EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000007331 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 6076 bases
Position: chrGeneScaffold_5113:1256-7331
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000006663	FDF	PF09532.10	3.1e-18	1	1
ENSEEUP00000006663	LSM14	PF12701.7	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000007303	LSM14B-201	855	-	ENSEEUP00000006663	285 (aa)	-	UPI0000F61153

Gene Model

Click here to download ENSEEUG00000007331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000007331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000007331	LSM14B	61	69.474	ENSEEUG00000015699	LSM14A	50	69.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000007331	LSM14B	100	74.737	ENSG00000149657	LSM14B	74	74.737	Homo_sapiens
ENSEEUG00000007331	LSM14B	79	68.000	ENSAPOG00000001780	lsm14b	55	68.000	Acanthochromis_polyacanthus
ENSEEUG00000007331	LSM14B	80	97.980	ENSAMEG00000013430	LSM14B	54	97.980	Ailuropoda_melanoleuca
ENSEEUG00000007331	LSM14B	71	69.000	ENSACIG00000012266	lsm14b	50	65.000	Amphilophus_citrinellus
ENSEEUG00000007331	LSM14B	67	59.596	ENSAOCG00000006667	LSM14B	54	58.586	Amphiprion_ocellaris
ENSEEUG00000007331	LSM14B	79	69.000	ENSAOCG00000012380	lsm14b	55	69.000	Amphiprion_ocellaris
ENSEEUG00000007331	LSM14B	76	67.000	ENSATEG00000016603	lsm14b	50	67.000	Anabas_testudineus
ENSEEUG00000007331	LSM14B	80	94.949	ENSAPLG00000013203	LSM14B	58	94.949	Anas_platyrhynchos
ENSEEUG00000007331	LSM14B	100	66.319	ENSACAG00000016195	LSM14B	74	66.319	Anolis_carolinensis
ENSEEUG00000007331	LSM14B	100	75.088	ENSANAG00000037915	LSM14B	74	75.088	Aotus_nancymaae
ENSEEUG00000007331	LSM14B	77	70.000	ENSAMXG00000002865	lsm14b	56	69.000	Astyanax_mexicanus
ENSEEUG00000007331	LSM14B	80	97.980	ENSBTAG00000021558	LSM14B	54	97.980	Bos_taurus
ENSEEUG00000007331	LSM14B	100	75.439	ENSCJAG00000014434	LSM14B	74	75.439	Callithrix_jacchus
ENSEEUG00000007331	LSM14B	80	97.980	ENSCAFG00000012518	LSM14B	58	97.980	Canis_familiaris
ENSEEUG00000007331	LSM14B	80	97.980	ENSCAFG00020022150	LSM14B	54	97.980	Canis_lupus_dingo
ENSEEUG00000007331	LSM14B	80	97.980	ENSCHIG00000010284	-	54	97.980	Capra_hircus
ENSEEUG00000007331	LSM14B	75	85.217	ENSCHIG00000022681	-	57	85.217	Capra_hircus
ENSEEUG00000007331	LSM14B	100	74.035	ENSTSYG00000031914	LSM14B	74	74.035	Carlito_syrichta
ENSEEUG00000007331	LSM14B	100	74.737	ENSCAPG00000013059	LSM14B	83	74.737	Cavia_aperea
ENSEEUG00000007331	LSM14B	100	75.088	ENSCPOG00000038080	LSM14B	83	75.088	Cavia_porcellus
ENSEEUG00000007331	LSM14B	100	75.088	ENSCCAG00000021267	LSM14B	74	75.088	Cebus_capucinus
ENSEEUG00000007331	LSM14B	100	74.386	ENSCATG00000036006	LSM14B	74	74.386	Cercocebus_atys
ENSEEUG00000007331	LSM14B	100	74.737	ENSCLAG00000003186	LSM14B	83	74.737	Chinchilla_lanigera
ENSEEUG00000007331	LSM14B	80	93.798	ENSCSAG00000015729	LSM14B	54	93.798	Chlorocebus_sabaeus
ENSEEUG00000007331	LSM14B	80	93.939	ENSCPBG00000027065	LSM14B	54	93.939	Chrysemys_picta_bellii
