EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000007480 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 22936 bases
Position: chrGeneScaffold_4062:218156-241091
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000006833	PRP4	PF08799.11	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000007493	PRPF4-201	1374	-	ENSEEUP00000006833	458 (aa)	-	UPI0000F640D6

Gene Model

Click here to download ENSEEUG00000007480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000007480's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000007480	PRPF4	100	78.384	ENSG00000136875	PRPF4	100	78.384	Homo_sapiens
ENSEEUG00000007480	PRPF4	96	61.678	ENSAPOG00000014132	prpf4	90	61.678	Acanthochromis_polyacanthus
ENSEEUG00000007480	PRPF4	100	78.384	ENSAMEG00000013048	PRPF4	98	78.384	Ailuropoda_melanoleuca
ENSEEUG00000007480	PRPF4	96	61.364	ENSACIG00000005579	prpf4	84	81.590	Amphilophus_citrinellus
ENSEEUG00000007480	PRPF4	96	61.451	ENSAOCG00000005457	prpf4	84	81.172	Amphiprion_ocellaris
ENSEEUG00000007480	PRPF4	96	61.224	ENSAPEG00000000776	prpf4	84	81.172	Amphiprion_percula
ENSEEUG00000007480	PRPF4	96	60.682	ENSATEG00000023013	prpf4	84	80.335	Anabas_testudineus
ENSEEUG00000007480	PRPF4	98	70.953	ENSAPLG00000006534	PRPF4	82	93.305	Anas_platyrhynchos
ENSEEUG00000007480	PRPF4	100	70.652	ENSACAG00000015110	PRPF4	86	94.142	Anolis_carolinensis
ENSEEUG00000007480	PRPF4	100	78.603	ENSANAG00000022464	PRPF4	96	78.603	Aotus_nancymaae
ENSEEUG00000007480	PRPF4	96	60.909	ENSACLG00000019031	prpf4	98	60.909	Astatotilapia_calliptera
ENSEEUG00000007480	PRPF4	96	48.993	ENSAMXG00000006756	prpf4	70	68.201	Astyanax_mexicanus
ENSEEUG00000007480	PRPF4	100	77.729	ENSBTAG00000004571	PRPF4	100	77.729	Bos_taurus
ENSEEUG00000007480	PRPF4	77	39.943	WBGene00007972	prp-4	69	54.762	Caenorhabditis_elegans
ENSEEUG00000007480	PRPF4	100	78.821	ENSCJAG00000017856	PRPF4	100	78.821	Callithrix_jacchus
ENSEEUG00000007480	PRPF4	100	78.384	ENSCAFG00000003224	PRPF4	97	78.384	Canis_familiaris
ENSEEUG00000007480	PRPF4	100	78.384	ENSCAFG00020022637	PRPF4	100	78.384	Canis_lupus_dingo
ENSEEUG00000007480	PRPF4	100	78.603	ENSCHIG00000024648	-	100	78.603	Capra_hircus
ENSEEUG00000007480	PRPF4	100	78.384	ENSTSYG00000010366	PRPF4	100	78.384	Carlito_syrichta
ENSEEUG00000007480	PRPF4	58	97.619	ENSCAPG00000008935	PRPF4	63	97.619	Cavia_aperea
ENSEEUG00000007480	PRPF4	100	78.166	ENSCPOG00000010747	-	100	78.166	Cavia_porcellus
ENSEEUG00000007480	PRPF4	100	74.672	ENSCPOG00000014729	-	75	94.979	Cavia_porcellus
ENSEEUG00000007480	PRPF4	100	78.603	ENSCCAG00000028990	PRPF4	100	78.603	Cebus_capucinus
