EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000006569 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 24882 bases
Position: chrGeneScaffold_5175:278922-303803
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000005987	zf-C2H2	PF00096.26	6.6e-21	1	2
ENSEEUP00000005987	zf-C2H2	PF00096.26	6.6e-21	2	2
ENSEEUP00000005987	zf-met	PF12874.7	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000006557	PRDM4-201	2253	-	ENSEEUP00000005987	750 (aa)	-	UPI0000F642C3

Gene Model

Click here to download ENSEEUG00000006569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000006569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000006569	PRDM4	99	92.943	ENSG00000110851	PRDM4	100	89.247	Homo_sapiens
ENSEEUG00000006569	PRDM4	99	93.617	ENSAMEG00000016174	PRDM4	94	93.617	Ailuropoda_melanoleuca
ENSEEUG00000006569	PRDM4	99	83.979	ENSAPLG00000009846	PRDM4	94	83.979	Anas_platyrhynchos
ENSEEUG00000006569	PRDM4	99	92.810	ENSANAG00000024800	PRDM4	94	92.277	Aotus_nancymaae
ENSEEUG00000006569	PRDM4	99	92.943	ENSBTAG00000012999	PRDM4	94	93.209	Bos_taurus
ENSEEUG00000006569	PRDM4	99	92.144	ENSCJAG00000015261	PRDM4	94	92.543	Callithrix_jacchus
ENSEEUG00000006569	PRDM4	99	93.209	ENSCAFG00000001788	PRDM4	94	93.475	Canis_familiaris
ENSEEUG00000006569	PRDM4	99	93.209	ENSCAFG00020004916	PRDM4	94	93.475	Canis_lupus_dingo
ENSEEUG00000006569	PRDM4	99	92.810	ENSCHIG00000019409	PRDM4	94	93.076	Capra_hircus
ENSEEUG00000006569	PRDM4	99	93.209	ENSTSYG00000009248	PRDM4	94	93.475	Carlito_syrichta
ENSEEUG00000006569	PRDM4	99	86.454	ENSCAPG00000013937	PRDM4	94	86.853	Cavia_aperea
ENSEEUG00000006569	PRDM4	99	86.298	ENSCPOG00000022385	PRDM4	94	86.298	Cavia_porcellus
ENSEEUG00000006569	PRDM4	99	92.810	ENSCCAG00000036033	PRDM4	94	93.209	Cebus_capucinus
ENSEEUG00000006569	PRDM4	99	92.543	ENSCATG00000044797	PRDM4	94	92.943	Cercocebus_atys
ENSEEUG00000006569	PRDM4	99	88.522	ENSCLAG00000007545	PRDM4	94	88.654	Chinchilla_lanigera
ENSEEUG00000006569	PRDM4	99	92.810	ENSCSAG00000002896	PRDM4	94	93.209	Chlorocebus_sabaeus
ENSEEUG00000006569	PRDM4	74	98.361	ENSCHOG00000001744	PRDM4	79	98.361	Choloepus_hoffmanni
ENSEEUG00000006569	PRDM4	99	86.916	ENSCPBG00000023187	PRDM4	94	86.782	Chrysemys_picta_bellii
ENSEEUG00000006569	PRDM4	99	92.676	ENSCANG00000021804	PRDM4	94	93.076	Colobus_angolensis_palliatus
ENSEEUG00000006569	PRDM4	99	90.079	ENSCGRG00001015102	-	94	90.079	Cricetulus_griseus_chok1gshd
ENSEEUG00000006569	PRDM4	99	90.079	ENSCGRG00000004044	-	98	90.079	Cricetulus_griseus_crigri
ENSEEUG00000006569	PRDM4	99	92.277	ENSDNOG00000032478	PRDM4	94	92.676	Dasypus_novemcinctus
ENSEEUG00000006569	PRDM4	92	91.205	ENSDORG00000015081	-	93	92.182	Dipodomys_ordii
ENSEEUG00000006569	PRDM4	94	44.313	ENSEBUG00000003775	prdm4	93	44.690	Eptatretus_burgeri
