EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000008056 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 121830 bases
Position: chrGeneScaffold_8373:418-122247
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000007364	ResIII	PF04851.15	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000008084	-	2715	-	ENSEEUP00000007364	904 (aa)	-	UPI0000F63768

Gene Model

Click here to download ENSEEUG00000008056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000008056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000008056	-	62	40.741	ENSEEUG00000008113	RAD54L	72	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000008056	-	83	81.761	ENSG00000197275	RAD54B	87	77.778	Homo_sapiens
ENSEEUG00000008056	-	70	81.761	ENSG00000265817	FSBP	88	81.761	Homo_sapiens
ENSEEUG00000008056	-	83	83.851	ENSAMEG00000005834	-	83	83.851	Ailuropoda_melanoleuca
ENSEEUG00000008056	-	72	52.500	ENSACIG00000013005	rad54b	74	52.500	Amphilophus_citrinellus
ENSEEUG00000008056	-	72	50.920	ENSAOCG00000008523	rad54b	70	52.866	Amphiprion_ocellaris
ENSEEUG00000008056	-	72	50.932	ENSAPEG00000001673	rad54b	84	52.761	Amphiprion_percula
ENSEEUG00000008056	-	72	50.314	ENSATEG00000001527	rad54b	75	50.314	Anabas_testudineus
ENSEEUG00000008056	-	77	74.214	ENSAPLG00000014366	-	76	74.214	Anas_platyrhynchos
ENSEEUG00000008056	-	72	65.605	ENSACAG00000003671	-	81	65.605	Anolis_carolinensis
ENSEEUG00000008056	-	62	79.375	ENSANAG00000019528	-	86	79.375	Aotus_nancymaae
ENSEEUG00000008056	-	72	53.750	ENSACLG00000007826	rad54b	76	53.125	Astatotilapia_calliptera
ENSEEUG00000008056	-	62	72.500	ENSAMXG00000039985	rad54b	75	72.500	Astyanax_mexicanus
ENSEEUG00000008056	-	79	84.472	ENSBTAG00000000632	RAD54B	79	84.472	Bos_taurus
ENSEEUG00000008056	-	83	80.000	ENSCJAG00000000080	-	88	80.000	Callithrix_jacchus
ENSEEUG00000008056	-	83	81.988	ENSCAFG00000009179	RAD54B	83	81.988	Canis_familiaris
ENSEEUG00000008056	-	83	82.609	ENSCAFG00020012084	-	83	82.609	Canis_lupus_dingo
ENSEEUG00000008056	-	79	84.472	ENSCHIG00000008230	-	79	84.472	Capra_hircus
ENSEEUG00000008056	-	83	85.093	ENSTSYG00000013234	-	83	85.093	Carlito_syrichta
ENSEEUG00000008056	-	83	83.851	ENSCPOG00000011643	-	83	83.851	Cavia_porcellus
ENSEEUG00000008056	-	83	80.000	ENSCCAG00000011754	-	88	80.000	Cebus_capucinus
ENSEEUG00000008056	-	83	81.132	ENSCATG00000030661	-	88	81.132	Cercocebus_atys
ENSEEUG00000008056	-	83	84.277	ENSCLAG00000010476	-	83	84.277	Chinchilla_lanigera
ENSEEUG00000008056	-	83	81.761	ENSCSAG00000012712	-	83	81.761	Chlorocebus_sabaeus
ENSEEUG00000008056	-	79	75.472	ENSCPBG00000003204	-	76	82.222	Chrysemys_picta_bellii
ENSEEUG00000008056	-	83	81.761	ENSCANG00000017939	-	88	81.761	Colobus_angolensis_palliatus
ENSEEUG00000008056	-	80	81.646	ENSCGRG00001020184	Rad54b	81	81.646	Cricetulus_griseus_chok1gshd
ENSEEUG00000008056	-	80	81.646	ENSCGRG00000016752	Rad54b	81	81.646	Cricetulus_griseus_crigri
