG00000005992	-	64	68.136	ENSCING00000005113	-	64	67.677	Ciona_intestinalis
ENSEEUG00000005992	-	65	65.657	ENSCSAVG00000003706	-	70	65.657	Ciona_savignyi
ENSEEUG00000005992	-	88	73.421	ENSCANG00000038285	YARS	94	73.421	Colobus_angolensis_palliatus
ENSEEUG00000005992	-	88	73.421	ENSCGRG00001010863	Yars	82	73.421	Cricetulus_griseus_chok1gshd
ENSEEUG00000005992	-	88	73.421	ENSCGRG00000007526	Yars	82	73.421	Cricetulus_griseus_crigri
ENSEEUG00000005992	-	73	70.199	ENSCSEG00000009643	yars	77	72.340	Cynoglossus_semilaevis
ENSEEUG00000005992	-	88	62.565	ENSCVAG00000016583	yars	88	62.565	Cyprinodon_variegatus
ENSEEUG00000005992	-	88	64.304	ENSDARG00000035913	yars	100	89.655	Danio_rerio
ENSEEUG00000005992	-	87	73.158	ENSDNOG00000000536	YARS	87	73.158	Dasypus_novemcinctus
ENSEEUG00000005992	-	88	72.895	ENSDORG00000011871	Yars	88	72.895	Dipodomys_ordii
ENSEEUG00000005992	-	56	66.221	FBgn0027080	TyrRS	71	56.085	Drosophila_melanogaster
ENSEEUG00000005992	-	74	95.238	ENSETEG00000000215	YARS	74	95.238	Echinops_telfairi
ENSEEUG00000005992	-	86	55.556	ENSEBUG00000004750	yars	87	55.556	Eptatretus_burgeri
ENSEEUG00000005992	-	88	73.158	ENSEASG00005011762	YARS	82	73.158	Equus_asinus_asinus
ENSEEUG00000005992	-	88	73.158	ENSECAG00000010015	YARS	60	73.158	Equus_caballus
ENSEEUG00000005992	-	89	72.945	ENSELUG00000017171	yars	88	62.105	Esox_lucius
ENSEEUG00000005992	-	65	90.625	ENSFCAG00000000704	YARS	76	90.625	Felis_catus
ENSEEUG00000005992	-	86	69.169	ENSFALG00000000592	YARS	81	68.947	Ficedula_albicollis
ENSEEUG00000005992	-	87	72.105	ENSFDAG00000006620	YARS	81	72.105	Fukomys_damarensis
ENSEEUG00000005992	-	73	72.517	ENSFHEG00000022444	yars	72	72.517	Fundulus_heteroclitus
ENSEEUG00000005992	-	69	72.438	ENSGMOG00000006555	yars	77	72.438	Gadus_morhua
ENSEEUG00000005992	-	87	67.105	ENSGALG00000003563	YARS	85	67.105	Gallus_gallus
ENSEEUG00000005992	-	73	71.192	ENSGACG00000008516	yars	88	60.836	Gasterosteus_aculeatus
ENSEEUG00000005992	-	87	65.789	ENSGAGG00000024290	YARS	88	65.789	Gopherus_agassizii
ENSEEUG00000005992	-	88	73.947	ENSGGOG00000014013	YARS	88	73.947	Gorilla_gorilla
ENSEEUG00000005992	-	72	69.667	ENSHBUG00000018909	yars	71	69.900	Haplochromis_burtoni
ENSEEUG00000005992	-	87	72.368	ENSHGLG00000013843	YARS	81	72.368	Heterocephalus_glaber_female
ENSEEUG00000005992	-	87	72.368	ENSHGLG00100002785	-	88	72.368	Heterocephalus_glaber_male
ENSEEUG00000005992	-	73	70.861	ENSHCOG00000006672	yars	71	70.861	Hippocampus_comes
ENSEEUG00000005992	-	99	52.672	ENSIPUG00000021749	yars	87	62.368	Ictalurus_punctatus
ENSEEUG00000005992	-	88	74.474	ENSSTOG00000012031	YARS	82	74.474	Ictidomys_tridecemlineatus
ENSEEUG00000005992	-	88	73.684	ENSJJAG00000013281	Yars	82	73.684	Jaculus_jaculus
ENSEEUG00000005992	-	72	71.333	ENSKMAG00000021752	yars	87	60.677	Kryptolebias_marmoratus
ENSEEUG00000005992	-	73	71.192	ENSLBEG00000024080	yars	88	60.465	Labrus_bergylta
ENSEEUG00000005992	-	100	54.545	ENSLACG00000015577	YARS	88	65.000	Latimeria_chalumnae
ENSEEUG00000005992	-	87	64.211	ENSLOCG00000002165	yars	87	64.211	Lepisosteus_oculatus
ENSEEUG00000005992	-	88	74.211	ENSLAFG00000003786	YARS	84	74.211	Loxodonta_africana
