EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSEEUG00000006286 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Erinaceus_europaeus
Status
putative
Strand
Minus strand
Length
28030 bases
Position
chrGeneScaffold_131:690-28719
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEEUP00000005763CSDPF00313.226.1e-6013
ENSEEUP00000005763CSDPF00313.226.1e-6023
ENSEEUP00000005763CSDPF00313.226.1e-6033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEEUT00000006313CSDE1-2012259-ENSEEUP00000005763753 (aa)-UPI0000F63239
Gene Model
Click here to download ENSEEUG00000006286's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000006286's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEEUG00000006286CSDE17499.476ENSG00000009307CSDE1100100.000Homo_sapiens
ENSEEUG00000006286CSDE16881.308ENSAPOG00000015538csde19381.308Acanthochromis_polyacanthus
ENSEEUG00000006286CSDE17498.953ENSAMEG00000017129CSDE19398.953Ailuropoda_melanoleuca
ENSEEUG00000006286CSDE16282.550ENSACIG00000015175csde19982.550Amphilophus_citrinellus
ENSEEUG00000006286CSDE16881.620ENSAOCG00000011510csde19381.620Amphiprion_ocellaris
ENSEEUG00000006286CSDE16881.620ENSAPEG00000007194csde19381.620Amphiprion_percula
ENSEEUG00000006286CSDE16881.931ENSATEG00000003864csde19381.931Anabas_testudineus
ENSEEUG00000006286CSDE16896.238ENSAPLG00000008797CSDE19296.238Anas_platyrhynchos
ENSEEUG00000006286CSDE16892.670ENSACAG00000003120CSDE19292.670Anolis_carolinensis
ENSEEUG00000006286CSDE17498.953ENSANAG00000024665CSDE19398.953Aotus_nancymaae
ENSEEUG00000006286CSDE16881.562ENSACLG00000013296csde19381.562Astatotilapia_calliptera
ENSEEUG00000006286CSDE16882.243ENSAMXG00000007436csde19282.243Astyanax_mexicanus
ENSEEUG00000006286CSDE17498.429ENSBTAG00000000678CSDE19398.429Bos_taurus
ENSEEUG00000006286CSDE17498.953ENSCJAG00000012565CSDE19398.953Callithrix_jacchus
ENSEEUG00000006286CSDE17499.476ENSCAFG00000009618CSDE19499.476Canis_familiaris
ENSEEUG00000006286CSDE16899.476ENSCAFG00020000481CSDE19299.476Canis_lupus_dingo
ENSEEUG00000006286CSDE17498.429ENSCHIG00000017250CSDE19398.429Capra_hircus
ENSEEUG00000006286CSDE17499.476ENSTSYG00000003747CSDE19399.476Carlito_syrichta
ENSEEUG00000006286CSDE16382.468ENSCAPG00000015128CSDE19182.468Cavia_aperea
ENSEEUG00000006286CSDE16899.476ENSCPOG00000040388CSDE19299.476Cavia_porcellus
ENSEEUG00000006286CSDE15079.679ENSCCAG00000030878-8279.679Cebus_capucinus
ENSEEUG00000006286CSDE17498.953ENSCCAG00000036794CSDE19398.953Cebus_capucinus
ENSEEUG00000006286CSDE15182.011ENSCCAG00000033677-9381.481Cebus_capucinus
ENSEEUG00000006286CSDE17499.476ENSCATG00000036962CSDE19399.476Cercocebus_atys
ENSEEUG00000006286CSDE16899.476ENSCLAG00000006618CSDE19299.476Chinchilla_lanigera
ENSEEUG00000006286CSDE17499.476ENSCSAG00000001658CSDE19399.476Chlorocebus_sabaeus
ENSEEUG00000006286CSDE174100.000ENSCHOG00000000918CSDE187100.000Choloepus_hoffmanni
