EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000007353 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 20845 bases
Position: chrGeneScaffold_8085:376-21220
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000006705	PseudoU_synth_2	PF00849.22	3.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000007349	RPUSD3-201	1062	-	ENSEEUP00000006705	354 (aa)	-	UPI0000F61E29

Gene Model

Click here to download ENSEEUG00000007353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000007353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000007353	RPUSD3	96	57.817	ENSG00000156990	RPUSD3	86	74.194	Homo_sapiens
ENSEEUG00000007353	RPUSD3	98	58.501	ENSAMEG00000016227	RPUSD3	97	58.501	Ailuropoda_melanoleuca
ENSEEUG00000007353	RPUSD3	60	50.235	ENSACAG00000009836	RPUSD3	61	50.235	Anolis_carolinensis
ENSEEUG00000007353	RPUSD3	74	45.255	ENSANAG00000007127	-	77	59.060	Aotus_nancymaae
ENSEEUG00000007353	RPUSD3	53	50.000	ENSANAG00000019945	-	74	50.000	Aotus_nancymaae
ENSEEUG00000007353	RPUSD3	53	49.733	ENSANAG00000038118	-	89	49.733	Aotus_nancymaae
ENSEEUG00000007353	RPUSD3	95	57.864	ENSBTAG00000007968	RPUSD3	96	57.864	Bos_taurus
ENSEEUG00000007353	RPUSD3	98	57.349	ENSCAFG00000029733	RPUSD3	97	57.349	Canis_familiaris
ENSEEUG00000007353	RPUSD3	98	57.349	ENSCAFG00020008582	RPUSD3	97	57.349	Canis_lupus_dingo
ENSEEUG00000007353	RPUSD3	96	57.267	ENSCHIG00000026027	RPUSD3	98	57.267	Capra_hircus
ENSEEUG00000007353	RPUSD3	95	57.602	ENSTSYG00000009994	RPUSD3	97	57.602	Carlito_syrichta
ENSEEUG00000007353	RPUSD3	60	73.113	ENSCAPG00000017559	RPUSD3	80	73.113	Cavia_aperea
ENSEEUG00000007353	RPUSD3	60	72.642	ENSCPOG00000037956	RPUSD3	60	72.642	Cavia_porcellus
ENSEEUG00000007353	RPUSD3	96	56.342	ENSCCAG00000029530	RPUSD3	96	56.342	Cebus_capucinus
ENSEEUG00000007353	RPUSD3	95	57.988	ENSCATG00000036939	RPUSD3	94	57.988	Cercocebus_atys
ENSEEUG00000007353	RPUSD3	100	56.583	ENSCSAG00000010506	RPUSD3	99	56.583	Chlorocebus_sabaeus
ENSEEUG00000007353	RPUSD3	60	51.643	ENSCPBG00000008825	RPUSD3	79	52.582	Chrysemys_picta_bellii
ENSEEUG00000007353	RPUSD3	96	58.065	ENSCANG00000040711	RPUSD3	95	58.065	Colobus_angolensis_palliatus
ENSEEUG00000007353	RPUSD3	98	54.571	ENSCGRG00001004923	Rpusd3	94	54.571	Cricetulus_griseus_chok1gshd
ENSEEUG00000007353	RPUSD3	98	54.571	ENSCGRG00000018315	Rpusd3	99	54.571	Cricetulus_griseus_crigri
ENSEEUG00000007353	RPUSD3	99	55.398	ENSDNOG00000039160	RPUSD3	92	55.398	Dasypus_novemcinctus
ENSEEUG00000007353	RPUSD3	60	70.507	ENSDORG00000026827	Rpusd3	76	70.507	Dipodomys_ordii
ENSEEUG00000007353	RPUSD3	95	56.305	ENSETEG00000006538	RPUSD3	95	56.433	Echinops_telfairi
ENSEEUG00000007353	RPUSD3	95	61.310	ENSEASG00005014160	RPUSD3	92	61.310	Equus_asinus_asinus