ENSEEUG00000005992	-	88	65.789	ENSMFAG00000040933	YARS	94	66.053	Macaca_fascicularis
ENSEEUG00000005992	-	88	73.684	ENSMMUG00000019746	YARS	88	73.684	Macaca_mulatta
ENSEEUG00000005992	-	72	73.684	ENSMNEG00000031865	YARS	74	73.684	Macaca_nemestrina
ENSEEUG00000005992	-	88	73.421	ENSMLEG00000041315	YARS	94	73.421	Mandrillus_leucophaeus
ENSEEUG00000005992	-	73	72.185	ENSMAMG00000006092	yars	88	61.979	Mastacembelus_armatus
ENSEEUG00000005992	-	72	69.000	ENSMZEG00005011426	yars	88	58.701	Maylandia_zebra
ENSEEUG00000005992	-	86	66.578	ENSMGAG00000005063	YARS	86	66.578	Meleagris_gallopavo
ENSEEUG00000005992	-	85	72.329	ENSMAUG00000021126	Yars	87	72.329	Mesocricetus_auratus
ENSEEUG00000005992	-	88	74.211	ENSMICG00000011204	YARS	88	74.211	Microcebus_murinus
ENSEEUG00000005992	-	88	72.895	ENSMOCG00000011342	Yars	82	72.895	Microtus_ochrogaster
ENSEEUG00000005992	-	89	72.185	ENSMMOG00000021133	yars	100	52.841	Mola_mola
ENSEEUG00000005992	-	87	71.316	ENSMODG00000017404	YARS	87	71.316	Monodelphis_domestica
ENSEEUG00000005992	-	54	71.228	ENSMALG00000003648	yars	78	71.228	Monopterus_albus
ENSEEUG00000005992	-	88	73.684	MGP_CAROLIEiJ_G0026513	Yars	82	73.684	Mus_caroli
ENSEEUG00000005992	-	88	73.684	ENSMUSG00000028811	Yars	82	73.684	Mus_musculus
ENSEEUG00000005992	-	88	73.421	MGP_PahariEiJ_G0028844	Yars	82	73.421	Mus_pahari
ENSEEUG00000005992	-	88	73.684	MGP_SPRETEiJ_G0027493	Yars	82	73.684	Mus_spretus
ENSEEUG00000005992	-	88	73.684	ENSMLUG00000000759	YARS	88	73.684	Myotis_lucifugus
ENSEEUG00000005992	-	86	69.624	ENSNGAG00000001419	Yars	87	71.191	Nannospalax_galili
ENSEEUG00000005992	-	72	70.333	ENSNBRG00000020413	yars	88	60.263	Neolamprologus_brichardi
ENSEEUG00000005992	-	87	73.947	ENSNLEG00000002922	YARS	94	72.576	Nomascus_leucogenys
ENSEEUG00000005992	-	88	66.316	ENSOPRG00000003669	YARS	88	66.316	Ochotona_princeps
ENSEEUG00000005992	-	88	72.105	ENSODEG00000005363	YARS	82	72.105	Octodon_degus
ENSEEUG00000005992	-	72	70.333	ENSONIG00000015400	yars	88	59.690	Oreochromis_niloticus
ENSEEUG00000005992	-	66	82.979	ENSOANG00000011779	YARS	71	82.979	Ornithorhynchus_anatinus
ENSEEUG00000005992	-	88	74.737	ENSOCUG00000010007	YARS	88	74.737	Oryctolagus_cuniculus
ENSEEUG00000005992	-	66	74.468	ENSORLG00000013982	yars	79	74.468	Oryzias_latipes
ENSEEUG00000005992	-	73	72.185	ENSORLG00020020750	yars	88	62.141	Oryzias_latipes_hni
ENSEEUG00000005992	-	73	72.848	ENSORLG00015008963	yars	88	62.338	Oryzias_latipes_hsok
ENSEEUG00000005992	-	81	74.468	ENSOMEG00000013016	yars	95	70.513	Oryzias_melastigma
ENSEEUG00000005992	-	88	73.947	ENSOGAG00000007359	YARS	88	73.947	Otolemur_garnettii
ENSEEUG00000005992	-	87	72.368	ENSOARG00000020897	YARS	81	72.368	Ovis_aries
ENSEEUG00000005992	-	88	73.947	ENSPPAG00000035791	YARS	87	71.277	Pan_paniscus
ENSEEUG00000005992	-	88	74.474	ENSPPRG00000023768	YARS	88	74.474	Panthera_pardus
ENSEEUG00000005992	-	88	74.474	ENSPTIG00000003438	YARS	88	74.474	Panthera_tigris_altaica
ENSEEUG00000005992	-	88	73.947	ENSPTRG00000000491	YARS	88	73.947	Pan_troglodytes
ENSEEUG00000005992	-	88	73.421	ENSPANG00000009804	YARS	94	67.454	Papio_anubis
ENSEEUG00000005992	-	88	63.421	ENSPKIG00000024596	yars	88	63.421	Paramormyrops_kingsleyae
