EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000007257 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 3867 bases
Position: chrGeneScaffold_1400:11751-15617
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000006612	RRM_1	PF00076.22	5.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000007245	SLIRP-201	306	-	ENSEEUP00000006612	101 (aa)	-	UPI0000F6246D

Gene Model

Click here to download ENSEEUG00000007257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000007257's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000007257	SLIRP	88	66.292	ENSG00000119705	SLIRP	95	72.222	Homo_sapiens
ENSEEUG00000007257	SLIRP	70	56.338	ENSAPOG00000001298	slirp	71	56.338	Acanthochromis_polyacanthus
ENSEEUG00000007257	SLIRP	81	64.634	ENSAMEG00000003975	SLIRP	90	64.634	Ailuropoda_melanoleuca
ENSEEUG00000007257	SLIRP	97	50.000	ENSACIG00000023083	slirp	96	50.000	Amphilophus_citrinellus
ENSEEUG00000007257	SLIRP	87	50.000	ENSAOCG00000006342	slirp	89	50.000	Amphiprion_ocellaris
ENSEEUG00000007257	SLIRP	87	50.000	ENSAPEG00000015917	slirp	89	50.000	Amphiprion_percula
ENSEEUG00000007257	SLIRP	87	50.000	ENSAPEG00000015719	-	90	50.000	Amphiprion_percula
ENSEEUG00000007257	SLIRP	78	49.367	ENSATEG00000013525	slirp	79	49.367	Anabas_testudineus
ENSEEUG00000007257	SLIRP	70	56.338	ENSAMXG00000018693	slirp	71	56.338	Astyanax_mexicanus
ENSEEUG00000007257	SLIRP	100	59.406	ENSCJAG00000016946	SLIRP	92	59.406	Callithrix_jacchus
ENSEEUG00000007257	SLIRP	99	61.682	ENSCAFG00020015876	-	96	61.682	Canis_lupus_dingo
ENSEEUG00000007257	SLIRP	100	56.436	ENSCCAG00000030130	SLIRP	92	56.436	Cebus_capucinus
ENSEEUG00000007257	SLIRP	90	59.341	ENSCATG00000036327	SLIRP	76	67.606	Cercocebus_atys
ENSEEUG00000007257	SLIRP	90	59.341	ENSCSAG00000011736	SLIRP	96	55.660	Chlorocebus_sabaeus
ENSEEUG00000007257	SLIRP	78	48.750	ENSCPBG00000026327	SLIRP	81	48.750	Chrysemys_picta_bellii
ENSEEUG00000007257	SLIRP	71	65.278	ENSCANG00000032892	SLIRP	92	57.778	Colobus_angolensis_palliatus
ENSEEUG00000007257	SLIRP	90	64.130	ENSCGRG00001024068	Slirp	83	64.130	Cricetulus_griseus_chok1gshd
ENSEEUG00000007257	SLIRP	90	64.130	ENSCGRG00000017440	Slirp	83	64.130	Cricetulus_griseus_crigri
ENSEEUG00000007257	SLIRP	80	51.852	ENSCSEG00000015766	slirp	82	51.852	Cynoglossus_semilaevis
ENSEEUG00000007257	SLIRP	68	56.522	ENSCVAG00000012504	slirp	68	56.522	Cyprinodon_variegatus
ENSEEUG00000007257	SLIRP	71	51.389	ENSDARG00000097753	slirp	80	47.561	Danio_rerio
ENSEEUG00000007257	SLIRP	93	60.638	ENSDNOG00000007721	SLIRP	89	60.204	Dasypus_novemcinctus
ENSEEUG00000007257	SLIRP	97	60.952	ENSDORG00000012379	Slirp	95	60.952	Dipodomys_ordii