ENSEEUG00000007480	PRPF4	100	78.166	ENSCATG00000021552	PRPF4	100	78.166	Cercocebus_atys
ENSEEUG00000007480	PRPF4	100	78.384	ENSCLAG00000013448	PRPF4	100	78.384	Chinchilla_lanigera
ENSEEUG00000007480	PRPF4	78	78.310	ENSCHOG00000007233	PRPF4	93	78.310	Choloepus_hoffmanni
ENSEEUG00000007480	PRPF4	83	93.305	ENSCPBG00000019136	PRPF4	64	93.305	Chrysemys_picta_bellii
ENSEEUG00000007480	PRPF4	96	45.805	ENSCING00000001299	-	81	67.373	Ciona_intestinalis
ENSEEUG00000007480	PRPF4	94	45.833	ENSCSAVG00000009178	-	80	65.690	Ciona_savignyi
ENSEEUG00000007480	PRPF4	100	78.384	ENSCANG00000003246	PRPF4	100	78.384	Colobus_angolensis_palliatus
ENSEEUG00000007480	PRPF4	100	78.384	ENSCGRG00001016992	Prpf4	100	78.384	Cricetulus_griseus_chok1gshd
ENSEEUG00000007480	PRPF4	100	78.384	ENSCGRG00000017560	Prpf4	100	78.384	Cricetulus_griseus_crigri
ENSEEUG00000007480	PRPF4	96	59.864	ENSCSEG00000020451	prpf4	84	79.916	Cynoglossus_semilaevis
ENSEEUG00000007480	PRPF4	96	62.132	ENSDARG00000067639	prpf4	99	62.132	Danio_rerio
ENSEEUG00000007480	PRPF4	100	77.729	ENSDNOG00000013203	PRPF4	100	77.729	Dasypus_novemcinctus
ENSEEUG00000007480	PRPF4	100	78.166	ENSDORG00000026275	Prpf4	100	78.166	Dipodomys_ordii
ENSEEUG00000007480	PRPF4	78	48.883	FBgn0036733	U4-U6-60K	62	60.996	Drosophila_melanogaster
ENSEEUG00000007480	PRPF4	100	77.560	ENSETEG00000020389	PRPF4	100	77.560	Echinops_telfairi
ENSEEUG00000007480	PRPF4	79	79.498	ENSEBUG00000015229	prpf4	71	79.498	Eptatretus_burgeri
ENSEEUG00000007480	PRPF4	100	78.603	ENSEASG00005022678	PRPF4	100	78.603	Equus_asinus_asinus
ENSEEUG00000007480	PRPF4	100	78.603	ENSECAG00000007072	PRPF4	100	78.603	Equus_caballus
ENSEEUG00000007480	PRPF4	96	64.626	ENSELUG00000007510	prpf4	84	83.264	Esox_lucius
ENSEEUG00000007480	PRPF4	100	78.821	ENSFCAG00000005514	PRPF4	100	78.821	Felis_catus
ENSEEUG00000007480	PRPF4	98	69.488	ENSFALG00000005423	PRPF4	76	91.632	Ficedula_albicollis
ENSEEUG00000007480	PRPF4	100	78.384	ENSFDAG00000005839	PRPF4	100	78.384	Fukomys_damarensis
ENSEEUG00000007480	PRPF4	83	81.172	ENSFHEG00000001300	prpf4	84	81.172	Fundulus_heteroclitus
ENSEEUG00000007480	PRPF4	97	70.852	ENSGALG00000008857	PRPF4	82	92.887	Gallus_gallus
ENSEEUG00000007480	PRPF4	74	50.882	ENSGAFG00000012164	prpf4	55	80.328	Gambusia_affinis
ENSEEUG00000007480	PRPF4	95	55.455	ENSGACG00000015476	prpf4	83	72.083	Gasterosteus_aculeatus
ENSEEUG00000007480	PRPF4	99	70.861	ENSGAGG00000025029	PRPF4	96	70.861	Gopherus_agassizii
ENSEEUG00000007480	PRPF4	100	78.166	ENSGGOG00000006943	PRPF4	100	78.166	Gorilla_gorilla
ENSEEUG00000007480	PRPF4	96	60.682	ENSHBUG00000000562	prpf4	98	60.682	Haplochromis_burtoni