ENSEEUG00000006286CSDE17492.147ENSCPBG00000016547CSDE19295.925Chrysemys_picta_bellii
ENSEEUG00000006286CSDE17343.314ENSCING00000014465-9143.314Ciona_intestinalis
ENSEEUG00000006286CSDE16546.667ENSCSAVG00000008100-9545.395Ciona_savignyi
ENSEEUG00000006286CSDE17499.476ENSCANG00000035096CSDE19399.476Colobus_angolensis_palliatus
ENSEEUG00000006286CSDE15996.154ENSCANG00000031069-9396.154Colobus_angolensis_palliatus
ENSEEUG00000006286CSDE16883.246ENSCGRG00001014011-9183.246Cricetulus_griseus_chok1gshd
ENSEEUG00000006286CSDE16897.906ENSCGRG00001016833-9297.906Cricetulus_griseus_chok1gshd
ENSEEUG00000006286CSDE15684.348ENSCGRG00000005831-9184.348Cricetulus_griseus_crigri
ENSEEUG00000006286CSDE16297.906ENSCGRG00000002225-8697.906Cricetulus_griseus_crigri
ENSEEUG00000006286CSDE16881.250ENSCSEG00000002620csde19381.250Cynoglossus_semilaevis
ENSEEUG00000006286CSDE16882.243ENSCVAG00000001344csde19382.243Cyprinodon_variegatus
ENSEEUG00000006286CSDE17375.916ENSDARG00000074758csde19982.000Danio_rerio
ENSEEUG00000006286CSDE17099.476ENSDNOG00000010287-8899.476Dasypus_novemcinctus
ENSEEUG00000006286CSDE15477.895ENSDNOG00000034464-10077.895Dasypus_novemcinctus
ENSEEUG00000006286CSDE16897.906ENSDORG00000011609Csde19297.906Dipodomys_ordii
ENSEEUG00000006286CSDE16750.456FBgn0263352Unr7150.150Drosophila_melanogaster
ENSEEUG00000006286CSDE16779.618ENSETEG00000013678-9279.618Echinops_telfairi
ENSEEUG00000006286CSDE17497.906ENSETEG00000002491-7097.906Echinops_telfairi
ENSEEUG00000006286CSDE15891.536ENSETEG00000006280-10091.536Echinops_telfairi
ENSEEUG00000006286CSDE16856.701ENSEBUG00000008647csde19356.701Eptatretus_burgeri
ENSEEUG00000006286CSDE17499.476ENSEASG00005006284CSDE19399.476Equus_asinus_asinus
ENSEEUG00000006286CSDE17499.476ENSECAG00000020885CSDE19399.476Equus_caballus
ENSEEUG00000006286CSDE16878.947ENSELUG00000015507csde19378.947Esox_lucius
ENSEEUG00000006286CSDE17499.476ENSFCAG00000029266CSDE19399.476Felis_catus
ENSEEUG00000006286CSDE16892.670ENSFALG00000003407CSDE19292.670Ficedula_albicollis
ENSEEUG00000006286CSDE16899.476ENSFDAG00000007882CSDE19299.476Fukomys_damarensis
ENSEEUG00000006286CSDE16882.555ENSFHEG00000010799csde19482.555Fundulus_heteroclitus
ENSEEUG00000006286CSDE16774.346ENSGMOG00000012731csde19374.346Gadus_morhua
ENSEEUG00000006286CSDE16892.147ENSGALG00000002139CSDE19392.147Gallus_gallus
ENSEEUG00000006286CSDE16682.866ENSGAFG00000005241csde19582.866Gambusia_affinis
ENSEEUG00000006286CSDE16874.869ENSGACG00000004544csde19374.869Gasterosteus_aculeatus
ENSEEUG00000006286CSDE17492.147ENSGAGG00000017685CSDE19392.147Gopherus_agassizii
ENSEEUG00000006286CSDE17499.476ENSGGOG00000002164CSDE19499.476Gorilla_gorilla
ENSEEUG00000006286CSDE16881.562ENSHBUG00000020315csde19381.562Haplochromis_burtoni
ENSEEUG00000006286CSDE16097.674ENSHGLG00000010039-8697.674Heterocephalus_glaber_female