ENSEEUG00000007257	SLIRP	90	57.143	ENSETEG00000010345	SLIRP	82	57.143	Echinops_telfairi
ENSEEUG00000007257	SLIRP	100	64.706	ENSEASG00005020193	SLIRP	92	64.706	Equus_asinus_asinus
ENSEEUG00000007257	SLIRP	95	41.667	ENSELUG00000016800	slirp	94	41.667	Esox_lucius
ENSEEUG00000007257	SLIRP	83	65.476	ENSFCAG00000036326	SLIRP	86	65.476	Felis_catus
ENSEEUG00000007257	SLIRP	69	54.286	ENSFALG00000012583	SLIRP	66	54.286	Ficedula_albicollis
ENSEEUG00000007257	SLIRP	96	63.265	ENSFDAG00000008347	SLIRP	87	63.265	Fukomys_damarensis
ENSEEUG00000007257	SLIRP	73	56.757	ENSFHEG00000004709	slirp	79	56.757	Fundulus_heteroclitus
ENSEEUG00000007257	SLIRP	82	46.988	ENSGMOG00000016948	slirp	80	46.988	Gadus_morhua
ENSEEUG00000007257	SLIRP	83	51.190	ENSGALG00000031238	SLIRP	85	51.190	Gallus_gallus
ENSEEUG00000007257	SLIRP	89	53.333	ENSGAFG00000010998	slirp	89	53.333	Gambusia_affinis
ENSEEUG00000007257	SLIRP	68	55.072	ENSGACG00000020137	slirp	80	55.072	Gasterosteus_aculeatus
ENSEEUG00000007257	SLIRP	97	49.515	ENSGAGG00000009953	SLIRP	71	49.515	Gopherus_agassizii
ENSEEUG00000007257	SLIRP	88	66.292	ENSGGOG00000011059	-	92	65.116	Gorilla_gorilla
ENSEEUG00000007257	SLIRP	90	58.696	ENSHGLG00000018491	SLIRP	83	58.696	Heterocephalus_glaber_female
ENSEEUG00000007257	SLIRP	90	58.696	ENSHGLG00100014153	SLIRP	83	58.696	Heterocephalus_glaber_male
ENSEEUG00000007257	SLIRP	97	43.878	ENSHCOG00000006795	slirp	99	43.878	Hippocampus_comes
ENSEEUG00000007257	SLIRP	84	44.706	ENSIPUG00000010214	SLIRP	85	44.706	Ictalurus_punctatus
ENSEEUG00000007257	SLIRP	91	61.290	ENSSTOG00000034316	SLIRP	96	57.944	Ictidomys_tridecemlineatus
ENSEEUG00000007257	SLIRP	71	51.389	ENSKMAG00000002038	slirp	69	51.389	Kryptolebias_marmoratus
ENSEEUG00000007257	SLIRP	88	48.315	ENSLBEG00000007564	slirp	88	48.315	Labrus_bergylta
ENSEEUG00000007257	SLIRP	89	46.667	ENSLACG00000013434	SLIRP	87	46.667	Latimeria_chalumnae
ENSEEUG00000007257	SLIRP	90	59.341	ENSMFAG00000042960	SLIRP	87	62.963	Macaca_fascicularis
ENSEEUG00000007257	SLIRP	90	58.696	ENSMMUG00000029256	SLIRP	92	61.628	Macaca_mulatta
ENSEEUG00000007257	SLIRP	90	59.341	ENSMNEG00000028921	SLIRP	87	62.963	Macaca_nemestrina
ENSEEUG00000007257	SLIRP	70	67.606	ENSMLEG00000043644	SLIRP	72	67.606	Mandrillus_leucophaeus
ENSEEUG00000007257	SLIRP	88	51.685	ENSMZEG00005004617	slirp	89	51.685	Maylandia_zebra
ENSEEUG00000007257	SLIRP	100	60.784	ENSMAUG00000003857	Slirp	90	60.784	Mesocricetus_auratus
ENSEEUG00000007257	SLIRP	100	57.426	ENSMICG00000012080	SLIRP	92	57.426	Microcebus_murinus
ENSEEUG00000007257	SLIRP	100	59.804	ENSMOCG00000016019	Slirp	91	59.804	Microtus_ochrogaster
ENSEEUG00000007257	SLIRP	98	44.444	ENSMMOG00000018268	slirp	98	44.444	Mola_mola