ENSEEUG00000007480	PRPF4	100	78.384	ENSHGLG00000015191	PRPF4	100	78.384	Heterocephalus_glaber_female
ENSEEUG00000007480	PRPF4	84	82.845	ENSHGLG00000016628	-	73	82.845	Heterocephalus_glaber_female
ENSEEUG00000007480	PRPF4	86	79.741	ENSHGLG00000003838	-	72	79.741	Heterocephalus_glaber_female
ENSEEUG00000007480	PRPF4	86	79.741	ENSHGLG00100005571	-	72	79.741	Heterocephalus_glaber_male
ENSEEUG00000007480	PRPF4	96	62.585	ENSIPUG00000017956	PRPF4	99	62.585	Ictalurus_punctatus
ENSEEUG00000007480	PRPF4	100	78.166	ENSSTOG00000027833	PRPF4	100	78.166	Ictidomys_tridecemlineatus
ENSEEUG00000007480	PRPF4	100	78.821	ENSJJAG00000008838	Prpf4	100	78.821	Jaculus_jaculus
ENSEEUG00000007480	PRPF4	96	59.819	ENSKMAG00000013236	prpf4	84	80.335	Kryptolebias_marmoratus
ENSEEUG00000007480	PRPF4	96	60.959	ENSLBEG00000020611	prpf4	84	81.590	Labrus_bergylta
ENSEEUG00000007480	PRPF4	80	80.342	ENSLACG00000016317	PRPF4	82	80.342	Latimeria_chalumnae
ENSEEUG00000007480	PRPF4	96	64.626	ENSLOCG00000000581	prpf4	99	64.626	Lepisosteus_oculatus
ENSEEUG00000007480	PRPF4	100	77.293	ENSLAFG00000018225	PRPF4	100	77.293	Loxodonta_africana
ENSEEUG00000007480	PRPF4	100	77.948	ENSMFAG00000039397	PRPF4	100	77.948	Macaca_fascicularis
ENSEEUG00000007480	PRPF4	100	78.166	ENSMMUG00000005844	PRPF4	100	78.166	Macaca_mulatta
ENSEEUG00000007480	PRPF4	100	66.157	ENSMNEG00000033737	PRPF4	100	66.157	Macaca_nemestrina
ENSEEUG00000007480	PRPF4	100	78.166	ENSMLEG00000040284	PRPF4	100	78.166	Mandrillus_leucophaeus
ENSEEUG00000007480	PRPF4	96	60.722	ENSMAMG00000020141	prpf4	99	60.722	Mastacembelus_armatus
ENSEEUG00000007480	PRPF4	96	60.909	ENSMZEG00005023205	prpf4	98	60.909	Maylandia_zebra
ENSEEUG00000007480	PRPF4	99	69.231	ENSMGAG00000001796	PRPF4	83	92.887	Meleagris_gallopavo
ENSEEUG00000007480	PRPF4	100	78.821	ENSMAUG00000018022	Prpf4	100	78.821	Mesocricetus_auratus
ENSEEUG00000007480	PRPF4	100	78.166	ENSMICG00000015022	PRPF4	100	78.166	Microcebus_murinus
ENSEEUG00000007480	PRPF4	100	77.729	ENSMOCG00000018273	Prpf4	100	77.729	Microtus_ochrogaster
ENSEEUG00000007480	PRPF4	96	59.864	ENSMMOG00000021177	prpf4	99	59.864	Mola_mola
ENSEEUG00000007480	PRPF4	100	74.292	ENSMODG00000025096	-	97	74.292	Monodelphis_domestica
ENSEEUG00000007480	PRPF4	100	75.217	ENSMODG00000004444	-	100	75.217	Monodelphis_domestica
ENSEEUG00000007480	PRPF4	96	60.909	ENSMALG00000013624	prpf4	98	60.909	Monopterus_albus
ENSEEUG00000007480	PRPF4	100	78.166	MGP_CAROLIEiJ_G0026078	Prpf4	100	78.166	Mus_caroli
ENSEEUG00000007480	PRPF4	100	78.166	ENSMUSG00000066148	Prpf4	100	78.166	Mus_musculus