ENSEEUG00000006569	PRDM4	99	93.475	ENSECAG00000015423	PRDM4	99	93.544	Equus_caballus
ENSEEUG00000006569	PRDM4	99	58.430	ENSELUG00000015265	prdm4	95	58.430	Esox_lucius
ENSEEUG00000006569	PRDM4	99	93.609	ENSFCAG00000022478	PRDM4	94	93.875	Felis_catus
ENSEEUG00000006569	PRDM4	99	84.667	ENSFALG00000013342	PRDM4	94	84.667	Ficedula_albicollis
ENSEEUG00000006569	PRDM4	99	84.021	ENSGALG00000012619	PRDM4	94	84.021	Gallus_gallus
ENSEEUG00000006569	PRDM4	99	86.515	ENSGAGG00000002763	PRDM4	89	86.382	Gopherus_agassizii
ENSEEUG00000006569	PRDM4	99	92.943	ENSGGOG00000001244	PRDM4	94	93.342	Gorilla_gorilla
ENSEEUG00000006569	PRDM4	99	90.533	ENSHGLG00000004590	PRDM4	92	90.533	Heterocephalus_glaber_female
ENSEEUG00000006569	PRDM4	99	89.578	ENSHGLG00100007464	PRDM4	94	89.578	Heterocephalus_glaber_male
ENSEEUG00000006569	PRDM4	99	57.383	ENSIPUG00000024162	prdm4	89	59.310	Ictalurus_punctatus
ENSEEUG00000006569	PRDM4	99	92.543	ENSSTOG00000016168	PRDM4	94	92.943	Ictidomys_tridecemlineatus
ENSEEUG00000006569	PRDM4	80	91.358	ENSJJAG00000022448	-	88	91.358	Jaculus_jaculus
ENSEEUG00000006569	PRDM4	99	71.842	ENSLACG00000007452	PRDM4	95	72.105	Latimeria_chalumnae
ENSEEUG00000006569	PRDM4	69	44.195	ENSLOCG00000017092	prdm4	81	53.680	Lepisosteus_oculatus
ENSEEUG00000006569	PRDM4	98	92.732	ENSLAFG00000001483	PRDM4	94	93.001	Loxodonta_africana
ENSEEUG00000006569	PRDM4	99	92.943	ENSMFAG00000041862	PRDM4	94	93.342	Macaca_fascicularis
ENSEEUG00000006569	PRDM4	99	92.943	ENSMMUG00000015550	PRDM4	94	93.342	Macaca_mulatta
ENSEEUG00000006569	PRDM4	99	92.676	ENSMNEG00000032319	PRDM4	94	93.076	Macaca_nemestrina
ENSEEUG00000006569	PRDM4	99	92.810	ENSMLEG00000039607	PRDM4	94	93.209	Mandrillus_leucophaeus
ENSEEUG00000006569	PRDM4	99	75.665	ENSMGAG00000012815	PRDM4	94	75.665	Meleagris_gallopavo
ENSEEUG00000006569	PRDM4	99	91.744	ENSMICG00000007807	PRDM4	99	92.011	Microcebus_murinus
ENSEEUG00000006569	PRDM4	99	90.533	ENSMOCG00000000753	Prdm4	94	90.800	Microtus_ochrogaster
ENSEEUG00000006569	PRDM4	99	91.467	ENSMUSG00000035529	Prdm4	94	91.600	Mus_musculus
ENSEEUG00000006569	PRDM4	99	89.880	MGP_PahariEiJ_G0031398	Prdm4	95	90.413	Mus_pahari
ENSEEUG00000006569	PRDM4	99	91.212	MGP_SPRETEiJ_G0016505	Prdm4	95	91.744	Mus_spretus
ENSEEUG00000006569	PRDM4	99	87.217	ENSMPUG00000012238	PRDM4	88	91.785	Mustela_putorius_furo
ENSEEUG00000006569	PRDM4	99	92.810	ENSMLUG00000000767	PRDM4	94	93.076	Myotis_lucifugus
ENSEEUG00000006569	PRDM4	99	91.600	ENSNGAG00000018627	Prdm4	94	91.867	Nannospalax_galili
ENSEEUG00000006569	PRDM4	99	93.076	ENSNLEG00000006748	PRDM4	94	93.475	Nomascus_leucogenys
ENSEEUG00000006569	PRDM4	89	84.471	ENSMEUG00000004495	PRDM4	84	84.706	Notamacropus_eugenii
ENSEEUG00000006569	PRDM4	86	93.252	ENSOPRG00000010192	PRDM4	81	93.769	Ochotona_princeps