ENSEEUG00000007257	SLIRP	69	58.571	ENSMODG00000005207	-	99	58.571	Monodelphis_domestica
ENSEEUG00000007257	SLIRP	97	45.918	ENSMALG00000012581	slirp	99	45.918	Monopterus_albus
ENSEEUG00000007257	SLIRP	96	60.204	MGP_CAROLIEiJ_G0017995	Slirp	91	60.204	Mus_caroli
ENSEEUG00000007257	SLIRP	99	60.396	ENSMUSG00000021040	Slirp	90	60.396	Mus_musculus
ENSEEUG00000007257	SLIRP	99	60.396	MGP_SPRETEiJ_G0018840	Slirp	90	60.396	Mus_spretus
ENSEEUG00000007257	SLIRP	90	68.478	ENSMLUG00000029544	-	92	62.745	Myotis_lucifugus
ENSEEUG00000007257	SLIRP	90	66.304	ENSMLUG00000024998	-	92	62.745	Myotis_lucifugus
ENSEEUG00000007257	SLIRP	87	65.169	ENSNGAG00000016363	Slirp	86	65.169	Nannospalax_galili
ENSEEUG00000007257	SLIRP	100	59.406	ENSNLEG00000032459	-	92	59.406	Nomascus_leucogenys
ENSEEUG00000007257	SLIRP	100	61.386	ENSNLEG00000027238	-	92	67.500	Nomascus_leucogenys
ENSEEUG00000007257	SLIRP	100	58.824	ENSODEG00000012580	SLIRP	89	60.976	Octodon_degus
ENSEEUG00000007257	SLIRP	87	53.409	ENSONIG00000011692	slirp	88	53.409	Oreochromis_niloticus
ENSEEUG00000007257	SLIRP	74	66.667	ENSOANG00000022366	SLIRP	68	66.667	Ornithorhynchus_anatinus
ENSEEUG00000007257	SLIRP	88	48.315	ENSORLG00000010761	slirp	68	48.315	Oryzias_latipes
ENSEEUG00000007257	SLIRP	88	47.191	ENSORLG00020022188	slirp	88	47.191	Oryzias_latipes_hni
ENSEEUG00000007257	SLIRP	100	45.545	ENSORLG00015020171	slirp	99	45.545	Oryzias_latipes_hsok
ENSEEUG00000007257	SLIRP	98	46.465	ENSOMEG00000019321	slirp	98	46.465	Oryzias_melastigma
ENSEEUG00000007257	SLIRP	90	64.835	ENSPPAG00000040710	-	96	61.321	Pan_paniscus
ENSEEUG00000007257	SLIRP	83	65.476	ENSPPRG00000014350	SLIRP	86	65.476	Panthera_pardus
ENSEEUG00000007257	SLIRP	83	65.476	ENSPTIG00000014196	SLIRP	86	65.476	Panthera_tigris_altaica
ENSEEUG00000007257	SLIRP	88	66.292	ENSPTRG00000030691	SLIRP	96	62.500	Pan_troglodytes
ENSEEUG00000007257	SLIRP	90	59.341	ENSPANG00000026323	SLIRP	76	67.606	Papio_anubis
ENSEEUG00000007257	SLIRP	59	60.000	ENSPKIG00000008831	slirp	59	60.000	Paramormyrops_kingsleyae
ENSEEUG00000007257	SLIRP	77	50.000	ENSPMGG00000010541	slirp	90	50.000	Periophthalmus_magnuspinnatus
ENSEEUG00000007257	SLIRP	90	60.215	ENSPEMG00000013234	Slirp	90	57.282	Peromyscus_maniculatus_bairdii
ENSEEUG00000007257	SLIRP	62	53.968	ENSPMAG00000009355	slirp	70	53.968	Petromyzon_marinus
ENSEEUG00000007257	SLIRP	70	57.746	ENSPCIG00000026842	-	76	57.746	Phascolarctos_cinereus
ENSEEUG00000007257	SLIRP	98	48.485	ENSPFOG00000006758	slirp	98	48.485	Poecilia_formosa
ENSEEUG00000007257	SLIRP	98	49.495	ENSPLAG00000011140	slirp	98	49.495	Poecilia_latipinna