ENSEEUG00000007480	PRPF4	100	77.948	MGP_PahariEiJ_G0028413	Prpf4	100	77.948	Mus_pahari
ENSEEUG00000007480	PRPF4	100	78.166	MGP_SPRETEiJ_G0027042	Prpf4	100	78.166	Mus_spretus
ENSEEUG00000007480	PRPF4	100	78.384	ENSMPUG00000007883	PRPF4	100	78.384	Mustela_putorius_furo
ENSEEUG00000007480	PRPF4	100	76.856	ENSMLUG00000008626	-	97	76.856	Myotis_lucifugus
ENSEEUG00000007480	PRPF4	100	78.166	ENSMLUG00000015309	-	97	78.166	Myotis_lucifugus
ENSEEUG00000007480	PRPF4	84	86.611	ENSNGAG00000000468	Prpf4	85	86.611	Nannospalax_galili
ENSEEUG00000007480	PRPF4	96	61.136	ENSNBRG00000007972	prpf4	98	61.136	Neolamprologus_brichardi
ENSEEUG00000007480	PRPF4	100	78.603	ENSNLEG00000016647	PRPF4	100	78.603	Nomascus_leucogenys
ENSEEUG00000007480	PRPF4	97	75.056	ENSMEUG00000013256	PRPF4	99	75.056	Notamacropus_eugenii
ENSEEUG00000007480	PRPF4	100	78.603	ENSOPRG00000005302	PRPF4	100	78.603	Ochotona_princeps
ENSEEUG00000007480	PRPF4	100	78.603	ENSODEG00000018147	PRPF4	100	78.603	Octodon_degus
ENSEEUG00000007480	PRPF4	99	59.389	ENSONIG00000012671	prpf4	85	80.753	Oreochromis_niloticus
ENSEEUG00000007480	PRPF4	100	78.384	ENSOCUG00000005046	PRPF4	100	78.384	Oryctolagus_cuniculus
ENSEEUG00000007480	PRPF4	95	60.092	ENSORLG00000019641	prpf4	98	60.092	Oryzias_latipes
ENSEEUG00000007480	PRPF4	95	60.092	ENSORLG00020019438	prpf4	98	60.092	Oryzias_latipes_hni
ENSEEUG00000007480	PRPF4	95	59.404	ENSOMEG00000020941	prpf4	84	79.079	Oryzias_melastigma
ENSEEUG00000007480	PRPF4	84	88.285	ENSOGAG00000007802	PRPF4	84	88.285	Otolemur_garnettii
ENSEEUG00000007480	PRPF4	100	78.384	ENSOARG00000006319	PRPF4	97	78.384	Ovis_aries
ENSEEUG00000007480	PRPF4	100	78.166	ENSPPAG00000041797	PRPF4	100	78.166	Pan_paniscus
ENSEEUG00000007480	PRPF4	100	78.603	ENSPPRG00000014360	PRPF4	100	78.603	Panthera_pardus
ENSEEUG00000007480	PRPF4	100	78.603	ENSPTIG00000009574	PRPF4	100	78.603	Panthera_tigris_altaica
ENSEEUG00000007480	PRPF4	100	78.384	ENSPTRG00000021274	PRPF4	100	78.384	Pan_troglodytes
ENSEEUG00000007480	PRPF4	100	78.166	ENSPANG00000025776	PRPF4	96	78.166	Papio_anubis
ENSEEUG00000007480	PRPF4	84	84.937	ENSPKIG00000017259	prpf4	84	84.937	Paramormyrops_kingsleyae
ENSEEUG00000007480	PRPF4	98	70.889	ENSPSIG00000010713	PRPF4	90	70.889	Pelodiscus_sinensis
ENSEEUG00000007480	PRPF4	98	43.035	ENSPMGG00000000997	prpf4	72	50.794	Periophthalmus_magnuspinnatus
ENSEEUG00000007480	PRPF4	100	78.384	ENSPEMG00000024115	Prpf4	100	78.384	Peromyscus_maniculatus_bairdii
ENSEEUG00000007480	PRPF4	100	72.574	ENSPCIG00000003821	PRPF4	99	75.056	Phascolarctos_cinereus
ENSEEUG00000007480	PRPF4	95	53.499	ENSPFOG00000013524	prpf4	75	79.508	Poecilia_formosa
