EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000007530 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 4109 bases
Position: chrGeneScaffold_8884:600-4708
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000006837	APOBEC_N	PF08210.11	1.4e-22	1	1
ENSEEUP00000006837	APOBEC_C	PF05240.14	7.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000007499	-	630	-	ENSEEUP00000006837	210 (aa)	-	UPI0000F610E6

Gene Model

Click here to download ENSEEUG00000007530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000007530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000007530	-	100	76.667	ENSEEUG00000009112	-	93	76.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000007530	-	97	53.922	ENSG00000111701	APOBEC1	86	53.922	Homo_sapiens
ENSEEUG00000007530	-	97	53.922	ENSAMEG00000007098	APOBEC1	86	53.922	Ailuropoda_melanoleuca
ENSEEUG00000007530	-	62	44.697	ENSACAG00000028578	-	72	44.697	Anolis_carolinensis
ENSEEUG00000007530	-	100	53.333	ENSANAG00000027743	APOBEC1	85	53.333	Aotus_nancymaae
ENSEEUG00000007530	-	97	51.471	ENSBTAG00000014683	APOBEC1	86	51.471	Bos_taurus
ENSEEUG00000007530	-	97	54.902	ENSCJAG00000005398	APOBEC1	92	54.902	Callithrix_jacchus
ENSEEUG00000007530	-	97	53.922	ENSCAFG00000013901	APOBEC1	86	53.922	Canis_familiaris
ENSEEUG00000007530	-	97	53.922	ENSCAFG00020003511	APOBEC1	85	53.922	Canis_lupus_dingo
ENSEEUG00000007530	-	97	53.431	ENSCHIG00000011898	APOBEC1	88	50.490	Capra_hircus
ENSEEUG00000007530	-	63	67.424	ENSTSYG00000029141	APOBEC1	94	67.424	Carlito_syrichta
ENSEEUG00000007530	-	97	48.529	ENSCAPG00000015882	-	95	48.529	Cavia_aperea
ENSEEUG00000007530	-	97	48.039	ENSCPOG00000033068	APOBEC1	86	48.039	Cavia_porcellus
ENSEEUG00000007530	-	97	54.412	ENSCCAG00000022258	APOBEC1	86	54.412	Cebus_capucinus
ENSEEUG00000007530	-	97	53.922	ENSCATG00000021613	APOBEC1	82	53.922	Cercocebus_atys
ENSEEUG00000007530	-	97	51.471	ENSCLAG00000014645	APOBEC1	89	51.471	Chinchilla_lanigera
ENSEEUG00000007530	-	82	52.023	ENSCSAG00000009817	APOBEC1	91	52.023	Chlorocebus_sabaeus
ENSEEUG00000007530	-	58	46.341	ENSCPBG00000014328	-	54	46.341	Chrysemys_picta_bellii
ENSEEUG00000007530	-	59	43.651	ENSCPBG00000017398	-	56	43.651	Chrysemys_picta_bellii
ENSEEUG00000007530	-	61	48.837	ENSCPBG00000014331	-	53	48.837	Chrysemys_picta_bellii
ENSEEUG00000007530	-	61	50.769	ENSCPBG00000014335	-	53	50.769	Chrysemys_picta_bellii
ENSEEUG00000007530	-	97	54.412	ENSCANG00000038359	APOBEC1	89	54.412	Colobus_angolensis_palliatus
ENSEEUG00000007530	-	97	50.000	ENSCGRG00001011130	Apobec1	89	50.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000007530	-	97	50.000	ENSCGRG00000008644	Apobec1	89	50.000	Cricetulus_griseus_crigri
