EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000006127 (Gene tree)
Gene ID: -
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 21621 bases
Position: chrGeneScaffold_8120:16058-37678
Accession: 19950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005589	RRM_1	PF00076.22	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000006124	RDM1-201	750	-	ENSEEUP00000005589	249 (aa)	-	UPI0000F62001

Gene Model

Click here to download ENSEEUG00000006127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000006127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000006127	RDM1	100	72.619	ENSG00000278023	RDM1	94	81.188	Homo_sapiens
ENSEEUG00000006127	RDM1	90	33.628	ENSAPOG00000021886	zgc:103564	82	33.628	Acanthochromis_polyacanthus
ENSEEUG00000006127	RDM1	80	35.468	ENSAPEG00000008929	zgc:103564	75	35.468	Amphiprion_percula
ENSEEUG00000006127	RDM1	97	51.210	ENSAPLG00000004384	RDM1	94	51.210	Anas_platyrhynchos
ENSEEUG00000006127	RDM1	97	45.344	ENSACAG00000012989	-	90	46.371	Anolis_carolinensis
ENSEEUG00000006127	RDM1	100	71.825	ENSANAG00000032752	RDM1	81	82.178	Aotus_nancymaae
ENSEEUG00000006127	RDM1	100	73.518	ENSBTAG00000000030	RDM1	89	73.518	Bos_taurus
ENSEEUG00000006127	RDM1	91	72.926	ENSCJAG00000015031	RDM1	85	73.822	Callithrix_jacchus
ENSEEUG00000006127	RDM1	86	72.273	ENSCAFG00000015160	-	86	72.273	Canis_familiaris
ENSEEUG00000006127	RDM1	99	73.200	ENSCHIG00000020607	RDM1	89	73.200	Capra_hircus
ENSEEUG00000006127	RDM1	100	59.921	ENSCPOG00000001495	-	87	59.921	Cavia_porcellus
ENSEEUG00000006127	RDM1	95	69.583	ENSCCAG00000035763	RDM1	81	81.188	Cebus_capucinus
ENSEEUG00000006127	RDM1	100	73.810	ENSCATG00000044451	RDM1	81	82.178	Cercocebus_atys
ENSEEUG00000006127	RDM1	100	72.619	ENSCSAG00000006209	RDM1	96	72.619	Chlorocebus_sabaeus
ENSEEUG00000006127	RDM1	88	53.571	ENSCPBG00000009105	RDM1	95	52.000	Chrysemys_picta_bellii
ENSEEUG00000006127	RDM1	100	73.413	ENSCANG00000041322	RDM1	86	81.188	Colobus_angolensis_palliatus
ENSEEUG00000006127	RDM1	95	69.874	ENSCGRG00001015927	Rdm1	87	70.040	Cricetulus_griseus_chok1gshd
ENSEEUG00000006127	RDM1	87	35.160	ENSCVAG00000001956	zgc:103564	79	35.160	Cyprinodon_variegatus
ENSEEUG00000006127	RDM1	100	73.810	ENSDNOG00000045224	-	94	73.810	Dasypus_novemcinctus
ENSEEUG00000006127	RDM1	76	74.611	ENSEASG00005010554	RDM1	69	74.611	Equus_asinus_asinus
ENSEEUG00000006127	RDM1	100	73.333	ENSECAG00000022182	RDM1	79	74.439	Equus_caballus
ENSEEUG00000006127	RDM1	78	78.462	ENSFCAG00000043429	RDM1	92	78.462	Felis_catus
ENSEEUG00000006127	RDM1	97	52.459	ENSGALG00000000243	RDM1	86	52.459	Gallus_gallus
ENSEEUG00000006127	RDM1	88	53.571	ENSGAGG00000000293	-	78	52.400	Gopherus_agassizii
ENSEEUG00000006127	RDM1	100	73.413	ENSGGOG00000010584	RDM1	89	73.413	Gorilla_gorilla
ENSEEUG00000006127	RDM1	86	37.615	ENSHCOG00000002518	-	78	38.073	Hippocampus_comes
ENSEEUG00000006127	RDM1	100	70.238	ENSSTOG00000022491	RDM1	89	70.238	Ictidomys_tridecemlineatus
ENSEEUG00000006127	RDM1	99	70.635	ENSLAFG00000029300	RDM1	88	70.635	Loxodonta_africana