ENSEEUG00000007480	PRPF4	57	80.328	ENSPLAG00000011620	prpf4	78	80.328	Poecilia_latipinna
ENSEEUG00000007480	PRPF4	72	53.916	ENSPMEG00000006813	prpf4	76	81.061	Poecilia_mexicana
ENSEEUG00000007480	PRPF4	98	78.000	ENSPCAG00000002561	PRPF4	100	78.000	Procavia_capensis
ENSEEUG00000007480	PRPF4	100	78.384	ENSPCOG00000011975	PRPF4	100	78.384	Propithecus_coquereli
ENSEEUG00000007480	PRPF4	84	91.632	ENSPVAG00000004708	PRPF4	86	91.632	Pteropus_vampyrus
ENSEEUG00000007480	PRPF4	96	60.909	ENSPNYG00000008013	prpf4	98	60.909	Pundamilia_nyererei
ENSEEUG00000007480	PRPF4	96	64.172	ENSPNAG00000000697	prpf4	84	83.682	Pygocentrus_nattereri
ENSEEUG00000007480	PRPF4	100	78.384	ENSRNOG00000014777	Prpf4	100	78.384	Rattus_norvegicus
ENSEEUG00000007480	PRPF4	100	78.384	ENSRBIG00000040221	PRPF4	100	78.384	Rhinopithecus_bieti
ENSEEUG00000007480	PRPF4	100	78.384	ENSRROG00000040240	PRPF4	100	78.384	Rhinopithecus_roxellana
ENSEEUG00000007480	PRPF4	100	75.000	ENSSHAG00000017658	PRPF4	100	75.000	Sarcophilus_harrisii
ENSEEUG00000007480	PRPF4	96	65.306	ENSSFOG00015008963	prpf4	84	85.356	Scleropages_formosus
ENSEEUG00000007480	PRPF4	96	60.682	ENSSMAG00000008889	prpf4	84	80.335	Scophthalmus_maximus
ENSEEUG00000007480	PRPF4	96	60.682	ENSSDUG00000022083	prpf4	71	81.172	Seriola_dumerili
ENSEEUG00000007480	PRPF4	96	60.909	ENSSLDG00000008115	prpf4	71	81.172	Seriola_lalandi_dorsalis
ENSEEUG00000007480	PRPF4	100	71.179	ENSSPUG00000015582	PRPF4	100	71.179	Sphenodon_punctatus
ENSEEUG00000007480	PRPF4	76	79.752	ENSSPAG00000011286	prpf4	87	79.752	Stegastes_partitus
ENSEEUG00000007480	PRPF4	100	78.603	ENSSSCG00000024648	PRPF4	100	78.603	Sus_scrofa
ENSEEUG00000007480	PRPF4	94	70.862	ENSTGUG00000002623	PRPF4	85	92.050	Taeniopygia_guttata
ENSEEUG00000007480	PRPF4	77	81.172	ENSTRUG00000008853	prpf4	87	81.172	Takifugu_rubripes
ENSEEUG00000007480	PRPF4	96	59.864	ENSTNIG00000013250	prpf4	84	79.916	Tetraodon_nigroviridis
ENSEEUG00000007480	PRPF4	82	99.034	ENSTBEG00000000821	PRPF4	80	99.034	Tupaia_belangeri
ENSEEUG00000007480	PRPF4	63	100.000	ENSTTRG00000003246	PRPF4	63	100.000	Tursiops_truncatus
ENSEEUG00000007480	PRPF4	57	90.517	ENSUAMG00000018288	PRPF4	70	90.517	Ursus_americanus
ENSEEUG00000007480	PRPF4	100	77.511	ENSUMAG00000019375	PRPF4	100	77.511	Ursus_maritimus
ENSEEUG00000007480	PRPF4	100	78.166	ENSVPAG00000005281	PRPF4	100	78.166	Vicugna_pacos
ENSEEUG00000007480	PRPF4	100	76.129	ENSVVUG00000002476	PRPF4	100	76.129	Vulpes_vulpes
ENSEEUG00000007480	PRPF4	52	63.559	ENSXCOG00000006101	prpf4	61	63.559	Xiphophorus_couchianus
ENSEEUG00000007480	PRPF4	95	50.688	ENSXMAG00000002750	prpf4	77	63.559	Xiphophorus_maculatus