ENSEEUG00000007353	RPUSD3	98	60.345	ENSECAG00000019988	RPUSD3	95	60.345	Equus_caballus
ENSEEUG00000007353	RPUSD3	100	57.500	ENSFCAG00000014199	RPUSD3	99	57.500	Felis_catus
ENSEEUG00000007353	RPUSD3	60	47.664	ENSFALG00000012968	RPUSD3	77	47.664	Ficedula_albicollis
ENSEEUG00000007353	RPUSD3	60	72.642	ENSFDAG00000008350	RPUSD3	65	72.642	Fukomys_damarensis
ENSEEUG00000007353	RPUSD3	60	51.174	ENSGAGG00000007493	RPUSD3	66	52.113	Gopherus_agassizii
ENSEEUG00000007353	RPUSD3	96	58.112	ENSGGOG00000013120	RPUSD3	95	58.112	Gorilla_gorilla
ENSEEUG00000007353	RPUSD3	60	74.057	ENSHGLG00000011722	RPUSD3	54	74.057	Heterocephalus_glaber_female
ENSEEUG00000007353	RPUSD3	60	74.057	ENSHGLG00100016038	RPUSD3	54	74.057	Heterocephalus_glaber_male
ENSEEUG00000007353	RPUSD3	100	55.587	ENSSTOG00000002125	RPUSD3	99	55.587	Ictidomys_tridecemlineatus
ENSEEUG00000007353	RPUSD3	91	54.037	ENSJJAG00000012679	Rpusd3	92	54.037	Jaculus_jaculus
ENSEEUG00000007353	RPUSD3	96	59.249	ENSLAFG00000017501	RPUSD3	99	58.739	Loxodonta_africana
ENSEEUG00000007353	RPUSD3	95	58.235	ENSMFAG00000032407	RPUSD3	94	58.235	Macaca_fascicularis
ENSEEUG00000007353	RPUSD3	95	58.235	ENSMMUG00000010628	RPUSD3	99	57.669	Macaca_mulatta
ENSEEUG00000007353	RPUSD3	95	57.941	ENSMNEG00000040308	RPUSD3	94	57.941	Macaca_nemestrina
ENSEEUG00000007353	RPUSD3	95	57.941	ENSMLEG00000033940	RPUSD3	94	57.941	Mandrillus_leucophaeus
ENSEEUG00000007353	RPUSD3	97	54.885	ENSMAUG00000015473	Rpusd3	99	54.885	Mesocricetus_auratus
ENSEEUG00000007353	RPUSD3	95	58.284	ENSMICG00000002315	RPUSD3	97	58.580	Microcebus_murinus
ENSEEUG00000007353	RPUSD3	96	54.942	ENSMOCG00000022613	Rpusd3	98	54.942	Microtus_ochrogaster
ENSEEUG00000007353	RPUSD3	60	59.434	ENSMODG00000005210	RPUSD3	56	59.434	Monodelphis_domestica
ENSEEUG00000007353	RPUSD3	94	54.655	MGP_CAROLIEiJ_G0028725	Rpusd3	95	54.655	Mus_caroli
ENSEEUG00000007353	RPUSD3	94	54.955	ENSMUSG00000051169	Rpusd3	95	54.955	Mus_musculus
ENSEEUG00000007353	RPUSD3	94	56.156	MGP_PahariEiJ_G0022476	Rpusd3	95	56.156	Mus_pahari
ENSEEUG00000007353	RPUSD3	94	54.655	MGP_SPRETEiJ_G0029753	Rpusd3	95	54.655	Mus_spretus
ENSEEUG00000007353	RPUSD3	100	56.983	ENSMPUG00000017132	RPUSD3	97	57.803	Mustela_putorius_furo
ENSEEUG00000007353	RPUSD3	98	61.605	ENSMLUG00000006135	RPUSD3	98	61.605	Myotis_lucifugus
ENSEEUG00000007353	RPUSD3	98	54.755	ENSNGAG00000023704	Rpusd3	99	54.755	Nannospalax_galili
ENSEEUG00000007353	RPUSD3	96	46.313	ENSNLEG00000004214	RPUSD3	91	53.093	Nomascus_leucogenys
ENSEEUG00000007353	RPUSD3	60	58.685	ENSMEUG00000013098	-	82	58.685	Notamacropus_eugenii
ENSEEUG00000007353	RPUSD3	96	46.491	ENSOPRG00000002300	RPUSD3	96	46.491	Ochotona_princeps