ENSEEUG00000008056	-	72	49.000	ENSCSEG00000001601	rad54b	77	49.000	Cynoglossus_semilaevis
ENSEEUG00000008056	-	71	54.545	ENSCVAG00000009200	rad54b	73	54.545	Cyprinodon_variegatus
ENSEEUG00000008056	-	72	51.250	ENSDARG00000092134	rad54b	85	49.744	Danio_rerio
ENSEEUG00000008056	-	80	79.503	ENSDNOG00000015535	-	80	79.503	Dasypus_novemcinctus
ENSEEUG00000008056	-	83	86.335	ENSDORG00000002492	Rad54b	83	86.335	Dipodomys_ordii
ENSEEUG00000008056	-	69	100.000	ENSETEG00000010605	-	80	100.000	Echinops_telfairi
ENSEEUG00000008056	-	72	44.489	ENSEBUG00000009104	rad54b	70	44.489	Eptatretus_burgeri
ENSEEUG00000008056	-	72	83.230	ENSEASG00005004021	-	74	83.230	Equus_asinus_asinus
ENSEEUG00000008056	-	83	83.230	ENSECAG00000021949	-	82	83.230	Equus_caballus
ENSEEUG00000008056	-	72	51.829	ENSELUG00000009287	rad54b	70	51.829	Esox_lucius
ENSEEUG00000008056	-	83	85.714	ENSFCAG00000015513	-	88	85.714	Felis_catus
ENSEEUG00000008056	-	72	72.327	ENSFALG00000005467	-	71	72.327	Ficedula_albicollis
ENSEEUG00000008056	-	83	84.906	ENSFDAG00000020541	-	83	84.906	Fukomys_damarensis
ENSEEUG00000008056	-	72	51.572	ENSFHEG00000014382	rad54b	72	51.572	Fundulus_heteroclitus
ENSEEUG00000008056	-	72	47.012	ENSGMOG00000014774	rad54b	82	47.012	Gadus_morhua
ENSEEUG00000008056	-	77	74.214	ENSGALG00000043597	RAD54B	76	74.214	Gallus_gallus
ENSEEUG00000008056	-	72	52.201	ENSGAFG00000007901	rad54b	76	52.201	Gambusia_affinis
ENSEEUG00000008056	-	72	52.761	ENSGACG00000009128	rad54b	71	52.761	Gasterosteus_aculeatus
ENSEEUG00000008056	-	79	76.282	ENSGAGG00000018747	-	78	76.282	Gopherus_agassizii
ENSEEUG00000008056	-	83	81.132	ENSGGOG00000023516	-	83	81.132	Gorilla_gorilla
ENSEEUG00000008056	-	72	53.374	ENSHBUG00000016017	rad54b	70	53.374	Haplochromis_burtoni
ENSEEUG00000008056	-	83	83.851	ENSHGLG00000008263	RAD54B	83	83.851	Heterocephalus_glaber_female
ENSEEUG00000008056	-	83	83.851	ENSHGLG00100008108	-	83	83.851	Heterocephalus_glaber_male
ENSEEUG00000008056	-	71	52.941	ENSHCOG00000004764	rad54b	81	50.993	Hippocampus_comes
ENSEEUG00000008056	-	72	54.375	ENSIPUG00000018531	rad54b	69	54.375	Ictalurus_punctatus
ENSEEUG00000008056	-	82	81.290	ENSSTOG00000010791	-	82	81.290	Ictidomys_tridecemlineatus
ENSEEUG00000008056	-	80	82.609	ENSJJAG00000010314	Rad54b	80	82.609	Jaculus_jaculus
ENSEEUG00000008056	-	72	48.800	ENSKMAG00000004744	rad54b	76	48.800	Kryptolebias_marmoratus
ENSEEUG00000008056	-	71	64.052	ENSLACG00000000859	-	87	64.052	Latimeria_chalumnae
ENSEEUG00000008056	-	72	60.897	ENSLOCG00000010100	rad54b	78	60.625	Lepisosteus_oculatus
ENSEEUG00000008056	-	72	83.851	ENSLAFG00000015315	-	81	83.851	Loxodonta_africana
ENSEEUG00000008056	-	83	81.132	ENSMFAG00000031629	-	88	81.132	Macaca_fascicularis
ENSEEUG00000008056	-	83	81.132	ENSMMUG00000005659	-	83	81.132	Macaca_mulatta
ENSEEUG00000008056	-	83	81.132	ENSMNEG00000016408	-	83	81.132	Macaca_nemestrina