ENSEEUG00000007530	-	97	53.922	ENSDNOG00000010926	APOBEC1	86	53.922	Dasypus_novemcinctus
ENSEEUG00000007530	-	97	45.098	ENSDORG00000023717	Apobec1	96	45.366	Dipodomys_ordii
ENSEEUG00000007530	-	97	53.171	ENSETEG00000004867	APOBEC1	87	53.171	Echinops_telfairi
ENSEEUG00000007530	-	97	53.922	ENSEASG00005015951	APOBEC1	86	53.922	Equus_asinus_asinus
ENSEEUG00000007530	-	82	50.867	ENSECAG00000017163	APOBEC1	91	50.867	Equus_caballus
ENSEEUG00000007530	-	97	55.882	ENSFCAG00000009350	APOBEC1	86	55.882	Felis_catus
ENSEEUG00000007530	-	61	45.802	ENSFALG00000007257	-	64	45.802	Ficedula_albicollis
ENSEEUG00000007530	-	94	46.193	ENSFDAG00000018470	APOBEC1	95	46.193	Fukomys_damarensis
ENSEEUG00000007530	-	61	41.860	ENSGAGG00000021744	-	51	41.860	Gopherus_agassizii
ENSEEUG00000007530	-	96	39.216	ENSGAGG00000011837	-	85	39.216	Gopherus_agassizii
ENSEEUG00000007530	-	61	51.538	ENSGAGG00000004947	-	83	50.388	Gopherus_agassizii
ENSEEUG00000007530	-	97	52.451	ENSHGLG00000001495	APOBEC1	86	52.451	Heterocephalus_glaber_female
ENSEEUG00000007530	-	97	52.941	ENSHGLG00100002187	APOBEC1	86	52.941	Heterocephalus_glaber_male
ENSEEUG00000007530	-	97	54.412	ENSSTOG00000021971	APOBEC1	100	69.388	Ictidomys_tridecemlineatus
ENSEEUG00000007530	-	97	49.510	ENSJJAG00000022108	Apobec1	89	49.510	Jaculus_jaculus
ENSEEUG00000007530	-	97	53.431	ENSLAFG00000030837	APOBEC1	91	53.431	Loxodonta_africana
ENSEEUG00000007530	-	97	54.412	ENSMFAG00000000277	APOBEC1	91	52.023	Macaca_fascicularis
ENSEEUG00000007530	-	97	54.412	ENSMNEG00000029670	APOBEC1	86	54.412	Macaca_nemestrina
ENSEEUG00000007530	-	97	53.922	ENSMLEG00000036301	APOBEC1	86	53.922	Mandrillus_leucophaeus
ENSEEUG00000007530	-	97	50.000	ENSMAUG00000022167	Apobec1	92	50.000	Mesocricetus_auratus
ENSEEUG00000007530	-	97	55.882	ENSMICG00000043645	APOBEC1	89	55.882	Microcebus_murinus
ENSEEUG00000007530	-	98	48.293	ENSMODG00000018004	APOBEC1	87	48.293	Monodelphis_domestica
ENSEEUG00000007530	-	97	50.980	ENSMUSG00000040613	Apobec1	88	64.151	Mus_musculus
ENSEEUG00000007530	-	97	51.471	MGP_PahariEiJ_G0022580	-	88	65.094	Mus_pahari
ENSEEUG00000007530	-	97	50.980	MGP_SPRETEiJ_G0029857	Apobec1	88	64.151	Mus_spretus
ENSEEUG00000007530	-	97	52.941	ENSMPUG00000017532	APOBEC1	86	52.941	Mustela_putorius_furo
ENSEEUG00000007530	-	97	50.980	ENSNGAG00000022607	Apobec1	89	50.980	Nannospalax_galili
ENSEEUG00000007530	-	97	53.431	ENSNLEG00000005342	APOBEC1	86	53.431	Nomascus_leucogenys
ENSEEUG00000007530	-	97	46.078	ENSMEUG00000013406	APOBEC1	86	46.078	Notamacropus_eugenii
ENSEEUG00000007530	-	62	61.538	ENSOPRG00000009508	-	72	61.538	Ochotona_princeps
