EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000007440 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 720 bases
Position: chrscaffold_236563:337-1056
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000006755	LSM	PF01423.22	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000007406	-	720	-	ENSEEUP00000006755	239 (aa)	-	UPI0000F60E42

Gene Model

Click here to download ENSEEUG00000007440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000007440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000007440	-	92	91.818	ENSEEUG00000015568	SNRPB	77	91.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000007440	-	100	98.745	ENSG00000128739	SNRPN	99	99.405	Homo_sapiens
ENSEEUG00000007440	-	100	99.163	ENSAMEG00000007034	SNRPN	98	99.163	Ailuropoda_melanoleuca
ENSEEUG00000007440	-	100	98.745	ENSANAG00000034241	SNRPN	99	98.745	Aotus_nancymaae
ENSEEUG00000007440	-	100	98.745	ENSBTAG00000008251	SNRPN	99	99.095	Bos_taurus
ENSEEUG00000007440	-	95	98.238	ENSCJAG00000042622	-	95	98.238	Callithrix_jacchus
ENSEEUG00000007440	-	100	98.745	ENSCJAG00000003759	-	99	98.745	Callithrix_jacchus
ENSEEUG00000007440	-	100	99.163	ENSCAFG00000010127	SNRPN	99	99.163	Canis_familiaris
ENSEEUG00000007440	-	100	99.163	ENSCAFG00020024075	SNRPN	99	99.163	Canis_lupus_dingo
ENSEEUG00000007440	-	100	98.745	ENSCHIG00000017477	SNRPN	99	98.745	Capra_hircus
ENSEEUG00000007440	-	100	98.745	ENSTSYG00000005248	SNRPN	99	98.745	Carlito_syrichta
ENSEEUG00000007440	-	100	98.745	ENSCAPG00000003047	SNRPN	99	98.745	Cavia_aperea
ENSEEUG00000007440	-	100	98.745	ENSCPOG00000020270	SNRPN	99	98.745	Cavia_porcellus
ENSEEUG00000007440	-	100	98.745	ENSCCAG00000024231	SNRPN	99	98.745	Cebus_capucinus
ENSEEUG00000007440	-	100	98.745	ENSCATG00000032518	SNRPN	99	98.745	Cercocebus_atys
ENSEEUG00000007440	-	100	98.745	ENSCLAG00000011376	SNRPN	99	98.745	Chinchilla_lanigera
ENSEEUG00000007440	-	100	98.745	ENSCSAG00000006406	SNRPN	99	98.745	Chlorocebus_sabaeus
ENSEEUG00000007440	-	98	97.863	ENSCHOG00000001846	SNRPN	88	97.863	Choloepus_hoffmanni
ENSEEUG00000007440	-	100	98.745	ENSCANG00000041156	SNRPN	99	98.745	Colobus_angolensis_palliatus
ENSEEUG00000007440	-	100	98.326	ENSCGRG00001004136	Snrpn	99	98.326	Cricetulus_griseus_chok1gshd
ENSEEUG00000007440	-	100	98.326	ENSCGRG00000001621	Snrpn	99	98.326	Cricetulus_griseus_crigri
ENSEEUG00000007440	-	72	91.860	ENSCVAG00000014193	SNRPN	69	92.216	Cyprinodon_variegatus
ENSEEUG00000007440	-	100	97.908	ENSDNOG00000037060	SNRPN	98	97.908	Dasypus_novemcinctus
ENSEEUG00000007440	-	100	98.745	ENSDORG00000004527	Snrpn	99	98.745	Dipodomys_ordii
ENSEEUG00000007440	-	100	99.163	ENSEASG00005017871	SNRPN	99	99.163	Equus_asinus_asinus
ENSEEUG00000007440	-	100	99.163	ENSECAG00000018148	SNRPN	99	99.163	Equus_caballus
ENSEEUG00000007440	-	100	99.163	ENSFCAG00000022298	-	99	99.163	Felis_catus
ENSEEUG00000007440	-	77	85.792	ENSFDAG00000010528	-	86	83.333	Fukomys_damarensis
ENSEEUG00000007440	-	100	98.745	ENSFDAG00000016578	-	99	98.745	Fukomys_damarensis