ENSEEUG00000006127	RDM1	100	73.413	ENSMFAG00000032968	RDM1	81	82.178	Macaca_fascicularis
ENSEEUG00000006127	RDM1	100	73.810	ENSMMUG00000006847	RDM1	86	82.178	Macaca_mulatta
ENSEEUG00000006127	RDM1	100	73.413	ENSMNEG00000039977	RDM1	81	82.178	Macaca_nemestrina
ENSEEUG00000006127	RDM1	100	73.413	ENSMLEG00000041158	RDM1	86	82.178	Mandrillus_leucophaeus
ENSEEUG00000006127	RDM1	97	53.689	ENSMGAG00000008774	RDM1	96	53.689	Meleagris_gallopavo
ENSEEUG00000006127	RDM1	99	69.076	ENSMAUG00000018559	Rdm1	88	69.076	Mesocricetus_auratus
ENSEEUG00000006127	RDM1	100	74.104	ENSMICG00000038651	RDM1	95	74.104	Microcebus_murinus
ENSEEUG00000006127	RDM1	94	69.328	ENSMOCG00000015095	Rdm1	86	69.328	Microtus_ochrogaster
ENSEEUG00000006127	RDM1	97	62.041	ENSMODG00000011101	RDM1	88	62.041	Monodelphis_domestica
ENSEEUG00000006127	RDM1	98	70.445	MGP_CAROLIEiJ_G0017226	Rdm1	87	70.445	Mus_caroli
ENSEEUG00000006127	RDM1	98	70.445	ENSMUSG00000010362	Rdm1	87	70.445	Mus_musculus
ENSEEUG00000006127	RDM1	98	68.826	MGP_PahariEiJ_G0018356	Rdm1	87	68.826	Mus_pahari
ENSEEUG00000006127	RDM1	98	70.040	MGP_SPRETEiJ_G0018069	Rdm1	87	70.040	Mus_spretus
ENSEEUG00000006127	RDM1	100	75.197	ENSMPUG00000008363	RDM1	89	75.197	Mustela_putorius_furo
ENSEEUG00000006127	RDM1	100	75.000	ENSNLEG00000014173	RDM1	87	84.158	Nomascus_leucogenys
ENSEEUG00000006127	RDM1	87	60.550	ENSMEUG00000015826	RDM1	87	60.550	Notamacropus_eugenii
ENSEEUG00000006127	RDM1	89	68.584	ENSOCUG00000022704	RDM1	87	68.584	Oryctolagus_cuniculus
ENSEEUG00000006127	RDM1	100	74.206	ENSOGAG00000011332	RDM1	89	74.206	Otolemur_garnettii
ENSEEUG00000006127	RDM1	100	74.603	ENSPPAG00000029969	RDM1	89	74.603	Pan_paniscus
ENSEEUG00000006127	RDM1	100	74.206	ENSPTRG00000009031	RDM1	89	74.206	Pan_troglodytes
ENSEEUG00000006127	RDM1	100	74.206	ENSPANG00000022933	RDM1	81	83.168	Papio_anubis
ENSEEUG00000006127	RDM1	95	69.038	ENSPEMG00000018985	Rdm1	88	68.826	Peromyscus_maniculatus_bairdii
ENSEEUG00000006127	RDM1	100	73.705	ENSPPYG00000008198	RDM1	89	73.705	Pongo_abelii
ENSEEUG00000006127	RDM1	100	71.825	ENSPCOG00000017995	RDM1	89	71.825	Propithecus_coquereli
ENSEEUG00000006127	RDM1	87	75.342	ENSPVAG00000001116	RDM1	87	75.342	Pteropus_vampyrus
ENSEEUG00000006127	RDM1	98	69.231	ENSRNOG00000020751	Rdm1	87	69.231	Rattus_norvegicus
ENSEEUG00000006127	RDM1	100	73.413	ENSRBIG00000030000	RDM1	81	82.178	Rhinopithecus_bieti
ENSEEUG00000006127	RDM1	100	73.413	ENSRROG00000035242	RDM1	86	82.178	Rhinopithecus_roxellana
ENSEEUG00000006127	RDM1	97	63.786	ENSSHAG00000013584	RDM1	88	63.786	Sarcophilus_harrisii
ENSEEUG00000006127	RDM1	91	50.427	ENSSPUG00000010941	RDM1	85	50.427	Sphenodon_punctatus
ENSEEUG00000006127	RDM1	88	35.268	ENSSPAG00000011690	-	81	36.161	Stegastes_partitus
ENSEEUG00000006127	RDM1	95	62.917	ENSSSCG00000017574	-	93	62.917	Sus_scrofa
ENSEEUG00000006127	RDM1	100	54.980	ENSTBEG00000010030	RDM1	99	54.980	Tupaia_belangeri
ENSEEUG00000006127	RDM1	100	76.587	ENSUAMG00000027279	RDM1	89	76.587	Ursus_americanus
ENSEEUG00000006127	RDM1	100	76.587	ENSUMAG00000015423	RDM1	87	76.587	Ursus_maritimus