EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000006745 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 13420 bases
Position: chrGeneScaffold_2221:15553-28972
Accession: 103122738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000006140	MMR_HSR1	PF01926.23	7.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000006723	RAB5B-201	648	-	ENSEEUP00000006140	215 (aa)	XP_007533413	A0A1S3ADQ4

Gene Model

Click here to download ENSEEUG00000006745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000006745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000006745	RAB5B	100	81.395	ENSEEUG00000009044	RAB5A	100	81.395
ENSEEUG00000006745	RAB5B	70	34.211	ENSEEUG00000014548	HRAS	90	34.177
ENSEEUG00000006745	RAB5B	62	30.986	ENSEEUG00000000612	ARL8B	80	30.986
ENSEEUG00000006745	RAB5B	76	46.626	ENSEEUG00000013465	RAB1B	81	46.626
ENSEEUG00000006745	RAB5B	97	85.167	ENSEEUG00000002790	RAB5C	97	85.167
ENSEEUG00000006745	RAB5B	89	34.375	ENSEEUG00000001233	-	95	34.375
ENSEEUG00000006745	RAB5B	61	49.242	ENSEEUG00000009165	-	92	49.242
ENSEEUG00000006745	RAB5B	63	41.481	ENSEEUG00000013074	RAB14	63	41.481
ENSEEUG00000006745	RAB5B	78	36.571	ENSEEUG00000005264	RAB9B	85	36.571
ENSEEUG00000006745	RAB5B	90	42.268	ENSEEUG00000011721	RAB1A	96	42.268
ENSEEUG00000006745	RAB5B	55	34.454	ENSEEUG00000004731	RAB34	78	34.454
ENSEEUG00000006745	RAB5B	74	38.125	ENSEEUG00000015045	RAB23	67	38.125
ENSEEUG00000006745	RAB5B	75	45.342	ENSEEUG00000014804	RAB25	69	45.342
ENSEEUG00000006745	RAB5B	75	33.129	ENSEEUG00000003058	KRAS	85	33.129

