EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000006251 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 15866 bases
Position: chrGeneScaffold_1327:1116-16981
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005715	RtcB	PF01139.17	1.8e-128	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000006261	RTCB-201	1344	-	ENSEEUP00000005715	447 (aa)	-	UPI0000F61C4A

Gene Model

Click here to download ENSEEUG00000006251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000006251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000006251	RTCB	100	90.157	ENSG00000100220	RTCB	89	90.157	Homo_sapiens
ENSEEUG00000006251	RTCB	100	85.906	ENSAPOG00000006040	rtcb	89	85.906	Acanthochromis_polyacanthus
ENSEEUG00000006251	RTCB	100	89.933	ENSAMEG00000016152	RTCB	89	89.933	Ailuropoda_melanoleuca
ENSEEUG00000006251	RTCB	95	85.647	ENSACIG00000009083	rtcb	88	85.647	Amphilophus_citrinellus
ENSEEUG00000006251	RTCB	100	85.906	ENSAOCG00000005662	rtcb	97	85.906	Amphiprion_ocellaris
ENSEEUG00000006251	RTCB	100	82.550	ENSAPEG00000024653	rtcb	92	82.550	Amphiprion_percula
ENSEEUG00000006251	RTCB	100	85.906	ENSAPEG00000024701	rtcb	89	85.906	Amphiprion_percula
ENSEEUG00000006251	RTCB	100	85.682	ENSATEG00000000618	rtcb	89	85.682	Anabas_testudineus
ENSEEUG00000006251	RTCB	99	88.117	ENSACAG00000014817	RTCB	86	88.117	Anolis_carolinensis
ENSEEUG00000006251	RTCB	100	74.944	ENSANAG00000018191	-	80	74.944	Aotus_nancymaae
ENSEEUG00000006251	RTCB	69	94.286	ENSANAG00000023724	-	69	94.286	Aotus_nancymaae
ENSEEUG00000006251	RTCB	100	84.787	ENSACLG00000008367	rtcb	97	84.787	Astatotilapia_calliptera
ENSEEUG00000006251	RTCB	99	85.202	ENSAMXG00000042320	rtcb	88	85.202	Astyanax_mexicanus
ENSEEUG00000006251	RTCB	100	90.157	ENSBTAG00000011070	RTCB	89	90.157	Bos_taurus
ENSEEUG00000006251	RTCB	100	69.575	WBGene00008877	rtcb-1	89	69.575	Caenorhabditis_elegans
ENSEEUG00000006251	RTCB	100	89.933	ENSCJAG00000006128	RTCB	89	89.933	Callithrix_jacchus
ENSEEUG00000006251	RTCB	100	89.933	ENSCAFG00000001785	RTCB	89	89.933	Canis_familiaris
ENSEEUG00000006251	RTCB	99	86.261	ENSCAFG00000010789	-	89	86.353	Canis_familiaris
ENSEEUG00000006251	RTCB	83	95.935	ENSCAFG00020018953	-	84	95.968	Canis_lupus_dingo
ENSEEUG00000006251	RTCB	100	89.933	ENSCAFG00020004890	-	89	89.933	Canis_lupus_dingo
ENSEEUG00000006251	RTCB	51	59.389	ENSCHIG00000017428	-	100	59.389	Capra_hircus
ENSEEUG00000006251	RTCB	100	90.157	ENSCHIG00000027009	-	89	90.157	Capra_hircus
ENSEEUG00000006251	RTCB	100	89.933	ENSTSYG00000012320	RTCB	89	89.933	Carlito_syrichta
ENSEEUG00000006251	RTCB	100	89.933	ENSCAPG00000011647	RTCB	90	89.933	Cavia_aperea
ENSEEUG00000006251	RTCB	100	89.933	ENSCCAG00000000618	RTCB	89	89.933	Cebus_capucinus
ENSEEUG00000006251	RTCB	100	89.933	ENSCATG00000033424	RTCB	89	89.933	Cercocebus_atys