ENSEEUG00000006286CSDE16794.241ENSHGLG00000008555-9394.241Heterocephalus_glaber_female
ENSEEUG00000006286CSDE16888.482ENSHGLG00000007471-9288.482Heterocephalus_glaber_female
ENSEEUG00000006286CSDE16687.222ENSHGLG00000000650-9187.222Heterocephalus_glaber_female
ENSEEUG00000006286CSDE16888.715ENSHGLG00000003829-9288.715Heterocephalus_glaber_female
ENSEEUG00000006286CSDE16791.534ENSHGLG00000019549-9291.534Heterocephalus_glaber_female
ENSEEUG00000006286CSDE16897.492ENSHGLG00000009620-8997.492Heterocephalus_glaber_female
ENSEEUG00000006286CSDE16791.534ENSHGLG00100001846-9691.444Heterocephalus_glaber_male
ENSEEUG00000006286CSDE16883.770ENSHGLG00100012072-9483.770Heterocephalus_glaber_male
ENSEEUG00000006286CSDE16899.476ENSHGLG00100019438-9299.476Heterocephalus_glaber_male
ENSEEUG00000006286CSDE16686.667ENSHGLG00100002245-9186.667Heterocephalus_glaber_male
ENSEEUG00000006286CSDE16374.869ENSHGLG00100004833-8574.869Heterocephalus_glaber_male
ENSEEUG00000006286CSDE16894.241ENSHGLG00100004195-9994.241Heterocephalus_glaber_male
ENSEEUG00000006286CSDE16097.674ENSHGLG00100006910-8697.674Heterocephalus_glaber_male
ENSEEUG00000006286CSDE16885.580ENSHGLG00100007287-9285.580Heterocephalus_glaber_male
ENSEEUG00000006286CSDE16880.374ENSHCOG00000004158csde19380.312Hippocampus_comes
ENSEEUG00000006286CSDE16880.374ENSIPUG00000000355csde19380.374Ictalurus_punctatus
ENSEEUG00000006286CSDE16886.316ENSSTOG00000030994-9286.316Ictidomys_tridecemlineatus
ENSEEUG00000006286CSDE16694.891ENSSTOG00000032722-9894.891Ictidomys_tridecemlineatus
ENSEEUG00000006286CSDE16898.429ENSJJAG00000019571Csde19298.429Jaculus_jaculus
ENSEEUG00000006286CSDE17371.649ENSKMAG00000005685csde19374.286Kryptolebias_marmoratus
ENSEEUG00000006286CSDE16881.308ENSLBEG00000014770csde19381.308Labrus_bergylta
ENSEEUG00000006286CSDE17077.151ENSLACG00000018452CSDE19373.500Latimeria_chalumnae
ENSEEUG00000006286CSDE17476.440ENSLOCG00000010413csde18978.393Lepisosteus_oculatus
ENSEEUG00000006286CSDE17098.429ENSLAFG00000007150CSDE18998.429Loxodonta_africana
ENSEEUG00000006286CSDE17499.476ENSMFAG00000003674CSDE19399.476Macaca_fascicularis
ENSEEUG00000006286CSDE17499.476ENSMMUG00000001974CSDE19999.476Macaca_mulatta
ENSEEUG00000006286CSDE17499.476ENSMNEG00000045247CSDE19399.476Macaca_nemestrina
ENSEEUG00000006286CSDE17498.429ENSMLEG00000038673CSDE19398.429Mandrillus_leucophaeus
ENSEEUG00000006286CSDE17476.440ENSMAMG00000008821csde19381.931Mastacembelus_armatus
ENSEEUG00000006286CSDE16881.562ENSMZEG00005021675csde19381.562Maylandia_zebra
ENSEEUG00000006286CSDE16896.238ENSMGAG00000016381CSDE19296.238Meleagris_gallopavo
ENSEEUG00000006286CSDE16897.906ENSMAUG00000014031Csde19297.906Mesocricetus_auratus
ENSEEUG00000006286CSDE17499.476ENSMICG00000002050CSDE19399.476Microcebus_murinus
ENSEEUG00000006286CSDE16897.906ENSMOCG00000018960Csde19297.906Microtus_ochrogaster
ENSEEUG00000006286CSDE16881.931ENSMMOG00000015075csde19381.931Mola_mola