ENSEEUG00000007353	RPUSD3	60	71.698	ENSODEG00000018137	RPUSD3	74	71.698	Octodon_degus
ENSEEUG00000007353	RPUSD3	60	42.453	ENSOANG00000012081	-	74	42.453	Ornithorhynchus_anatinus
ENSEEUG00000007353	RPUSD3	98	46.479	ENSOCUG00000027885	RPUSD3	99	46.479	Oryctolagus_cuniculus
ENSEEUG00000007353	RPUSD3	89	58.044	ENSOGAG00000012592	RPUSD3	99	58.044	Otolemur_garnettii
ENSEEUG00000007353	RPUSD3	96	57.681	ENSOARG00000005928	RPUSD3	96	57.681	Ovis_aries
ENSEEUG00000007353	RPUSD3	96	57.817	ENSPPAG00000038083	RPUSD3	95	57.817	Pan_paniscus
ENSEEUG00000007353	RPUSD3	100	58.939	ENSPPRG00000024433	RPUSD3	99	58.939	Panthera_pardus
ENSEEUG00000007353	RPUSD3	100	59.664	ENSPTIG00000006828	RPUSD3	99	59.885	Panthera_tigris_altaica
ENSEEUG00000007353	RPUSD3	96	57.522	ENSPTRG00000051760	RPUSD3	95	57.522	Pan_troglodytes
ENSEEUG00000007353	RPUSD3	95	58.235	ENSPANG00000023885	RPUSD3	94	58.235	Papio_anubis
ENSEEUG00000007353	RPUSD3	84	71.226	ENSPEMG00000017245	Rpusd3	99	55.714	Peromyscus_maniculatus_bairdii
ENSEEUG00000007353	RPUSD3	60	61.792	ENSPCIG00000021901	RPUSD3	62	61.792	Phascolarctos_cinereus
ENSEEUG00000007353	RPUSD3	100	56.056	ENSPPYG00000013676	RPUSD3	99	56.056	Pongo_abelii
ENSEEUG00000007353	RPUSD3	83	71.186	ENSPCAG00000013731	-	100	71.186	Procavia_capensis
ENSEEUG00000007353	RPUSD3	95	60.000	ENSPCOG00000018314	RPUSD3	95	60.000	Propithecus_coquereli
ENSEEUG00000007353	RPUSD3	97	58.140	ENSPVAG00000011107	RPUSD3	96	58.309	Pteropus_vampyrus
ENSEEUG00000007353	RPUSD3	60	72.170	ENSRNOG00000009084	Rpusd3	66	72.170	Rattus_norvegicus
ENSEEUG00000007353	RPUSD3	96	58.065	ENSRBIG00000041230	RPUSD3	95	58.065	Rhinopithecus_bieti
ENSEEUG00000007353	RPUSD3	82	75.472	ENSRROG00000043328	RPUSD3	95	58.065	Rhinopithecus_roxellana
ENSEEUG00000007353	RPUSD3	96	56.637	ENSSBOG00000036106	RPUSD3	96	56.637	Saimiri_boliviensis_boliviensis
ENSEEUG00000007353	RPUSD3	57	58.209	ENSSHAG00000015536	RPUSD3	68	59.434	Sarcophilus_harrisii
ENSEEUG00000007353	RPUSD3	100	57.746	ENSSSCG00000011555	RPUSD3	99	57.746	Sus_scrofa
ENSEEUG00000007353	RPUSD3	52	50.543	ENSTGUG00000008744	RPUSD3	75	49.711	Taeniopygia_guttata
ENSEEUG00000007353	RPUSD3	82	56.849	ENSTBEG00000000176	RPUSD3	100	56.610	Tupaia_belangeri
ENSEEUG00000007353	RPUSD3	100	56.497	ENSTTRG00000007544	RPUSD3	99	56.497	Tursiops_truncatus
ENSEEUG00000007353	RPUSD3	85	62.376	ENSUAMG00000011354	RPUSD3	94	62.376	Ursus_americanus
ENSEEUG00000007353	RPUSD3	95	60.767	ENSUMAG00000018830	RPUSD3	94	60.651	Ursus_maritimus
ENSEEUG00000007353	RPUSD3	98	57.637	ENSVVUG00000023735	RPUSD3	98	58.430	Vulpes_vulpes
ENSEEUG00000007353	RPUSD3	60	46.262	ENSXETG00000023546	rpusd3	76	46.262	Xenopus_tropicalis