ENSEEUG00000006251	RTCB	100	89.933	ENSCLAG00000007997	RTCB	89	89.933	Chinchilla_lanigera
ENSEEUG00000006251	RTCB	100	89.933	ENSCSAG00000008351	RTCB	89	89.933	Chlorocebus_sabaeus
ENSEEUG00000006251	RTCB	100	73.826	ENSCHOG00000009123	RTCB	88	73.826	Choloepus_hoffmanni
ENSEEUG00000006251	RTCB	99	88.789	ENSCPBG00000023184	RTCB	88	88.789	Chrysemys_picta_bellii
ENSEEUG00000006251	RTCB	100	77.405	ENSCING00000003830	-	89	77.405	Ciona_intestinalis
ENSEEUG00000006251	RTCB	99	77.354	ENSCSAVG00000008124	-	100	72.665	Ciona_savignyi
ENSEEUG00000006251	RTCB	100	84.233	ENSCANG00000001891	RTCB	88	84.233	Colobus_angolensis_palliatus
ENSEEUG00000006251	RTCB	100	89.933	ENSCGRG00001011173	Rtcb	89	89.933	Cricetulus_griseus_chok1gshd
ENSEEUG00000006251	RTCB	100	89.933	ENSCGRG00000009587	-	91	89.933	Cricetulus_griseus_crigri
ENSEEUG00000006251	RTCB	100	84.787	ENSCSEG00000003986	rtcb	89	84.787	Cynoglossus_semilaevis
ENSEEUG00000006251	RTCB	82	94.795	ENSCVAG00000000569	rtcb	83	94.795	Cyprinodon_variegatus
ENSEEUG00000006251	RTCB	99	84.978	ENSDARG00000101047	rtcb	88	84.978	Danio_rerio
ENSEEUG00000006251	RTCB	78	95.989	ENSDNOG00000012425	RTCB	86	95.989	Dasypus_novemcinctus
ENSEEUG00000006251	RTCB	100	89.262	ENSDORG00000010855	Rtcb	89	89.262	Dipodomys_ordii
ENSEEUG00000006251	RTCB	100	79.418	FBgn0032781	RtcB	88	79.418	Drosophila_melanogaster
ENSEEUG00000006251	RTCB	100	82.774	ENSETEG00000001988	RTCB	89	82.774	Echinops_telfairi
ENSEEUG00000006251	RTCB	99	77.130	ENSEBUG00000014235	rtcb	88	77.130	Eptatretus_burgeri
ENSEEUG00000006251	RTCB	100	90.157	ENSEASG00005019059	RTCB	89	90.157	Equus_asinus_asinus
ENSEEUG00000006251	RTCB	100	90.157	ENSECAG00000023998	RTCB	89	90.157	Equus_caballus
ENSEEUG00000006251	RTCB	99	73.191	ENSELUG00000009275	rtcb	88	73.191	Esox_lucius
ENSEEUG00000006251	RTCB	100	90.157	ENSFCAG00000026480	RTCB	89	90.157	Felis_catus
ENSEEUG00000006251	RTCB	99	89.462	ENSFALG00000013334	RTCB	88	89.462	Ficedula_albicollis
ENSEEUG00000006251	RTCB	100	90.157	ENSFDAG00000018150	RTCB	89	90.157	Fukomys_damarensis
ENSEEUG00000006251	RTCB	100	85.459	ENSFHEG00000009595	rtcb	89	85.459	Fundulus_heteroclitus
ENSEEUG00000006251	RTCB	99	84.081	ENSGMOG00000018882	rtcb	88	84.081	Gadus_morhua
ENSEEUG00000006251	RTCB	99	89.013	ENSGALG00000012611	RTCB	88	89.013	Gallus_gallus
ENSEEUG00000006251	RTCB	100	86.130	ENSGAFG00000004198	rtcb	89	86.130	Gambusia_affinis
ENSEEUG00000006251	RTCB	99	85.202	ENSGACG00000000586	rtcb	88	85.202	Gasterosteus_aculeatus
ENSEEUG00000006251	RTCB	83	97.574	ENSGAGG00000019133	RTCB	77	97.574	Gopherus_agassizii
ENSEEUG00000006251	RTCB	100	90.157	ENSGGOG00000011402	RTCB	89	90.157	Gorilla_gorilla
ENSEEUG00000006251	RTCB	100	84.787	ENSHBUG00000020571	rtcb	89	84.787	Haplochromis_burtoni