ENSEEUG00000007257	SLIRP	98	48.485	ENSPMEG00000019535	slirp	98	48.485	Poecilia_mexicana
ENSEEUG00000007257	SLIRP	98	48.485	ENSPREG00000011673	slirp	98	48.485	Poecilia_reticulata
ENSEEUG00000007257	SLIRP	90	62.637	ENSPPYG00000006030	SLIRP	96	59.434	Pongo_abelii
ENSEEUG00000007257	SLIRP	100	58.416	ENSPCOG00000015159	SLIRP	92	58.416	Propithecus_coquereli
ENSEEUG00000007257	SLIRP	88	50.562	ENSPNAG00000008633	slirp	90	50.562	Pygocentrus_nattereri
ENSEEUG00000007257	SLIRP	91	58.696	ENSRBIG00000032222	-	92	61.628	Rhinopithecus_bieti
ENSEEUG00000007257	SLIRP	89	54.444	ENSRBIG00000035817	-	96	51.923	Rhinopithecus_bieti
ENSEEUG00000007257	SLIRP	69	65.714	ENSRBIG00000032998	-	78	60.714	Rhinopithecus_bieti
ENSEEUG00000007257	SLIRP	73	62.162	ENSRBIG00000031396	-	88	57.955	Rhinopithecus_bieti
ENSEEUG00000007257	SLIRP	91	58.696	ENSRROG00000036656	-	92	61.628	Rhinopithecus_roxellana
ENSEEUG00000007257	SLIRP	73	60.811	ENSRROG00000035604	-	88	56.818	Rhinopithecus_roxellana
ENSEEUG00000007257	SLIRP	77	64.103	ENSRROG00000041312	-	91	59.783	Rhinopithecus_roxellana
ENSEEUG00000007257	SLIRP	69	68.571	ENSRROG00000017133	-	88	63.095	Rhinopithecus_roxellana
ENSEEUG00000007257	SLIRP	80	65.432	ENSSBOG00000020014	SLIRP	87	65.432	Saimiri_boliviensis_boliviensis
ENSEEUG00000007257	SLIRP	69	57.143	ENSSFOG00015011165	slirp	71	57.143	Scleropages_formosus
ENSEEUG00000007257	SLIRP	87	43.820	ENSSMAG00000012930	slirp	87	43.820	Scophthalmus_maximus
ENSEEUG00000007257	SLIRP	88	49.438	ENSSDUG00000021883	slirp	58	49.438	Seriola_dumerili
ENSEEUG00000007257	SLIRP	88	49.438	ENSSLDG00000023136	slirp	80	49.438	Seriola_lalandi_dorsalis
ENSEEUG00000007257	SLIRP	71	48.611	ENSSPUG00000009346	SLIRP	73	48.611	Sphenodon_punctatus
ENSEEUG00000007257	SLIRP	86	47.126	ENSSPAG00000013477	slirp	87	47.126	Stegastes_partitus
ENSEEUG00000007257	SLIRP	90	69.565	ENSSSCG00000028167	SLIRP	83	69.565	Sus_scrofa
ENSEEUG00000007257	SLIRP	69	54.286	ENSTGUG00000012337	SLIRP	76	50.617	Taeniopygia_guttata
ENSEEUG00000007257	SLIRP	84	44.186	ENSTRUG00000020127	slirp	84	44.186	Takifugu_rubripes
ENSEEUG00000007257	SLIRP	100	63.725	ENSUAMG00000022445	SLIRP	92	63.725	Ursus_americanus
ENSEEUG00000007257	SLIRP	100	62.745	ENSUMAG00000007166	SLIRP	92	62.745	Ursus_maritimus
ENSEEUG00000007257	SLIRP	100	61.386	ENSVPAG00000001781	SLIRP	92	61.386	Vicugna_pacos
ENSEEUG00000007257	SLIRP	90	66.304	ENSVVUG00000004436	SLIRP	83	66.304	Vulpes_vulpes
ENSEEUG00000007257	SLIRP	71	51.389	ENSXETG00000030343	SLIRP	81	51.389	Xenopus_tropicalis
ENSEEUG00000007257	SLIRP	98	49.495	ENSXCOG00000009422	slirp	98	49.495	Xiphophorus_couchianus
ENSEEUG00000007257	SLIRP	98	50.505	ENSXMAG00000015655	slirp	98	50.505	Xiphophorus_maculatus