ENSEEUG00000008056	-	83	81.761	ENSMLEG00000006946	-	83	81.761	Mandrillus_leucophaeus
ENSEEUG00000008056	-	72	51.553	ENSMAMG00000012269	rad54b	80	51.553	Mastacembelus_armatus
ENSEEUG00000008056	-	72	54.375	ENSMZEG00005005281	rad54b	79	54.375	Maylandia_zebra
ENSEEUG00000008056	-	75	78.571	ENSMGAG00000012024	-	74	78.571	Meleagris_gallopavo
ENSEEUG00000008056	-	80	78.882	ENSMAUG00000013586	Rad54b	82	78.882	Mesocricetus_auratus
ENSEEUG00000008056	-	72	82.500	ENSMICG00000000754	-	75	82.500	Microcebus_murinus
ENSEEUG00000008056	-	80	75.776	ENSMOCG00000020035	Rad54b	81	75.776	Microtus_ochrogaster
ENSEEUG00000008056	-	72	49.400	ENSMMOG00000003394	rad54b	74	49.400	Mola_mola
ENSEEUG00000008056	-	72	80.625	ENSMODG00000007343	-	81	80.625	Monodelphis_domestica
ENSEEUG00000008056	-	62	51.637	ENSMALG00000001520	rad54b	86	51.637	Monopterus_albus
ENSEEUG00000008056	-	80	80.124	MGP_CAROLIEiJ_G0025810	Rad54b	81	80.124	Mus_caroli
ENSEEUG00000008056	-	80	78.882	ENSMUSG00000078773	Rad54b	81	78.882	Mus_musculus
ENSEEUG00000008056	-	81	79.503	MGP_PahariEiJ_G0023933	Rad54b	82	79.503	Mus_pahari
ENSEEUG00000008056	-	80	80.745	MGP_SPRETEiJ_G0026758	Rad54b	81	80.745	Mus_spretus
ENSEEUG00000008056	-	72	83.851	ENSMPUG00000008878	-	81	83.851	Mustela_putorius_furo
ENSEEUG00000008056	-	82	87.500	ENSMLUG00000008953	-	81	87.500	Myotis_lucifugus
ENSEEUG00000008056	-	80	80.838	ENSNGAG00000017537	Rad54b	90	80.838	Nannospalax_galili
ENSEEUG00000008056	-	72	53.750	ENSNBRG00000013394	rad54b	76	53.750	Neolamprologus_brichardi
ENSEEUG00000008056	-	83	81.132	ENSNLEG00000003062	-	87	81.132	Nomascus_leucogenys
ENSEEUG00000008056	-	65	83.851	ENSODEG00000002650	-	79	83.851	Octodon_degus
ENSEEUG00000008056	-	83	82.609	ENSODEG00000019564	-	83	82.609	Octodon_degus
ENSEEUG00000008056	-	72	54.658	ENSONIG00000006067	rad54b	72	54.658	Oreochromis_niloticus
ENSEEUG00000008056	-	72	72.050	ENSOANG00000011348	-	87	72.050	Ornithorhynchus_anatinus
ENSEEUG00000008056	-	83	81.988	ENSOCUG00000016478	-	83	81.988	Oryctolagus_cuniculus
ENSEEUG00000008056	-	72	53.704	ENSORLG00000008918	rad54b	86	54.268	Oryzias_latipes
ENSEEUG00000008056	-	62	54.268	ENSORLG00020012171	rad54b	86	54.268	Oryzias_latipes_hni
ENSEEUG00000008056	-	72	53.988	ENSORLG00015018536	rad54b	70	53.988	Oryzias_latipes_hsok
ENSEEUG00000008056	-	72	54.878	ENSOMEG00000004345	rad54b	85	54.878	Oryzias_melastigma
ENSEEUG00000008056	-	83	80.000	ENSOGAG00000007854	-	83	80.000	Otolemur_garnettii
ENSEEUG00000008056	-	72	85.093	ENSOARG00000007691	-	81	85.093	Ovis_aries
ENSEEUG00000008056	-	83	81.132	ENSPPAG00000029572	-	84	81.132	Pan_paniscus
ENSEEUG00000008056	-	83	85.093	ENSPPRG00000007571	-	88	85.093	Panthera_pardus
ENSEEUG00000008056	-	70	85.093	ENSPTIG00000012670	-	88	85.093	Panthera_tigris_altaica
ENSEEUG00000008056	-	83	81.761	ENSPTRG00000020427	-	88	81.761	Pan_troglodytes