ENSEEUG00000006251	RTCB	100	90.157	ENSHGLG00000004492	RTCB	89	90.157	Heterocephalus_glaber_female
ENSEEUG00000006251	RTCB	99	65.479	ENSHGLG00000001066	-	95	65.479	Heterocephalus_glaber_female
ENSEEUG00000006251	RTCB	100	90.157	ENSHGLG00100008965	RTCB	89	90.157	Heterocephalus_glaber_male
ENSEEUG00000006251	RTCB	100	83.964	ENSHCOG00000006450	rtcb	89	83.964	Hippocampus_comes
ENSEEUG00000006251	RTCB	100	85.682	ENSIPUG00000015443	rtcb	89	85.682	Ictalurus_punctatus
ENSEEUG00000006251	RTCB	100	89.933	ENSSTOG00000003878	RTCB	89	89.933	Ictidomys_tridecemlineatus
ENSEEUG00000006251	RTCB	100	89.485	ENSJJAG00000010667	Rtcb	89	89.485	Jaculus_jaculus
ENSEEUG00000006251	RTCB	100	85.906	ENSKMAG00000013178	rtcb	89	85.906	Kryptolebias_marmoratus
ENSEEUG00000006251	RTCB	100	85.682	ENSLBEG00000010566	RTCB	89	85.682	Labrus_bergylta
ENSEEUG00000006251	RTCB	100	84.564	ENSLBEG00000000214	rtcb	88	84.564	Labrus_bergylta
ENSEEUG00000006251	RTCB	99	87.220	ENSLACG00000013033	RTCB	88	87.220	Latimeria_chalumnae
ENSEEUG00000006251	RTCB	99	85.874	ENSLOCG00000016515	rtcb	88	85.874	Lepisosteus_oculatus
ENSEEUG00000006251	RTCB	100	89.262	ENSLAFG00000002082	RTCB	89	89.262	Loxodonta_africana
ENSEEUG00000006251	RTCB	100	89.933	ENSMFAG00000034419	RTCB	89	89.933	Macaca_fascicularis
ENSEEUG00000006251	RTCB	100	89.933	ENSMMUG00000006720	RTCB	89	89.933	Macaca_mulatta
ENSEEUG00000006251	RTCB	100	89.933	ENSMNEG00000040669	RTCB	89	89.933	Macaca_nemestrina
ENSEEUG00000006251	RTCB	100	89.933	ENSMLEG00000040505	RTCB	89	89.933	Mandrillus_leucophaeus
ENSEEUG00000006251	RTCB	100	85.682	ENSMAMG00000020676	rtcb	89	85.682	Mastacembelus_armatus
ENSEEUG00000006251	RTCB	100	84.787	ENSMZEG00005018942	rtcb	89	84.787	Maylandia_zebra
ENSEEUG00000006251	RTCB	99	88.616	ENSMGAG00000012805	RTCB	88	88.616	Meleagris_gallopavo
ENSEEUG00000006251	RTCB	61	99.379	ENSMAUG00000008301	Rtcb	91	99.379	Mesocricetus_auratus
ENSEEUG00000006251	RTCB	100	90.157	ENSMICG00000013303	-	89	90.157	Microcebus_murinus
ENSEEUG00000006251	RTCB	100	71.812	ENSMICG00000036677	-	87	71.812	Microcebus_murinus
ENSEEUG00000006251	RTCB	100	89.709	ENSMOCG00000002440	Rtcb	89	89.709	Microtus_ochrogaster
ENSEEUG00000006251	RTCB	100	86.130	ENSMMOG00000005987	rtcb	89	86.130	Mola_mola
ENSEEUG00000006251	RTCB	100	89.485	ENSMODG00000001414	RTCB	89	89.485	Monodelphis_domestica
ENSEEUG00000006251	RTCB	100	85.682	ENSMALG00000007603	rtcb	89	85.682	Monopterus_albus
ENSEEUG00000006251	RTCB	100	89.933	MGP_CAROLIEiJ_G0015689	Rtcb	89	89.933	Mus_caroli
ENSEEUG00000006251	RTCB	100	89.933	ENSMUSG00000001783	Rtcb	89	89.933	Mus_musculus
ENSEEUG00000006251	RTCB	100	89.933	MGP_PahariEiJ_G0031396	Rtcb	89	89.933	Mus_pahari
ENSEEUG00000006251	RTCB	100	89.933	MGP_SPRETEiJ_G0016507	Rtcb	89	89.933	Mus_spretus
ENSEEUG00000006251	RTCB	100	89.933	ENSMPUG00000012285	RTCB	89	89.933	Mustela_putorius_furo