ENSEEUG00000005992	-	72	67.368	ENSPSIG00000006945	YARS	78	67.368	Pelodiscus_sinensis
ENSEEUG00000005992	-	88	59.737	ENSPMGG00000022917	yars	88	59.737	Periophthalmus_magnuspinnatus
ENSEEUG00000005992	-	87	73.421	ENSPEMG00000010746	Yars	82	73.421	Peromyscus_maniculatus_bairdii
ENSEEUG00000005992	-	87	72.368	ENSPCIG00000022457	YARS	87	72.368	Phascolarctos_cinereus
ENSEEUG00000005992	-	72	71.572	ENSPFOG00000014808	yars	88	60.417	Poecilia_formosa
ENSEEUG00000005992	-	72	71.572	ENSPLAG00000020075	yars	88	60.417	Poecilia_latipinna
ENSEEUG00000005992	-	72	71.572	ENSPMEG00000002803	yars	78	72.340	Poecilia_mexicana
ENSEEUG00000005992	-	72	71.572	ENSPREG00000018280	yars	88	61.053	Poecilia_reticulata
ENSEEUG00000005992	-	88	73.107	ENSPPYG00000001585	YARS	88	73.107	Pongo_abelii
ENSEEUG00000005992	-	61	96.552	ENSPCAG00000011170	YARS	61	96.552	Procavia_capensis
ENSEEUG00000005992	-	88	73.684	ENSPCOG00000021026	YARS	88	73.684	Propithecus_coquereli
ENSEEUG00000005992	-	88	72.368	ENSPVAG00000010984	YARS	88	72.368	Pteropus_vampyrus
ENSEEUG00000005992	-	72	70.000	ENSPNYG00000000860	yars	88	60.000	Pundamilia_nyererei
ENSEEUG00000005992	-	88	63.780	ENSPNAG00000009622	yars	88	63.780	Pygocentrus_nattereri
ENSEEUG00000005992	-	88	72.105	ENSRNOG00000007213	Yars	82	72.105	Rattus_norvegicus
ENSEEUG00000005992	-	88	73.684	ENSRROG00000039913	YARS	94	73.684	Rhinopithecus_roxellana
ENSEEUG00000005992	-	88	73.158	ENSSBOG00000030205	YARS	88	73.158	Saimiri_boliviensis_boliviensis
ENSEEUG00000005992	-	88	70.000	ENSSHAG00000011851	YARS	88	70.000	Sarcophilus_harrisii
ENSEEUG00000005992	-	88	64.211	ENSSFOG00015007179	yars	88	64.211	Scleropages_formosus
ENSEEUG00000005992	-	73	68.212	ENSSMAG00000020736	yars	74	68.212	Scophthalmus_maximus
ENSEEUG00000005992	-	73	72.517	ENSSDUG00000001782	yars	88	62.304	Seriola_dumerili
ENSEEUG00000005992	-	88	62.632	ENSSLDG00000008268	yars	88	62.632	Seriola_lalandi_dorsalis
ENSEEUG00000005992	-	73	98.535	ENSSARG00000012227	-	74	98.535	Sorex_araneus
ENSEEUG00000005992	-	87	66.842	ENSSPUG00000000333	YARS	87	66.842	Sphenodon_punctatus
ENSEEUG00000005992	-	88	56.283	ENSSPAG00000020632	yars	84	60.881	Stegastes_partitus
ENSEEUG00000005992	-	88	73.421	ENSSSCG00000030369	YARS	88	73.421	Sus_scrofa
ENSEEUG00000005992	-	87	68.421	ENSTGUG00000001342	YARS	87	68.421	Taeniopygia_guttata
ENSEEUG00000005992	-	80	78.723	ENSTRUG00000014099	yars	80	78.723	Takifugu_rubripes
ENSEEUG00000005992	-	87	62.105	ENSTNIG00000009237	yars	87	62.105	Tetraodon_nigroviridis
ENSEEUG00000005992	-	64	81.625	ENSTBEG00000014374	YARS	66	81.625	Tupaia_belangeri
ENSEEUG00000005992	-	88	73.684	ENSTTRG00000014987	YARS	88	73.684	Tursiops_truncatus
ENSEEUG00000005992	-	88	74.474	ENSUAMG00000000392	YARS	80	83.775	Ursus_americanus
ENSEEUG00000005992	-	72	74.474	ENSUMAG00000008312	YARS	69	74.474	Ursus_maritimus
ENSEEUG00000005992	-	73	94.059	ENSVPAG00000010958	YARS	73	94.059	Vicugna_pacos
ENSEEUG00000005992	-	88	73.947	ENSVVUG00000015468	YARS	87	72.452	Vulpes_vulpes
ENSEEUG00000005992	-	87	63.158	ENSXETG00000027865	yars	87	63.158	Xenopus_tropicalis
ENSEEUG00000005992	-	66	71.237	ENSXMAG00000016348	yars	70	70.213	Xiphophorus_maculatus