ENSEEUG00000007331	LSM14B	100	74.386	ENSCANG00000036986	LSM14B	83	74.386	Colobus_angolensis_palliatus
ENSEEUG00000007331	LSM14B	100	74.386	ENSCGRG00001018399	Lsm14b	74	74.386	Cricetulus_griseus_chok1gshd
ENSEEUG00000007331	LSM14B	79	69.231	ENSDARG00000025386	lsm14b	75	43.643	Danio_rerio
ENSEEUG00000007331	LSM14B	53	95.652	ENSDNOG00000025246	LSM14B	50	95.652	Dasypus_novemcinctus
ENSEEUG00000007331	LSM14B	100	73.333	ENSDORG00000016683	Lsm14b	72	73.333	Dipodomys_ordii
ENSEEUG00000007331	LSM14B	58	97.143	ENSETEG00000011188	-	71	97.143	Echinops_telfairi
ENSEEUG00000007331	LSM14B	80	81.633	ENSETEG00000001869	-	59	81.633	Echinops_telfairi
ENSEEUG00000007331	LSM14B	53	95.652	ENSEASG00005023218	LSM14B	50	95.652	Equus_asinus_asinus
ENSEEUG00000007331	LSM14B	80	97.980	ENSECAG00000010659	LSM14B	54	97.980	Equus_caballus
ENSEEUG00000007331	LSM14B	77	63.636	ENSELUG00000016299	LSM14B	50	63.636	Esox_lucius
ENSEEUG00000007331	LSM14B	74	70.213	ENSELUG00000005780	lsm14b	57	72.000	Esox_lucius
ENSEEUG00000007331	LSM14B	100	76.491	ENSFCAG00000003248	LSM14B	74	76.491	Felis_catus
ENSEEUG00000007331	LSM14B	80	95.960	ENSFALG00000010618	LSM14B	59	95.960	Ficedula_albicollis
ENSEEUG00000007331	LSM14B	100	74.737	ENSFDAG00000002214	LSM14B	83	74.737	Fukomys_damarensis
ENSEEUG00000007331	LSM14B	65	66.000	ENSGMOG00000017115	lsm14b	52	64.000	Gadus_morhua
ENSEEUG00000007331	LSM14B	78	95.960	ENSGALG00000005125	LSM14B	53	95.960	Gallus_gallus
ENSEEUG00000007331	LSM14B	79	64.000	ENSGAFG00000020318	lsm14b	55	64.000	Gambusia_affinis
ENSEEUG00000007331	LSM14B	79	66.000	ENSGACG00000009973	lsm14b	57	66.000	Gasterosteus_aculeatus
ENSEEUG00000007331	LSM14B	100	74.737	ENSGGOG00000005630	LSM14B	78	74.737	Gorilla_gorilla
ENSEEUG00000007331	LSM14B	100	74.737	ENSHGLG00000015055	LSM14B	74	74.737	Heterocephalus_glaber_female
ENSEEUG00000007331	LSM14B	100	72.281	ENSHGLG00100015273	LSM14B	83	72.281	Heterocephalus_glaber_male
ENSEEUG00000007331	LSM14B	78	71.000	ENSIPUG00000014946	lsm14b	55	68.000	Ictalurus_punctatus
ENSEEUG00000007331	LSM14B	100	75.789	ENSSTOG00000020482	LSM14B	83	75.789	Ictidomys_tridecemlineatus
ENSEEUG00000007331	LSM14B	100	72.982	ENSJJAG00000012728	Lsm14b	75	72.982	Jaculus_jaculus
ENSEEUG00000007331	LSM14B	80	85.859	ENSLACG00000003849	LSM14B	54	83.838	Latimeria_chalumnae
ENSEEUG00000007331	LSM14B	79	79.000	ENSLOCG00000003746	lsm14b	64	77.000	Lepisosteus_oculatus
ENSEEUG00000007331	LSM14B	100	72.632	ENSLAFG00000007492	LSM14B	82	72.632	Loxodonta_africana
ENSEEUG00000007331	LSM14B	100	75.088	ENSMFAG00000041479	LSM14B	74	75.088	Macaca_fascicularis
ENSEEUG00000007331	LSM14B	100	75.088	ENSMMUG00000014084	LSM14B	74	75.088	Macaca_mulatta
ENSEEUG00000007331	LSM14B	100	75.088	ENSMNEG00000045573	LSM14B	74	75.088	Macaca_nemestrina
ENSEEUG00000007331	LSM14B	100	74.386	ENSMLEG00000040895	LSM14B	83	74.386	Mandrillus_leucophaeus
ENSEEUG00000007331	LSM14B	78	65.000	ENSMAMG00000020539	lsm14b	55	65.000	Mastacembelus_armatus