ENSEEUG00000006251	RTCB	100	89.262	ENSMLUG00000007803	RTCB	88	89.262	Myotis_lucifugus
ENSEEUG00000006251	RTCB	62	94.286	ENSNGAG00000005093	Rtcb	82	94.286	Nannospalax_galili
ENSEEUG00000006251	RTCB	100	85.011	ENSNBRG00000017202	rtcb	89	85.011	Neolamprologus_brichardi
ENSEEUG00000006251	RTCB	100	90.157	ENSNLEG00000004960	RTCB	89	90.157	Nomascus_leucogenys
ENSEEUG00000006251	RTCB	87	69.565	ENSMEUG00000007809	-	77	69.565	Notamacropus_eugenii
ENSEEUG00000006251	RTCB	61	97.048	ENSOPRG00000003488	RTCB	58	97.048	Ochotona_princeps
ENSEEUG00000006251	RTCB	100	60.850	ENSODEG00000005042	-	86	60.850	Octodon_degus
ENSEEUG00000006251	RTCB	89	87.544	ENSODEG00000013033	-	93	87.544	Octodon_degus
ENSEEUG00000006251	RTCB	100	85.906	ENSONIG00000007474	rtcb	89	85.906	Oreochromis_niloticus
ENSEEUG00000006251	RTCB	99	89.686	ENSOANG00000005524	RTCB	88	89.686	Ornithorhynchus_anatinus
ENSEEUG00000006251	RTCB	83	98.925	ENSOCUG00000008270	RTCB	76	98.925	Oryctolagus_cuniculus
ENSEEUG00000006251	RTCB	100	85.235	ENSORLG00000020093	rtcb	89	85.235	Oryzias_latipes
ENSEEUG00000006251	RTCB	100	85.235	ENSORLG00020003706	rtcb	94	85.235	Oryzias_latipes_hni
ENSEEUG00000006251	RTCB	100	85.459	ENSORLG00015002968	rtcb	89	85.459	Oryzias_latipes_hsok
ENSEEUG00000006251	RTCB	100	85.011	ENSOMEG00000021278	rtcb	89	85.011	Oryzias_melastigma
ENSEEUG00000006251	RTCB	100	89.709	ENSOGAG00000001425	RTCB	89	89.709	Otolemur_garnettii
ENSEEUG00000006251	RTCB	100	90.157	ENSOARG00000018008	RTCB	89	90.157	Ovis_aries
ENSEEUG00000006251	RTCB	100	90.157	ENSPPAG00000028667	RTCB	89	90.157	Pan_paniscus
ENSEEUG00000006251	RTCB	100	90.157	ENSPPRG00000004038	RTCB	89	90.157	Panthera_pardus
ENSEEUG00000006251	RTCB	100	86.353	ENSPTIG00000020499	RTCB	92	86.353	Panthera_tigris_altaica
ENSEEUG00000006251	RTCB	100	90.157	ENSPTRG00000014287	RTCB	89	90.157	Pan_troglodytes
ENSEEUG00000006251	RTCB	100	89.933	ENSPANG00000016035	RTCB	89	89.933	Papio_anubis
ENSEEUG00000006251	RTCB	99	84.978	ENSPKIG00000001881	rtcb	88	84.978	Paramormyrops_kingsleyae
ENSEEUG00000006251	RTCB	99	88.789	ENSPSIG00000011690	RTCB	97	88.789	Pelodiscus_sinensis
ENSEEUG00000006251	RTCB	100	86.130	ENSPMGG00000016672	rtcb	89	86.130	Periophthalmus_magnuspinnatus
ENSEEUG00000006251	RTCB	100	89.933	ENSPEMG00000019548	Rtcb	89	89.933	Peromyscus_maniculatus_bairdii
ENSEEUG00000006251	RTCB	100	83.221	ENSPMAG00000005657	rtcb	89	83.221	Petromyzon_marinus
ENSEEUG00000006251	RTCB	100	89.709	ENSPCIG00000009467	RTCB	89	89.709	Phascolarctos_cinereus
ENSEEUG00000006251	RTCB	100	86.353	ENSPFOG00000003058	rtcb	89	86.353	Poecilia_formosa
ENSEEUG00000006251	RTCB	99	86.323	ENSPLAG00000017663	rtcb	88	86.323	Poecilia_latipinna
ENSEEUG00000006251	RTCB	100	86.353	ENSPMEG00000006227	rtcb	89	86.353	Poecilia_mexicana