ENSEEUG00000006286CSDE16898.429ENSMODG00000004685CSDE19298.429Monodelphis_domestica
ENSEEUG00000006286CSDE16881.931ENSMALG00000007132csde19381.931Monopterus_albus
ENSEEUG00000006286CSDE16897.382MGP_CAROLIEiJ_G0025444Csde110096.026Mus_caroli
ENSEEUG00000006286CSDE16897.179ENSMUSG00000068823Csde110096.026Mus_musculus
ENSEEUG00000006286CSDE16897.906MGP_PahariEiJ_G0026888Csde110096.026Mus_pahari
ENSEEUG00000006286CSDE16897.906MGP_SPRETEiJ_G0026394Csde110096.026Mus_spretus
ENSEEUG00000006286CSDE16899.476ENSMPUG00000005753CSDE19499.476Mustela_putorius_furo
ENSEEUG00000006286CSDE17498.953ENSMLUG00000005681CSDE19398.953Myotis_lucifugus
ENSEEUG00000006286CSDE15076.440ENSNGAG00000012599-8576.440Nannospalax_galili
ENSEEUG00000006286CSDE16898.429ENSNGAG00000021929Csde19298.429Nannospalax_galili
ENSEEUG00000006286CSDE16881.562ENSNBRG00000020808csde19381.562Neolamprologus_brichardi
ENSEEUG00000006286CSDE17499.476ENSNLEG00000004842CSDE19399.476Nomascus_leucogenys
ENSEEUG00000006286CSDE16898.953ENSMEUG00000002677CSDE19498.953Notamacropus_eugenii
ENSEEUG00000006286CSDE17498.953ENSOPRG00000005002CSDE18298.953Ochotona_princeps
ENSEEUG00000006286CSDE16899.476ENSODEG00000007383-9299.476Octodon_degus
ENSEEUG00000006286CSDE15147.644ENSODEG00000005979-8249.738Octodon_degus
ENSEEUG00000006286CSDE16873.298ENSONIG00000009309csde19373.298Oreochromis_niloticus
ENSEEUG00000006286CSDE16687.714ENSOANG00000003346-7687.714Ornithorhynchus_anatinus
ENSEEUG00000006286CSDE17098.953ENSOCUG00000016438CSDE19398.953Oryctolagus_cuniculus
ENSEEUG00000006286CSDE16881.250ENSORLG00000000707csde19381.250Oryzias_latipes
ENSEEUG00000006286CSDE17373.298ENSORLG00020005148csde19373.298Oryzias_latipes_hni
ENSEEUG00000006286CSDE16881.250ENSORLG00015019415csde19381.250Oryzias_latipes_hsok
ENSEEUG00000006286CSDE16881.620ENSOMEG00000015656csde19381.620Oryzias_melastigma
ENSEEUG00000006286CSDE17499.476ENSOGAG00000012127CSDE19399.476Otolemur_garnettii
ENSEEUG00000006286CSDE17498.429ENSOARG00000020034CSDE19398.429Ovis_aries
ENSEEUG00000006286CSDE17499.476ENSPPAG00000025861CSDE19399.476Pan_paniscus
ENSEEUG00000006286CSDE17499.476ENSPPRG00000006747CSDE19399.476Panthera_pardus
ENSEEUG00000006286CSDE17499.476ENSPTIG00000015468CSDE19399.476Panthera_tigris_altaica
ENSEEUG00000006286CSDE17499.476ENSPTRG00000033721CSDE19399.476Pan_troglodytes
ENSEEUG00000006286CSDE17499.476ENSPANG00000018873CSDE19399.476Papio_anubis
ENSEEUG00000006286CSDE16880.062ENSPKIG00000009459csde19380.062Paramormyrops_kingsleyae
ENSEEUG00000006286CSDE16687.429ENSPSIG00000003823CSDE19587.429Pelodiscus_sinensis
ENSEEUG00000006286CSDE16881.875ENSPMGG00000000772csde19381.875Periophthalmus_magnuspinnatus
ENSEEUG00000006286CSDE16897.906ENSPEMG00000020357-9297.906Peromyscus_maniculatus_bairdii
ENSEEUG00000006286CSDE17498.953ENSPCIG00000022587CSDE19398.953Phascolarctos_cinereus