ENSEEUG00000008056	-	83	81.761	ENSPANG00000019566	-	83	81.761	Papio_anubis
ENSEEUG00000008056	-	65	57.792	ENSPKIG00000014974	rad54b	71	57.792	Paramormyrops_kingsleyae
ENSEEUG00000008056	-	79	69.811	ENSPSIG00000002383	-	80	69.811	Pelodiscus_sinensis
ENSEEUG00000008056	-	80	80.745	ENSPEMG00000012133	Rad54b	81	80.745	Peromyscus_maniculatus_bairdii
ENSEEUG00000008056	-	72	53.614	ENSPMAG00000002916	rad54b	82	53.614	Petromyzon_marinus
ENSEEUG00000008056	-	72	77.500	ENSPCIG00000020151	-	75	77.500	Phascolarctos_cinereus
ENSEEUG00000008056	-	72	52.174	ENSPFOG00000023411	rad54b	70	52.174	Poecilia_formosa
ENSEEUG00000008056	-	72	52.795	ENSPLAG00000010430	rad54b	70	52.795	Poecilia_latipinna
ENSEEUG00000008056	-	72	52.174	ENSPMEG00000016873	rad54b	77	51.266	Poecilia_mexicana
ENSEEUG00000008056	-	72	52.201	ENSPREG00000018443	rad54b	75	52.201	Poecilia_reticulata
ENSEEUG00000008056	-	83	82.390	ENSPPYG00000018750	-	83	82.390	Pongo_abelii
ENSEEUG00000008056	-	83	82.500	ENSPCOG00000026845	-	88	82.500	Propithecus_coquereli
ENSEEUG00000008056	-	72	85.000	ENSPVAG00000000261	-	76	85.000	Pteropus_vampyrus
ENSEEUG00000008056	-	71	55.556	ENSPNYG00000018303	rad54b	79	55.556	Pundamilia_nyererei
ENSEEUG00000008056	-	73	80.769	ENSPNAG00000000295	rad54b	79	80.769	Pygocentrus_nattereri
ENSEEUG00000008056	-	79	78.261	ENSRNOG00000039949	Rad54b	80	78.261	Rattus_norvegicus
ENSEEUG00000008056	-	83	80.503	ENSRBIG00000020419	-	83	80.503	Rhinopithecus_bieti
ENSEEUG00000008056	-	83	80.503	ENSRROG00000039897	-	83	80.503	Rhinopithecus_roxellana
ENSEEUG00000008056	-	83	80.000	ENSSBOG00000028501	-	83	80.000	Saimiri_boliviensis_boliviensis
ENSEEUG00000008056	-	79	79.114	ENSSHAG00000017038	-	78	79.114	Sarcophilus_harrisii
ENSEEUG00000008056	-	56	61.607	ENSSFOG00015008483	rad54b	69	63.590	Scleropages_formosus
ENSEEUG00000008056	-	72	51.235	ENSSMAG00000018659	rad54b	76	51.235	Scophthalmus_maximus
ENSEEUG00000008056	-	69	52.740	ENSSDUG00000001122	rad54b	66	52.740	Seriola_dumerili
ENSEEUG00000008056	-	72	50.932	ENSSLDG00000013787	rad54b	83	50.932	Seriola_lalandi_dorsalis
ENSEEUG00000008056	-	77	71.069	ENSSPUG00000016497	-	79	71.069	Sphenodon_punctatus
ENSEEUG00000008056	-	72	50.307	ENSSPAG00000012800	rad54b	75	50.307	Stegastes_partitus
ENSEEUG00000008056	-	83	83.125	ENSSSCG00000006101	-	83	83.125	Sus_scrofa
ENSEEUG00000008056	-	72	73.585	ENSTGUG00000011880	-	71	73.585	Taeniopygia_guttata
ENSEEUG00000008056	-	71	53.548	ENSTRUG00000010015	rad54b	69	53.548	Takifugu_rubripes
ENSEEUG00000008056	-	74	86.942	ENSTTRG00000006312	-	74	86.942	Tursiops_truncatus
ENSEEUG00000008056	-	83	84.472	ENSUMAG00000016401	-	83	84.472	Ursus_maritimus
ENSEEUG00000008056	-	83	85.535	ENSVPAG00000003157	-	83	85.535	Vicugna_pacos
ENSEEUG00000008056	-	74	75.000	ENSXETG00000025924	rad54b	75	75.000	Xenopus_tropicalis
ENSEEUG00000008056	-	72	51.875	ENSXMAG00000013141	rad54b	76	51.875	Xiphophorus_maculatus