ENSEEUG00000006251	RTCB	100	86.130	ENSPREG00000018467	rtcb	89	86.130	Poecilia_reticulata
ENSEEUG00000006251	RTCB	100	90.157	ENSPPYG00000011752	RTCB	89	90.157	Pongo_abelii
ENSEEUG00000006251	RTCB	83	76.738	ENSPCAG00000013641	RTCB	79	76.738	Procavia_capensis
ENSEEUG00000006251	RTCB	100	90.157	ENSPCOG00000017243	RTCB	89	90.157	Propithecus_coquereli
ENSEEUG00000006251	RTCB	83	98.649	ENSPVAG00000002380	RTCB	79	98.649	Pteropus_vampyrus
ENSEEUG00000006251	RTCB	100	84.787	ENSPNYG00000022760	rtcb	89	84.787	Pundamilia_nyererei
ENSEEUG00000006251	RTCB	99	85.874	ENSPNAG00000009209	rtcb	90	85.843	Pygocentrus_nattereri
ENSEEUG00000006251	RTCB	100	89.933	ENSRNOG00000004813	Rtcb	89	89.933	Rattus_norvegicus
ENSEEUG00000006251	RTCB	100	80.134	ENSRBIG00000042090	RTCB	88	80.134	Rhinopithecus_bieti
ENSEEUG00000006251	RTCB	100	86.801	ENSSBOG00000020085	-	90	86.801	Saimiri_boliviensis_boliviensis
ENSEEUG00000006251	RTCB	100	89.933	ENSSHAG00000016277	RTCB	94	89.933	Sarcophilus_harrisii
ENSEEUG00000006251	RTCB	100	84.340	ENSSFOG00015011572	RTCB	89	84.340	Scleropages_formosus
ENSEEUG00000006251	RTCB	99	84.978	ENSSFOG00015000763	rtcb	88	84.978	Scleropages_formosus
ENSEEUG00000006251	RTCB	99	84.081	ENSSMAG00000005096	rtcb	88	82.063	Scophthalmus_maximus
ENSEEUG00000006251	RTCB	100	85.235	ENSSDUG00000012605	rtcb	89	85.235	Seriola_dumerili
ENSEEUG00000006251	RTCB	100	85.235	ENSSLDG00000019458	rtcb	89	85.235	Seriola_lalandi_dorsalis
ENSEEUG00000006251	RTCB	64	94.286	ENSSARG00000004799	-	60	94.286	Sorex_araneus
ENSEEUG00000006251	RTCB	99	87.892	ENSSPUG00000012814	RTCB	88	87.892	Sphenodon_punctatus
ENSEEUG00000006251	RTCB	100	85.906	ENSSPAG00000004623	rtcb	89	85.906	Stegastes_partitus
ENSEEUG00000006251	RTCB	100	90.157	ENSSSCG00000000158	RTCB	89	90.157	Sus_scrofa
ENSEEUG00000006251	RTCB	99	89.462	ENSTGUG00000010947	RTCB	88	89.462	Taeniopygia_guttata
ENSEEUG00000006251	RTCB	100	86.130	ENSTRUG00000009880	rtcb	97	86.130	Takifugu_rubripes
ENSEEUG00000006251	RTCB	100	84.340	ENSTNIG00000002484	rtcb	89	84.340	Tetraodon_nigroviridis
ENSEEUG00000006251	RTCB	83	97.910	ENSTBEG00000004418	RTCB	73	97.910	Tupaia_belangeri
ENSEEUG00000006251	RTCB	83	98.656	ENSTTRG00000006417	RTCB	79	98.656	Tursiops_truncatus
ENSEEUG00000006251	RTCB	100	89.933	ENSUAMG00000022792	RTCB	89	89.933	Ursus_americanus
ENSEEUG00000006251	RTCB	100	89.933	ENSUMAG00000017225	RTCB	89	89.933	Ursus_maritimus
ENSEEUG00000006251	RTCB	100	89.933	ENSVPAG00000005375	RTCB	89	89.933	Vicugna_pacos
ENSEEUG00000006251	RTCB	100	89.933	ENSVVUG00000023408	RTCB	100	88.943	Vulpes_vulpes
ENSEEUG00000006251	RTCB	99	86.323	ENSXETG00000011523	rtcb	88	86.323	Xenopus_tropicalis
ENSEEUG00000006251	RTCB	51	74.236	ENSXCOG00000011944	rtcb	100	74.236	Xiphophorus_couchianus
ENSEEUG00000006251	RTCB	100	86.130	ENSXMAG00000002855	rtcb	89	86.130	Xiphophorus_maculatus