ENSEEUG00000007440	-	75	75.556	ENSGMOG00000018161	SNRPN	93	72.642	Gadus_morhua
ENSEEUG00000007440	-	90	72.558	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSEEUG00000007440	-	100	98.745	ENSGGOG00000003988	SNRPN	99	98.745	Gorilla_gorilla
ENSEEUG00000007440	-	100	98.745	ENSHGLG00000011924	SNRPN	99	98.745	Heterocephalus_glaber_female
ENSEEUG00000007440	-	90	79.907	ENSHGLG00000020936	-	87	79.245	Heterocephalus_glaber_female
ENSEEUG00000007440	-	89	90.094	ENSHGLG00000019812	-	88	89.623	Heterocephalus_glaber_female
ENSEEUG00000007440	-	100	84.100	ENSHGLG00000002327	-	91	83.636	Heterocephalus_glaber_female
ENSEEUG00000007440	-	100	81.590	ENSHGLG00100004881	-	91	81.818	Heterocephalus_glaber_male
ENSEEUG00000007440	-	89	90.094	ENSHGLG00100021056	-	88	89.623	Heterocephalus_glaber_male
ENSEEUG00000007440	-	100	98.745	ENSHGLG00100016559	SNRPN	99	98.745	Heterocephalus_glaber_male
ENSEEUG00000007440	-	100	98.745	ENSSTOG00000001339	SNRPN	99	98.745	Ictidomys_tridecemlineatus
ENSEEUG00000007440	-	100	98.745	ENSLAFG00000009458	SNRPN	99	98.745	Loxodonta_africana
ENSEEUG00000007440	-	100	98.745	ENSMFAG00000042235	SNRPN	99	98.745	Macaca_fascicularis
ENSEEUG00000007440	-	100	98.745	ENSMMUG00000023139	SNURF	99	98.745	Macaca_mulatta
ENSEEUG00000007440	-	100	98.745	ENSMNEG00000031291	SNRPN	99	98.745	Macaca_nemestrina
ENSEEUG00000007440	-	100	98.745	ENSMLEG00000038837	SNRPN	99	98.745	Mandrillus_leucophaeus
ENSEEUG00000007440	-	92	85.455	ENSMGAG00000008696	SNRPN	92	85.455	Meleagris_gallopavo
ENSEEUG00000007440	-	100	98.745	ENSMAUG00000000051	Snrpn	99	98.745	Mesocricetus_auratus
ENSEEUG00000007440	-	100	98.745	ENSMICG00000042356	SNRPN	99	98.745	Microcebus_murinus
ENSEEUG00000007440	-	100	98.745	ENSMOCG00000015350	Snrpn	99	98.745	Microtus_ochrogaster
ENSEEUG00000007440	-	92	93.182	ENSMODG00000013926	-	92	93.182	Monodelphis_domestica
ENSEEUG00000007440	-	100	98.745	MGP_CAROLIEiJ_G0029815	Snrpn	99	98.745	Mus_caroli
ENSEEUG00000007440	-	100	98.745	ENSMUSG00000102252	Snrpn	99	98.745	Mus_musculus
ENSEEUG00000007440	-	100	98.745	MGP_PahariEiJ_G0013040	Snrpn	99	98.745	Mus_pahari
ENSEEUG00000007440	-	100	98.745	MGP_SPRETEiJ_G0030918	Snrpn	99	98.745	Mus_spretus
ENSEEUG00000007440	-	100	99.163	ENSMPUG00000014638	-	99	99.163	Mustela_putorius_furo
ENSEEUG00000007440	-	83	51.515	ENSMPUG00000007115	-	60	73.643	Mustela_putorius_furo
ENSEEUG00000007440	-	100	99.163	ENSMLUG00000023361	-	98	99.163	Myotis_lucifugus
ENSEEUG00000007440	-	95	61.842	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSEEUG00000007440	-	85	60.784	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSEEUG00000007440	-	100	98.745	ENSNGAG00000000181	Snrpn	99	98.745	Nannospalax_galili
ENSEEUG00000007440	-	100	82.427	ENSNLEG00000001376	SNRPN	99	82.427	Nomascus_leucogenys
ENSEEUG00000007440	-	100	98.326	ENSODEG00000020110	-	99	98.326	Octodon_degus
ENSEEUG00000007440	-	99	95.378	ENSODEG00000019708	-	92	98.630	Octodon_degus