ENSEEUG00000006569	PRDM4	99	87.067	ENSODEG00000014750	PRDM4	94	86.667	Octodon_degus
ENSEEUG00000006569	PRDM4	99	86.951	ENSOANG00000005526	PRDM4	94	87.350	Ornithorhynchus_anatinus
ENSEEUG00000006569	PRDM4	87	93.425	ENSOCUG00000012859	PRDM4	90	93.425	Oryctolagus_cuniculus
ENSEEUG00000006569	PRDM4	99	93.209	ENSOGAG00000011945	PRDM4	94	92.943	Otolemur_garnettii
ENSEEUG00000006569	PRDM4	99	92.543	ENSOARG00000017955	PRDM4	94	92.810	Ovis_aries
ENSEEUG00000006569	PRDM4	99	92.943	ENSPPAG00000038438	PRDM4	94	93.342	Pan_paniscus
ENSEEUG00000006569	PRDM4	99	93.609	ENSPPRG00000004144	PRDM4	94	93.875	Panthera_pardus
ENSEEUG00000006569	PRDM4	99	93.609	ENSPTIG00000005847	PRDM4	94	93.875	Panthera_tigris_altaica
ENSEEUG00000006569	PRDM4	99	92.943	ENSPTRG00000005400	PRDM4	94	93.342	Pan_troglodytes
ENSEEUG00000006569	PRDM4	99	92.943	ENSPANG00000022084	PRDM4	94	93.342	Papio_anubis
ENSEEUG00000006569	PRDM4	99	57.915	ENSPKIG00000000875	prdm4	95	57.789	Paramormyrops_kingsleyae
ENSEEUG00000006569	PRDM4	91	77.905	ENSPSIG00000012066	PRDM4	93	78.476	Pelodiscus_sinensis
ENSEEUG00000006569	PRDM4	99	91.877	ENSPEMG00000014598	Prdm4	94	91.611	Peromyscus_maniculatus_bairdii
ENSEEUG00000006569	PRDM4	99	85.503	ENSPCIG00000009471	PRDM4	98	85.042	Phascolarctos_cinereus
ENSEEUG00000006569	PRDM4	99	92.943	ENSPPYG00000004913	PRDM4	94	93.342	Pongo_abelii
ENSEEUG00000006569	PRDM4	82	92.058	ENSPCAG00000009987	PRDM4	77	92.545	Procavia_capensis
ENSEEUG00000006569	PRDM4	99	91.877	ENSPCOG00000021060	PRDM4	94	92.144	Propithecus_coquereli
ENSEEUG00000006569	PRDM4	99	92.952	ENSPVAG00000001596	PRDM4	94	93.351	Pteropus_vampyrus
ENSEEUG00000006569	PRDM4	99	91.223	ENSRNOG00000004962	Prdm4	94	91.223	Rattus_norvegicus
ENSEEUG00000006569	PRDM4	99	92.676	ENSRBIG00000035488	PRDM4	94	93.076	Rhinopithecus_bieti
ENSEEUG00000006569	PRDM4	99	92.810	ENSRROG00000012779	PRDM4	94	93.209	Rhinopithecus_roxellana
ENSEEUG00000006569	PRDM4	99	92.676	ENSSBOG00000000403	PRDM4	94	93.076	Saimiri_boliviensis_boliviensis
ENSEEUG00000006569	PRDM4	99	61.780	ENSSFOG00015023358	prdm4	94	61.911	Scleropages_formosus
ENSEEUG00000006569	PRDM4	99	93.342	ENSSSCG00000000160	PRDM4	94	93.875	Sus_scrofa
ENSEEUG00000006569	PRDM4	99	84.400	ENSTGUG00000010962	-	94	84.400	Taeniopygia_guttata
ENSEEUG00000006569	PRDM4	78	86.860	ENSTBEG00000001732	PRDM4	84	86.860	Tupaia_belangeri
ENSEEUG00000006569	PRDM4	99	92.543	ENSTTRG00000011056	PRDM4	94	92.810	Tursiops_truncatus
ENSEEUG00000006569	PRDM4	99	93.475	ENSUAMG00000022796	PRDM4	94	93.742	Ursus_americanus
ENSEEUG00000006569	PRDM4	99	93.475	ENSUMAG00000017231	PRDM4	94	93.742	Ursus_maritimus
ENSEEUG00000006569	PRDM4	99	93.342	ENSVPAG00000002215	PRDM4	94	93.742	Vicugna_pacos
ENSEEUG00000006569	PRDM4	99	93.209	ENSVVUG00000023397	PRDM4	94	93.475	Vulpes_vulpes