ENSEEUG00000007331	LSM14B	78	60.606	ENSMAMG00000024124	LSM14B	56	59.596	Mastacembelus_armatus
ENSEEUG00000007331	LSM14B	74	56.250	ENSMZEG00005026001	LSM14B	55	61.000	Maylandia_zebra
ENSEEUG00000007331	LSM14B	100	68.166	ENSMGAG00000005300	LSM14B	81	69.204	Meleagris_gallopavo
ENSEEUG00000007331	LSM14B	100	74.386	ENSMAUG00000020700	Lsm14b	74	74.386	Mesocricetus_auratus
ENSEEUG00000007331	LSM14B	100	75.439	ENSMICG00000014675	LSM14B	74	75.439	Microcebus_murinus
ENSEEUG00000007331	LSM14B	100	73.333	ENSMOCG00000020600	Lsm14b	74	73.333	Microtus_ochrogaster
ENSEEUG00000007331	LSM14B	65	68.687	ENSMMOG00000020042	lsm14b	55	68.687	Mola_mola
ENSEEUG00000007331	LSM14B	78	62.626	ENSMMOG00000017321	LSM14B	58	62.626	Mola_mola
ENSEEUG00000007331	LSM14B	74	56.250	ENSMALG00000022251	LSM14B	53	56.566	Monopterus_albus
ENSEEUG00000007331	LSM14B	79	66.000	ENSMALG00000004783	lsm14b	54	66.000	Monopterus_albus
ENSEEUG00000007331	LSM14B	80	94.949	MGP_CAROLIEiJ_G0024770	Lsm14b	54	94.949	Mus_caroli
ENSEEUG00000007331	LSM14B	100	73.684	ENSMUSG00000039108	Lsm14b	74	73.684	Mus_musculus
ENSEEUG00000007331	LSM14B	80	94.949	MGP_PahariEiJ_G0026214	Lsm14b	54	94.949	Mus_pahari
ENSEEUG00000007331	LSM14B	80	94.949	MGP_SPRETEiJ_G0025693	Lsm14b	54	94.949	Mus_spretus
ENSEEUG00000007331	LSM14B	80	95.960	ENSMPUG00000007584	LSM14B	56	93.798	Mustela_putorius_furo
ENSEEUG00000007331	LSM14B	80	94.949	ENSMLUG00000000304	LSM14B	59	93.798	Myotis_lucifugus
ENSEEUG00000007331	LSM14B	100	75.088	ENSNLEG00000015757	LSM14B	83	75.088	Nomascus_leucogenys
ENSEEUG00000007331	LSM14B	68	94.949	ENSMEUG00000008267	-	50	94.949	Notamacropus_eugenii
ENSEEUG00000007331	LSM14B	100	75.439	ENSODEG00000004099	LSM14B	74	75.439	Octodon_degus
ENSEEUG00000007331	LSM14B	65	68.000	ENSONIG00000020318	lsm14b	57	68.000	Oreochromis_niloticus
ENSEEUG00000007331	LSM14B	62	92.405	ENSOANG00000003370	LSM14B	70	93.939	Ornithorhynchus_anatinus
ENSEEUG00000007331	LSM14B	100	71.579	ENSOCUG00000006279	LSM14B	83	71.579	Oryctolagus_cuniculus
ENSEEUG00000007331	LSM14B	65	65.000	ENSORLG00000013525	lsm14b	55	65.000	Oryzias_latipes
ENSEEUG00000007331	LSM14B	65	65.000	ENSORLG00020020553	lsm14b	55	65.000	Oryzias_latipes_hni
ENSEEUG00000007331	LSM14B	65	65.000	ENSORLG00015016862	lsm14b	55	65.000	Oryzias_latipes_hsok
ENSEEUG00000007331	LSM14B	65	64.000	ENSOMEG00000023917	lsm14b	55	64.000	Oryzias_melastigma
ENSEEUG00000007331	LSM14B	80	94.949	ENSOGAG00000003915	LSM14B	54	94.949	Otolemur_garnettii
ENSEEUG00000007331	LSM14B	80	97.980	ENSOARG00000014706	LSM14B	58	97.980	Ovis_aries
ENSEEUG00000007331	LSM14B	100	74.737	ENSPPAG00000035799	LSM14B	78	74.737	Pan_paniscus
ENSEEUG00000007331	LSM14B	100	76.491	ENSPPRG00000009197	LSM14B	74	76.491	Panthera_pardus
ENSEEUG00000007331	LSM14B	53	95.652	ENSPTIG00000021518	LSM14B	52	95.833	Panthera_tigris_altaica
ENSEEUG00000007331	LSM14B	100	74.737	ENSPTRG00000013696	LSM14B	74	74.737	Pan_troglodytes
ENSEEUG00000007331	LSM14B	100	74.737	ENSPANG00000011747	LSM14B	74	74.737	Papio_anubis