ENSEEUG00000007530	-	97	52.451	ENSOCUG00000025736	APOBEC1	76	52.451	Oryctolagus_cuniculus
ENSEEUG00000007530	-	97	56.373	ENSOGAG00000026415	APOBEC1	86	56.373	Otolemur_garnettii
ENSEEUG00000007530	-	97	52.941	ENSOARG00000002072	APOBEC1	85	52.941	Ovis_aries
ENSEEUG00000007530	-	97	49.510	ENSPPAG00000027657	APOBEC1	85	49.510	Pan_paniscus
ENSEEUG00000007530	-	97	55.882	ENSPPRG00000012182	APOBEC1	86	55.882	Panthera_pardus
ENSEEUG00000007530	-	97	55.882	ENSPTIG00000020280	APOBEC1	86	55.882	Panthera_tigris_altaica
ENSEEUG00000007530	-	97	54.412	ENSPTRG00000004614	APOBEC1	86	54.412	Pan_troglodytes
ENSEEUG00000007530	-	97	53.922	ENSPANG00000021027	APOBEC1	86	53.922	Papio_anubis
ENSEEUG00000007530	-	61	44.961	ENSPSIG00000012568	-	56	44.961	Pelodiscus_sinensis
ENSEEUG00000007530	-	97	49.510	ENSPEMG00000023841	Apobec1	89	49.510	Peromyscus_maniculatus_bairdii
ENSEEUG00000007530	-	98	47.317	ENSPCIG00000023973	APOBEC1	87	47.317	Phascolarctos_cinereus
ENSEEUG00000007530	-	97	53.431	ENSPPYG00000004228	APOBEC1	82	53.431	Pongo_abelii
ENSEEUG00000007530	-	63	66.667	ENSPCAG00000008733	APOBEC1	71	66.667	Procavia_capensis
ENSEEUG00000007530	-	97	55.882	ENSPCOG00000013957	APOBEC1	90	55.882	Propithecus_coquereli
ENSEEUG00000007530	-	97	71.078	ENSPVAG00000010709	APOBEC1	86	71.078	Pteropus_vampyrus
ENSEEUG00000007530	-	97	49.510	ENSRNOG00000015411	Apobec1	89	49.510	Rattus_norvegicus
ENSEEUG00000007530	-	97	53.922	ENSRBIG00000031161	APOBEC1	86	53.922	Rhinopithecus_bieti
ENSEEUG00000007530	-	97	53.922	ENSRROG00000033576	APOBEC1	91	51.445	Rhinopithecus_roxellana
ENSEEUG00000007530	-	63	67.424	ENSSBOG00000030587	APOBEC1	75	67.424	Saimiri_boliviensis_boliviensis
ENSEEUG00000007530	-	98	47.805	ENSSHAG00000008925	APOBEC1	90	47.805	Sarcophilus_harrisii
ENSEEUG00000007530	-	62	68.702	ENSSARG00000000032	-	76	68.702	Sorex_araneus
ENSEEUG00000007530	-	61	70.543	ENSSARG00000011972	-	98	70.543	Sorex_araneus
ENSEEUG00000007530	-	61	43.511	ENSSPUG00000009044	-	50	43.511	Sphenodon_punctatus
ENSEEUG00000007530	-	97	55.392	ENSSSCG00000000668	APOBEC1	86	55.392	Sus_scrofa
ENSEEUG00000007530	-	61	48.485	ENSTGUG00000013118	-	89	48.485	Taeniopygia_guttata
ENSEEUG00000007530	-	97	53.922	ENSTBEG00000010043	APOBEC1	86	53.922	Tupaia_belangeri
ENSEEUG00000007530	-	63	62.121	ENSTTRG00000014015	APOBEC1	71	62.121	Tursiops_truncatus
ENSEEUG00000007530	-	98	53.140	ENSUAMG00000011636	APOBEC1	85	53.140	Ursus_americanus
ENSEEUG00000007530	-	97	52.941	ENSUMAG00000016552	APOBEC1	84	52.941	Ursus_maritimus
ENSEEUG00000007530	-	97	55.392	ENSVPAG00000001343	APOBEC1	86	55.392	Vicugna_pacos
ENSEEUG00000007530	-	97	53.922	ENSVVUG00000010522	APOBEC1	86	53.922	Vulpes_vulpes