ENSEEUG00000007440	-	100	98.745	ENSODEG00000013478	-	99	98.745	Octodon_degus
ENSEEUG00000007440	-	98	81.197	ENSODEG00000016065	-	87	82.126	Octodon_degus
ENSEEUG00000007440	-	100	98.333	ENSOCUG00000003532	-	99	98.333	Oryctolagus_cuniculus
ENSEEUG00000007440	-	73	92.571	ENSORLG00020007490	SNRPN	69	92.814	Oryzias_latipes_hni
ENSEEUG00000007440	-	73	92.571	ENSORLG00015003332	SNRPN	69	92.814	Oryzias_latipes_hsok
ENSEEUG00000007440	-	73	93.143	ENSOMEG00000002066	SNRPN	69	93.413	Oryzias_melastigma
ENSEEUG00000007440	-	100	98.745	ENSOGAG00000007392	SNRPN	99	98.745	Otolemur_garnettii
ENSEEUG00000007440	-	100	98.745	ENSOARG00000009080	SNRPN	99	98.745	Ovis_aries
ENSEEUG00000007440	-	100	98.745	ENSPPAG00000027650	SNRPN	99	98.745	Pan_paniscus
ENSEEUG00000007440	-	96	69.264	ENSPPAG00000034049	-	64	81.429	Pan_paniscus
ENSEEUG00000007440	-	100	99.163	ENSPPRG00000019878	-	99	99.163	Panthera_pardus
ENSEEUG00000007440	-	86	63.902	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSEEUG00000007440	-	100	98.745	ENSPTIG00000004537	SNRPN	99	98.745	Panthera_tigris_altaica
ENSEEUG00000007440	-	100	98.745	ENSPTRG00000006826	SNRPN	99	98.745	Pan_troglodytes
ENSEEUG00000007440	-	96	69.697	ENSPTRG00000052400	-	64	82.143	Pan_troglodytes
ENSEEUG00000007440	-	100	98.745	ENSPANG00000020142	SNRPN	99	98.745	Papio_anubis
ENSEEUG00000007440	-	95	94.273	ENSPEMG00000020979	-	95	94.273	Peromyscus_maniculatus_bairdii
ENSEEUG00000007440	-	92	85.455	ENSPEMG00000013920	-	91	85.909	Peromyscus_maniculatus_bairdii
ENSEEUG00000007440	-	100	98.745	ENSPEMG00000012911	-	99	98.745	Peromyscus_maniculatus_bairdii
ENSEEUG00000007440	-	92	94.091	ENSPCIG00000004699	-	70	94.091	Phascolarctos_cinereus
ENSEEUG00000007440	-	72	93.023	ENSPMEG00000020674	SNRPN	69	92.814	Poecilia_mexicana
ENSEEUG00000007440	-	100	98.745	ENSPPYG00000006269	SNURF	99	98.745	Pongo_abelii
ENSEEUG00000007440	-	100	98.745	ENSPCOG00000014231	SNRPN	99	98.745	Propithecus_coquereli
ENSEEUG00000007440	-	100	98.745	ENSRNOG00000059764	Snrpn	99	98.745	Rattus_norvegicus
ENSEEUG00000007440	-	100	98.745	ENSRBIG00000041765	SNRPN	99	98.745	Rhinopithecus_bieti
ENSEEUG00000007440	-	100	98.745	ENSRROG00000035157	SNRPN	99	98.745	Rhinopithecus_roxellana
ENSEEUG00000007440	-	100	98.745	ENSSBOG00000000110	-	99	98.745	Saimiri_boliviensis_boliviensis
ENSEEUG00000007440	-	100	97.908	ENSSBOG00000024929	-	99	97.908	Saimiri_boliviensis_boliviensis
ENSEEUG00000007440	-	92	94.091	ENSSHAG00000010257	-	90	94.091	Sarcophilus_harrisii
ENSEEUG00000007440	-	100	77.824	ENSSARG00000000072	SNRPN	100	77.824	Sorex_araneus
ENSEEUG00000007440	-	100	99.163	ENSSSCG00000028124	SNRPN	100	99.569	Sus_scrofa
ENSEEUG00000007440	-	100	98.745	ENSTTRG00000010966	SNRPN	88	98.745	Tursiops_truncatus
ENSEEUG00000007440	-	93	99.103	ENSUAMG00000016284	SNRPN	78	99.103	Ursus_americanus
ENSEEUG00000007440	-	100	99.163	ENSUMAG00000025589	SNRPN	99	99.163	Ursus_maritimus
ENSEEUG00000007440	-	95	99.123	ENSVVUG00000017971	SNRPN	93	99.123	Vulpes_vulpes