ENSEEUG00000007331	LSM14B	77	74.000	ENSPKIG00000003275	lsm14b	50	83.333	Paramormyrops_kingsleyae
ENSEEUG00000007331	LSM14B	80	95.960	ENSPSIG00000014762	LSM14B	66	95.960	Pelodiscus_sinensis
ENSEEUG00000007331	LSM14B	100	74.737	ENSPEMG00000017688	Lsm14b	75	74.737	Peromyscus_maniculatus_bairdii
ENSEEUG00000007331	LSM14B	80	94.949	ENSPCIG00000013405	LSM14B	59	94.949	Phascolarctos_cinereus
ENSEEUG00000007331	LSM14B	79	62.000	ENSPFOG00000005631	lsm14b	56	62.000	Poecilia_formosa
ENSEEUG00000007331	LSM14B	79	63.000	ENSPLAG00000002449	lsm14b	56	63.000	Poecilia_latipinna
ENSEEUG00000007331	LSM14B	79	62.000	ENSPMEG00000000745	lsm14b	56	62.000	Poecilia_mexicana
ENSEEUG00000007331	LSM14B	68	94.792	ENSPPYG00000011194	LSM14B	51	94.792	Pongo_abelii
ENSEEUG00000007331	LSM14B	100	75.439	ENSPCOG00000013625	LSM14B	74	75.439	Propithecus_coquereli
ENSEEUG00000007331	LSM14B	56	95.385	ENSPVAG00000017918	LSM14B	52	93.750	Pteropus_vampyrus
ENSEEUG00000007331	LSM14B	78	72.000	ENSPNAG00000012777	lsm14b	64	71.000	Pygocentrus_nattereri
ENSEEUG00000007331	LSM14B	80	93.939	ENSRNOG00000054557	Lsm14b	54	93.939	Rattus_norvegicus
ENSEEUG00000007331	LSM14B	100	74.737	ENSRBIG00000033461	LSM14B	82	74.737	Rhinopithecus_bieti
ENSEEUG00000007331	LSM14B	100	74.737	ENSRROG00000042949	LSM14B	74	74.737	Rhinopithecus_roxellana
ENSEEUG00000007331	LSM14B	100	75.439	ENSSBOG00000032820	LSM14B	83	75.439	Saimiri_boliviensis_boliviensis
ENSEEUG00000007331	LSM14B	100	71.579	ENSSHAG00000015528	LSM14B	80	71.579	Sarcophilus_harrisii
ENSEEUG00000007331	LSM14B	78	65.657	ENSSFOG00015004627	lsm14b	57	69.000	Scleropages_formosus
ENSEEUG00000007331	LSM14B	79	67.000	ENSSMAG00000012725	lsm14b	55	67.000	Scophthalmus_maximus
ENSEEUG00000007331	LSM14B	67	62.626	ENSSMAG00000000135	LSM14B	54	61.616	Scophthalmus_maximus
ENSEEUG00000007331	LSM14B	79	63.636	ENSSDUG00000022770	LSM14B	75	44.521	Seriola_dumerili
ENSEEUG00000007331	LSM14B	79	69.000	ENSSDUG00000020977	lsm14b	55	69.000	Seriola_dumerili
ENSEEUG00000007331	LSM14B	80	96.970	ENSSPUG00000014360	LSM14B	65	96.970	Sphenodon_punctatus
ENSEEUG00000007331	LSM14B	76	67.000	ENSSPAG00000020915	lsm14b	51	68.000	Stegastes_partitus
ENSEEUG00000007331	LSM14B	80	96.970	ENSSSCG00000026052	LSM14B	51	96.970	Sus_scrofa
ENSEEUG00000007331	LSM14B	100	70.833	ENSTGUG00000007884	LSM14B	83	70.833	Taeniopygia_guttata
ENSEEUG00000007331	LSM14B	76	59.406	ENSTRUG00000001529	LSM14B	55	57.426	Takifugu_rubripes
ENSEEUG00000007331	LSM14B	76	68.932	ENSTNIG00000002445	lsm14b	57	68.932	Tetraodon_nigroviridis
ENSEEUG00000007331	LSM14B	80	97.980	ENSUAMG00000025298	LSM14B	54	97.980	Ursus_americanus
ENSEEUG00000007331	LSM14B	80	97.980	ENSUMAG00000000480	LSM14B	54	97.980	Ursus_maritimus
ENSEEUG00000007331	LSM14B	100	75.789	ENSVVUG00000015920	LSM14B	81	75.789	Vulpes_vulpes
ENSEEUG00000007331	LSM14B	80	87.879	ENSXETG00000001997	lsm14b	87	65.157	Xenopus_tropicalis
ENSEEUG00000007331	LSM14B	78	62.245	ENSXMAG00000010013	lsm14b	55	62.245	Xiphophorus_maculatus