ENSEEUG00000006286CSDE16783.246ENSPFOG00000012664csde19183.246Poecilia_formosa
ENSEEUG00000006286CSDE16771.728ENSPLAG00000017680csde18771.728Poecilia_latipinna
ENSEEUG00000006286CSDE16771.728ENSPMEG00000005094csde18971.728Poecilia_mexicana
ENSEEUG00000006286CSDE17272.165ENSPREG00000011631csde19371.816Poecilia_reticulata
ENSEEUG00000006286CSDE16899.476ENSPPYG00000000996CSDE19299.476Pongo_abelii
ENSEEUG00000006286CSDE17499.476ENSPCAG00000014368CSDE19399.476Procavia_capensis
ENSEEUG00000006286CSDE16899.476ENSPCOG00000017893CSDE19999.476Propithecus_coquereli
ENSEEUG00000006286CSDE17499.476ENSPVAG00000008225CSDE19399.476Pteropus_vampyrus
ENSEEUG00000006286CSDE16881.562ENSPNYG00000013745csde19381.562Pundamilia_nyererei
ENSEEUG00000006286CSDE16882.188ENSPNAG00000001958csde19282.188Pygocentrus_nattereri
ENSEEUG00000006286CSDE16897.906ENSRNOG00000061058Csde19297.906Rattus_norvegicus
ENSEEUG00000006286CSDE17496.712ENSRBIG00000038966-9296.712Rhinopithecus_bieti
ENSEEUG00000006286CSDE17098.429ENSRBIG00000038088-9298.429Rhinopithecus_bieti
ENSEEUG00000006286CSDE17499.476ENSRROG00000043101CSDE19399.476Rhinopithecus_roxellana
ENSEEUG00000006286CSDE17498.953ENSSBOG00000035592CSDE19398.953Saimiri_boliviensis_boliviensis
ENSEEUG00000006286CSDE17498.429ENSSHAG00000009831CSDE19398.429Sarcophilus_harrisii
ENSEEUG00000006286CSDE16880.312ENSSFOG00015007498csde19380.312Scleropages_formosus
ENSEEUG00000006286CSDE17475.916ENSSMAG00000007203csde19381.308Scophthalmus_maximus
ENSEEUG00000006286CSDE16881.308ENSSDUG00000015380csde19381.308Seriola_dumerili
ENSEEUG00000006286CSDE16881.308ENSSLDG00000008819csde19381.308Seriola_lalandi_dorsalis
ENSEEUG00000006286CSDE17498.953ENSSARG00000000738CSDE19398.953Sorex_araneus
ENSEEUG00000006286CSDE17491.099ENSSPUG00000008714CSDE19296.552Sphenodon_punctatus
ENSEEUG00000006286CSDE16882.555ENSSPAG00000000716csde19282.555Stegastes_partitus
ENSEEUG00000006286CSDE17498.953ENSSSCG00000006752CSDE19698.119Sus_scrofa
ENSEEUG00000006286CSDE16889.529ENSTGUG00000000972CSDE19289.529Taeniopygia_guttata
ENSEEUG00000006286CSDE16880.062ENSTRUG00000007996csde19280.062Takifugu_rubripes
ENSEEUG00000006286CSDE17497.906ENSTTRG00000015583CSDE19397.906Tursiops_truncatus
ENSEEUG00000006286CSDE16393.822ENSUAMG00000024289-9993.822Ursus_americanus
ENSEEUG00000006286CSDE16596.818ENSUAMG00000021779-9896.818Ursus_americanus
ENSEEUG00000006286CSDE17293.194ENSUMAG00000009720-9393.194Ursus_maritimus
ENSEEUG00000006286CSDE17498.039ENSVPAG00000000749CSDE17598.039Vicugna_pacos
ENSEEUG00000006286CSDE16699.270ENSVVUG00000009890CSDE19499.270Vulpes_vulpes
ENSEEUG00000006286CSDE16783.761ENSXETG00000021448csde19283.761Xenopus_tropicalis
ENSEEUG00000006286CSDE16885.455ENSXCOG00000000035csde18785.455Xiphophorus_couchianus
ENSEEUG00000006286CSDE16882.866ENSXMAG00000009080csde19282.866Xiphophorus_maculatus

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