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000006745	RAB5B	100	99.070	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSEEUG00000006745	RAB5B	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSEEUG00000006745	RAB5B	100	95.814	ENSACAG00000005380	RAB5B	100	95.814	Anolis_carolinensis
ENSEEUG00000006745	RAB5B	100	99.070	ENSANAG00000033215	RAB5B	95	99.070	Aotus_nancymaae
ENSEEUG00000006745	RAB5B	100	98.605	ENSBTAG00000014129	RAB5B	100	98.605	Bos_taurus
ENSEEUG00000006745	RAB5B	100	99.070	ENSCJAG00000041780	RAB5B	95	99.070	Callithrix_jacchus
ENSEEUG00000006745	RAB5B	100	99.070	ENSCAFG00000000087	RAB5B	100	99.070	Canis_familiaris
ENSEEUG00000006745	RAB5B	100	99.070	ENSCAFG00020026094	RAB5B	100	99.070	Canis_lupus_dingo
ENSEEUG00000006745	RAB5B	97	99.038	ENSCHIG00000010333	RAB5B	96	99.038	Capra_hircus
ENSEEUG00000006745	RAB5B	100	98.605	ENSTSYG00000009576	RAB5B	100	98.605	Carlito_syrichta
ENSEEUG00000006745	RAB5B	100	99.070	ENSCPOG00000034818	RAB5B	100	99.070	Cavia_porcellus
ENSEEUG00000006745	RAB5B	100	100.000	ENSCCAG00000019480	RAB5B	100	100.000	Cebus_capucinus
ENSEEUG00000006745	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSEEUG00000006745	RAB5B	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSEEUG00000006745	RAB5B	100	95.349	ENSCPBG00000012712	RAB5B	100	95.349	Chrysemys_picta_bellii
ENSEEUG00000006745	RAB5B	100	98.605	ENSCGRG00001000428	Rab5b	100	98.605	Cricetulus_griseus_chok1gshd
ENSEEUG00000006745	RAB5B	100	98.605	ENSCGRG00000009508	-	100	98.605	Cricetulus_griseus_crigri
ENSEEUG00000006745	RAB5B	100	99.070	ENSDORG00000025063	Rab5b	100	99.070	Dipodomys_ordii
ENSEEUG00000006745	RAB5B	100	98.605	ENSECAG00000023306	RAB5B	100	98.605	Equus_caballus
ENSEEUG00000006745	RAB5B	100	99.070	ENSFDAG00000008326	RAB5B	100	99.070	Fukomys_damarensis
ENSEEUG00000006745	RAB5B	100	98.140	ENSHGLG00000005995	RAB5B	100	98.140	Heterocephalus_glaber_female
ENSEEUG00000006745	RAB5B	100	98.140	ENSHGLG00100012955	RAB5B	100	98.140	Heterocephalus_glaber_male
ENSEEUG00000006745	RAB5B	100	97.674	ENSSTOG00000010536	RAB5B	100	97.674	Ictidomys_tridecemlineatus
ENSEEUG00000006745	RAB5B	100	98.605	ENSJJAG00000019506	Rab5b	100	98.605	Jaculus_jaculus
ENSEEUG00000006745	RAB5B	100	98.157	ENSLAFG00000018009	RAB5B	95	98.157	Loxodonta_africana
ENSEEUG00000006745	RAB5B	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSEEUG00000006745	RAB5B	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSEEUG00000006745	RAB5B	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSEEUG00000006745	RAB5B	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSEEUG00000006745	RAB5B	100	99.070	ENSMAUG00000011613	Rab5b	100	99.070	Mesocricetus_auratus
ENSEEUG00000006745	RAB5B	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSEEUG00000006745	RAB5B	100	99.070	ENSMUSG00000000711	Rab5b	100	99.070	Mus_musculus
ENSEEUG00000006745	RAB5B	100	99.070	MGP_PahariEiJ_G0031135	Rab5b	100	99.070	Mus_pahari
ENSEEUG00000006745	RAB5B	100	98.605	MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	Mus_spretus
ENSEEUG00000006745	RAB5B	99	97.685	ENSMPUG00000000946	RAB5B	89	97.685	Mustela_putorius_furo
ENSEEUG00000006745	RAB5B	100	99.070	ENSNLEG00000017570	-	100	99.070	Nomascus_leucogenys
ENSEEUG00000006745	RAB5B	100	99.070	ENSOPRG00000007883	RAB5B	100	99.070	Ochotona_princeps
ENSEEUG00000006745	RAB5B	100	98.605	ENSODEG00000003860	RAB5B	100	98.605	Octodon_degus
ENSEEUG00000006745	RAB5B	100	99.070	ENSOCUG00000013895	RAB5B	95	99.070	Oryctolagus_cuniculus
ENSEEUG00000006745	RAB5B	100	99.070	ENSOARG00000010651	RAB5B	95	99.070	Ovis_aries
ENSEEUG00000006745	RAB5B	100	99.070	ENSPPAG00000035431	RAB5B	100	99.070	Pan_paniscus
ENSEEUG00000006745	RAB5B	100	99.070	ENSPTRG00000005071	RAB5B	97	98.565	Pan_troglodytes
ENSEEUG00000006745	RAB5B	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSEEUG00000006745	RAB5B	100	99.070	ENSPCOG00000016461	RAB5B	100	99.070	Propithecus_coquereli
ENSEEUG00000006745	RAB5B	100	98.140	ENSRNOG00000006130	Rab5b	100	98.140	Rattus_norvegicus
ENSEEUG00000006745	RAB5B	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSEEUG00000006745	RAB5B	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSEEUG00000006745	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSEEUG00000006745	RAB5B	100	97.674	ENSSHAG00000007727	RAB5B	100	97.674	Sarcophilus_harrisii
ENSEEUG00000006745	RAB5B	100	99.070	ENSSARG00000006237	RAB5B	100	99.070	Sorex_araneus
ENSEEUG00000006745	RAB5B	100	95.349	ENSSPUG00000014873	RAB5B	100	95.349	Sphenodon_punctatus
ENSEEUG00000006745	RAB5B	100	99.070	ENSTTRG00000015001	RAB5B	100	99.070	Tursiops_truncatus
ENSEEUG00000006745	RAB5B	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSEEUG00000006745	RAB5B	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSEEUG00000006745	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes