EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000008077 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 25333 bases
Position: chrGeneScaffold_4240:1921-27253
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000007365	RRM_1	PF00076.22	6.8e-11	1	1
ENSEEUP00000007365	La	PF05383.17	2.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000008085	SSB-201	1035	-	ENSEEUP00000007365	345 (aa)	-	UPI0000F61FC5

Gene Model

Click here to download ENSEEUG00000008077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000008077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000008077	SSB	86	89.286	ENSG00000138385	SSB	100	97.500	Homo_sapiens
ENSEEUG00000008077	SSB	77	47.697	ENSAPOG00000003448	ssb	79	48.052	Acanthochromis_polyacanthus
ENSEEUG00000008077	SSB	78	75.490	ENSAMEG00000010507	SSB	73	75.490	Ailuropoda_melanoleuca
ENSEEUG00000008077	SSB	78	50.993	ENSACIG00000001738	ssb	88	62.602	Amphilophus_citrinellus
ENSEEUG00000008077	SSB	77	49.013	ENSAOCG00000020398	ssb	79	49.351	Amphiprion_ocellaris
ENSEEUG00000008077	SSB	77	49.013	ENSAPEG00000020395	ssb	79	49.351	Amphiprion_percula
ENSEEUG00000008077	SSB	77	50.164	ENSATEG00000016884	ssb	76	50.000	Anabas_testudineus
ENSEEUG00000008077	SSB	78	62.418	ENSAPLG00000006109	SSB	72	62.418	Anas_platyrhynchos
ENSEEUG00000008077	SSB	78	55.229	ENSACAG00000017008	SSB	75	56.536	Anolis_carolinensis
ENSEEUG00000008077	SSB	100	63.281	ENSANAG00000027195	-	100	63.281	Aotus_nancymaae
ENSEEUG00000008077	SSB	78	48.525	ENSACLG00000010798	ssb	80	48.525	Astatotilapia_calliptera
ENSEEUG00000008077	SSB	77	44.816	ENSAMXG00000012606	ssb	74	45.215	Astyanax_mexicanus
ENSEEUG00000008077	SSB	78	75.163	ENSBTAG00000008716	SSB	76	75.163	Bos_taurus
ENSEEUG00000008077	SSB	86	85.714	ENSCJAG00000045073	SSB	85	96.522	Callithrix_jacchus
ENSEEUG00000008077	SSB	78	75.490	ENSCAFG00000012418	SSB	75	75.490	Canis_familiaris
ENSEEUG00000008077	SSB	78	75.490	ENSCAFG00020002900	SSB	75	75.490	Canis_lupus_dingo
ENSEEUG00000008077	SSB	86	85.185	ENSCHIG00000022624	-	82	85.185	Capra_hircus
ENSEEUG00000008077	SSB	78	73.267	ENSCHIG00000022196	-	84	81.481	Capra_hircus
ENSEEUG00000008077	SSB	78	80.277	ENSTSYG00000000097	SSB	74	80.277	Carlito_syrichta
ENSEEUG00000008077	SSB	86	89.286	ENSCPOG00000003338	SSB	83	89.286	Cavia_porcellus
ENSEEUG00000008077	SSB	86	85.714	ENSCCAG00000035147	SSB	86	97.391	Cebus_capucinus
ENSEEUG00000008077	SSB	86	82.143	ENSCATG00000042909	-	78	82.143	Cercocebus_atys
ENSEEUG00000008077	SSB	86	89.286	ENSCATG00000036701	SSB	79	89.286	Cercocebus_atys
ENSEEUG00000008077	SSB	86	85.185	ENSCLAG00000015617	-	82	85.185	Chinchilla_lanigera
ENSEEUG00000008077	SSB	78	67.974	ENSCSAG00000018390	-	77	67.974	Chlorocebus_sabaeus
ENSEEUG00000008077	SSB	86	89.286	ENSCSAG00000015200	SSB	73	89.286	Chlorocebus_sabaeus
ENSEEUG00000008077	SSB	86	88.889	ENSCHOG00000007763	SSB	82	88.889	Choloepus_hoffmanni
ENSEEUG00000008077	SSB	78	64.052	ENSCPBG00000006519	SSB	75	65.359	Chrysemys_picta_bellii
ENSEEUG00000008077	SSB	78	55.738	ENSCANG00000028838	-	70	55.738	Colobus_angolensis_palliatus
ENSEEUG00000008077	SSB	78	61.765	ENSCANG00000033240	-	74	61.765	Colobus_angolensis_palliatus
ENSEEUG00000008077	SSB	86	89.286	ENSCANG00000027695	SSB	82	89.286	Colobus_angolensis_palliatus
ENSEEUG00000008077	SSB	78	70.820	ENSCGRG00001024831	Ssb	75	70.820	Cricetulus_griseus_chok1gshd
ENSEEUG00000008077	SSB	78	70.820	ENSCGRG00000005387	Ssb	75	70.820	Cricetulus_griseus_crigri
ENSEEUG00000008077	SSB	76	49.669	ENSCSEG00000011599	ssb	75	49.669	Cynoglossus_semilaevis
ENSEEUG00000008077	SSB	78	49.351	ENSCVAG00000021558	ssb	76	49.351	Cyprinodon_variegatus
ENSEEUG00000008077	SSB	77	46.865	ENSDARG00000029252	ssb	75	47.020	Danio_rerio
ENSEEUG00000008077	SSB	86	88.889	ENSDNOG00000013450	SSB	82	88.889	Dasypus_novemcinctus
ENSEEUG00000008077	SSB	78	74.832	ENSDORG00000005543	Ssb	75	74.832	Dipodomys_ordii
ENSEEUG00000008077	SSB	54	44.503	FBgn0011638	La	52	45.098	Drosophila_melanogaster
ENSEEUG00000008077	SSB	62	93.011	ENSETEG00000004614	-	55	93.011	Echinops_telfairi
ENSEEUG00000008077	SSB	75	42.177	ENSEBUG00000001237	ssb	76	42.177	Eptatretus_burgeri
ENSEEUG00000008077	SSB	86	85.714	ENSEASG00005022835	SSB	82	85.714	Equus_asinus_asinus
ENSEEUG00000008077	SSB	86	89.286	ENSECAG00000018495	SSB	82	89.286	Equus_caballus
ENSEEUG00000008077	SSB	77	50.993	ENSELUG00000020929	ssb	76	51.961	Esox_lucius
ENSEEUG00000008077	SSB	78	75.490	ENSFCAG00000011601	SSB	75	75.490	Felis_catus
ENSEEUG00000008077	SSB	78	61.438	ENSFALG00000000930	SSB	76	61.438	Ficedula_albicollis
ENSEEUG00000008077	SSB	86	89.286	ENSFDAG00000000598	SSB	82	89.286	Fukomys_damarensis
ENSEEUG00000008077	SSB	57	40.084	ENSFHEG00000003268	ssb	74	40.000	Fundulus_heteroclitus
ENSEEUG00000008077	SSB	75	48.822	ENSGMOG00000002664	ssb	74	48.822	Gadus_morhua
ENSEEUG00000008077	SSB	78	62.418	ENSGALG00000009677	SSB	76	62.418	Gallus_gallus
ENSEEUG00000008077	SSB	78	46.753	ENSGAFG00000002749	ssb	76	46.753	Gambusia_affinis
ENSEEUG00000008077	SSB	78	47.727	ENSGACG00000005107	ssb	75	48.052	Gasterosteus_aculeatus
ENSEEUG00000008077	SSB	78	62.745	ENSGAGG00000007807	SSB	75	64.052	Gopherus_agassizii
ENSEEUG00000008077	SSB	78	58.824	ENSGGOG00000024891	-	73	58.824	Gorilla_gorilla
ENSEEUG00000008077	SSB	78	48.052	ENSHBUG00000006584	ssb	78	48.052	Haplochromis_burtoni
ENSEEUG00000008077	SSB	78	69.281	ENSHGLG00000005832	-	78	69.281	Heterocephalus_glaber_female
ENSEEUG00000008077	SSB	78	69.481	ENSHGLG00000004478	-	76	69.481	Heterocephalus_glaber_female
ENSEEUG00000008077	SSB	53	88.587	ENSHGLG00000001810	-	85	88.587	Heterocephalus_glaber_female
ENSEEUG00000008077	SSB	86	89.286	ENSHGLG00000017580	-	81	89.286	Heterocephalus_glaber_female
ENSEEUG00000008077	SSB	78	65.246	ENSHGLG00100008767	-	76	65.246	Heterocephalus_glaber_male
ENSEEUG00000008077	SSB	86	89.286	ENSHGLG00100003084	-	81	89.286	Heterocephalus_glaber_male
ENSEEUG00000008077	SSB	75	47.651	ENSHCOG00000019011	ssb	76	47.176	Hippocampus_comes
ENSEEUG00000008077	SSB	77	49.013	ENSIPUG00000003681	SSB	73	50.000	Ictalurus_punctatus
ENSEEUG00000008077	SSB	86	88.889	ENSSTOG00000008416	SSB	82	88.889	Ictidomys_tridecemlineatus
ENSEEUG00000008077	SSB	70	62.313	ENSJJAG00000016250	-	69	62.313	Jaculus_jaculus
ENSEEUG00000008077	SSB	78	73.026	ENSJJAG00000023158	-	73	73.026	Jaculus_jaculus
ENSEEUG00000008077	SSB	78	49.351	ENSKMAG00000017317	ssb	77	49.351	Kryptolebias_marmoratus
ENSEEUG00000008077	SSB	77	47.039	ENSLBEG00000017345	ssb	77	47.403	Labrus_bergylta
ENSEEUG00000008077	SSB	78	56.209	ENSLACG00000014056	SSB	75	56.209	Latimeria_chalumnae
ENSEEUG00000008077	SSB	76	55.853	ENSLOCG00000007933	ssb	74	55.853	Lepisosteus_oculatus
ENSEEUG00000008077	SSB	78	68.750	ENSLAFG00000028909	-	76	68.750	Loxodonta_africana
ENSEEUG00000008077	SSB	76	55.184	ENSLAFG00000026721	-	98	55.184	Loxodonta_africana
ENSEEUG00000008077	SSB	78	74.510	ENSLAFG00000000867	-	73	74.510	Loxodonta_africana
ENSEEUG00000008077	SSB	78	67.368	ENSMFAG00000041478	-	84	67.368	Macaca_fascicularis
ENSEEUG00000008077	SSB	86	89.286	ENSMFAG00000039066	SSB	85	97.391	Macaca_fascicularis
ENSEEUG00000008077	SSB	86	89.286	ENSMMUG00000023051	SSB	85	97.391	Macaca_mulatta
ENSEEUG00000008077	SSB	86	82.143	ENSMMUG00000039889	-	78	82.143	Macaca_mulatta
ENSEEUG00000008077	SSB	78	64.238	ENSMMUG00000011724	-	73	64.238	Macaca_mulatta
ENSEEUG00000008077	SSB	78	67.368	ENSMNEG00000034698	-	84	67.368	Macaca_nemestrina
ENSEEUG00000008077	SSB	86	89.286	ENSMNEG00000028321	SSB	85	97.391	Macaca_nemestrina
ENSEEUG00000008077	SSB	86	89.286	ENSMLEG00000035717	SSB	88	97.391	Mandrillus_leucophaeus
ENSEEUG00000008077	SSB	78	54.874	ENSMLEG00000042644	-	73	54.874	Mandrillus_leucophaeus
ENSEEUG00000008077	SSB	78	50.974	ENSMAMG00000004800	ssb	77	50.974	Mastacembelus_armatus
ENSEEUG00000008077	SSB	78	48.525	ENSMZEG00005005749	ssb	80	48.525	Maylandia_zebra
ENSEEUG00000008077	SSB	78	62.418	ENSMGAG00000010328	SSB	99	76.585	Meleagris_gallopavo
ENSEEUG00000008077	SSB	86	84.615	ENSMICG00000028252	-	82	84.615	Microcebus_murinus
ENSEEUG00000008077	SSB	99	59.744	ENSMICG00000033304	-	98	59.744	Microcebus_murinus
ENSEEUG00000008077	SSB	78	60.072	ENSMODG00000019271	-	71	60.072	Monodelphis_domestica
ENSEEUG00000008077	SSB	78	57.554	ENSMODG00000007027	-	71	57.554	Monodelphis_domestica
ENSEEUG00000008077	SSB	78	69.333	ENSMODG00000008227	-	74	69.667	Monodelphis_domestica
ENSEEUG00000008077	SSB	78	52.921	ENSMALG00000008045	ssb	72	52.921	Monopterus_albus
ENSEEUG00000008077	SSB	78	70.820	MGP_CAROLIEiJ_G0023629	-	100	90.217	Mus_caroli
ENSEEUG00000008077	SSB	78	70.164	ENSMUSG00000068882	Ssb	100	90.217	Mus_musculus
ENSEEUG00000008077	SSB	78	70.164	MGP_PahariEiJ_G0025081	-	100	90.217	Mus_pahari
ENSEEUG00000008077	SSB	78	70.164	MGP_SPRETEiJ_G0024551	Ssb	100	90.217	Mus_spretus
ENSEEUG00000008077	SSB	86	82.143	ENSMPUG00000000785	SSB	82	82.143	Mustela_putorius_furo
ENSEEUG00000008077	SSB	86	89.286	ENSMLUG00000016316	SSB	80	89.286	Myotis_lucifugus
ENSEEUG00000008077	SSB	78	48.525	ENSNBRG00000012661	ssb	80	48.525	Neolamprologus_brichardi
ENSEEUG00000008077	SSB	78	62.976	ENSNLEG00000028754	-	72	62.976	Nomascus_leucogenys
ENSEEUG00000008077	SSB	86	89.286	ENSNLEG00000004958	SSB	86	97.391	Nomascus_leucogenys
ENSEEUG00000008077	SSB	63	71.660	ENSMEUG00000001650	-	99	71.660	Notamacropus_eugenii
ENSEEUG00000008077	SSB	92	65.070	ENSODEG00000004202	-	100	65.070	Octodon_degus
ENSEEUG00000008077	SSB	54	96.216	ENSODEG00000010185	-	100	96.216	Octodon_degus
ENSEEUG00000008077	SSB	78	48.701	ENSONIG00000008776	ssb	77	48.701	Oreochromis_niloticus
ENSEEUG00000008077	SSB	78	69.608	ENSOANG00000008543	SSB	76	69.935	Ornithorhynchus_anatinus
ENSEEUG00000008077	SSB	86	89.286	ENSOCUG00000010396	SSB	82	89.286	Oryctolagus_cuniculus
ENSEEUG00000008077	SSB	78	50.000	ENSORLG00000017208	ssb	76	50.000	Oryzias_latipes
ENSEEUG00000008077	SSB	78	52.577	ENSORLG00020022574	ssb	76	49.675	Oryzias_latipes_hni
ENSEEUG00000008077	SSB	78	49.675	ENSORLG00015016592	ssb	76	49.675	Oryzias_latipes_hsok
ENSEEUG00000008077	SSB	77	49.013	ENSOMEG00000003193	ssb	76	49.351	Oryzias_melastigma
ENSEEUG00000008077	SSB	86	78.571	ENSOGAG00000029768	SSB	79	78.571	Otolemur_garnettii
ENSEEUG00000008077	SSB	86	81.481	ENSOARG00000002906	SSB	82	81.481	Ovis_aries
ENSEEUG00000008077	SSB	86	89.286	ENSPPAG00000042673	SSB	86	97.391	Pan_paniscus
ENSEEUG00000008077	SSB	78	57.843	ENSPPAG00000032427	-	100	86.047	Pan_paniscus
ENSEEUG00000008077	SSB	87	54.706	ENSPPAG00000006189	-	93	54.706	Pan_paniscus
ENSEEUG00000008077	SSB	78	75.490	ENSPPRG00000006599	SSB	75	75.490	Panthera_pardus
ENSEEUG00000008077	SSB	78	75.163	ENSPTIG00000011021	SSB	73	75.163	Panthera_tigris_altaica
ENSEEUG00000008077	SSB	86	89.286	ENSPTRG00000012620	SSB	86	97.391	Pan_troglodytes
ENSEEUG00000008077	SSB	78	60.690	ENSPTRG00000042880	-	72	60.690	Pan_troglodytes
ENSEEUG00000008077	SSB	78	55.596	ENSPANG00000031877	-	71	55.596	Papio_anubis
ENSEEUG00000008077	SSB	86	89.286	ENSPANG00000007440	SSB	85	97.391	Papio_anubis
ENSEEUG00000008077	SSB	86	82.143	ENSPANG00000034126	-	80	82.143	Papio_anubis
ENSEEUG00000008077	SSB	77	50.825	ENSPKIG00000019325	ssb	80	51.645	Paramormyrops_kingsleyae
ENSEEUG00000008077	SSB	78	59.477	ENSPSIG00000002265	SSB	70	62.092	Pelodiscus_sinensis
ENSEEUG00000008077	SSB	67	44.485	ENSPMGG00000020075	ssb	72	44.364	Periophthalmus_magnuspinnatus
ENSEEUG00000008077	SSB	78	41.254	ENSPMAG00000002982	ssb	71	41.254	Petromyzon_marinus
ENSEEUG00000008077	SSB	78	68.627	ENSPCIG00000028591	-	76	68.627	Phascolarctos_cinereus
ENSEEUG00000008077	SSB	78	47.403	ENSPFOG00000009650	ssb	76	47.403	Poecilia_formosa
ENSEEUG00000008077	SSB	78	47.403	ENSPLAG00000020498	ssb	76	47.403	Poecilia_latipinna
ENSEEUG00000008077	SSB	78	47.403	ENSPMEG00000001051	ssb	76	47.403	Poecilia_mexicana
ENSEEUG00000008077	SSB	78	46.753	ENSPREG00000003708	ssb	80	46.753	Poecilia_reticulata
ENSEEUG00000008077	SSB	86	89.286	ENSPPYG00000012919	SSB	82	89.286	Pongo_abelii
ENSEEUG00000008077	SSB	79	81.481	ENSPCAG00000010276	SSB	81	81.481	Procavia_capensis
ENSEEUG00000008077	SSB	86	89.286	ENSPCOG00000015741	-	92	90.517	Propithecus_coquereli
ENSEEUG00000008077	SSB	86	89.286	ENSPCOG00000023189	-	81	89.286	Propithecus_coquereli
ENSEEUG00000008077	SSB	72	75.352	ENSPVAG00000006615	SSB	81	75.352	Pteropus_vampyrus
ENSEEUG00000008077	SSB	78	48.525	ENSPNYG00000006444	ssb	80	48.525	Pundamilia_nyererei
ENSEEUG00000008077	SSB	77	46.535	ENSPNAG00000011708	ssb	75	46.580	Pygocentrus_nattereri
ENSEEUG00000008077	SSB	78	69.836	ENSRNOG00000011606	AABR07061825.1	76	69.836	Rattus_norvegicus
ENSEEUG00000008077	SSB	78	71.475	ENSRNOG00000007998	Ssb	73	71.475	Rattus_norvegicus
ENSEEUG00000008077	SSB	86	82.143	ENSRBIG00000029918	-	78	82.143	Rhinopithecus_bieti
ENSEEUG00000008077	SSB	87	60.000	ENSRBIG00000041608	-	98	60.000	Rhinopithecus_bieti
ENSEEUG00000008077	SSB	70	59.286	ENSRBIG00000041232	-	88	82.014	Rhinopithecus_bieti
ENSEEUG00000008077	SSB	86	89.286	ENSRBIG00000041972	SSB	88	97.391	Rhinopithecus_bieti
ENSEEUG00000008077	SSB	86	82.143	ENSRROG00000007149	-	80	82.143	Rhinopithecus_roxellana
ENSEEUG00000008077	SSB	75	61.279	ENSRROG00000031684	-	86	85.616	Rhinopithecus_roxellana
ENSEEUG00000008077	SSB	73	85.714	ENSRROG00000034102	-	80	85.714	Rhinopithecus_roxellana
ENSEEUG00000008077	SSB	86	89.286	ENSRROG00000040346	SSB	85	97.391	Rhinopithecus_roxellana
ENSEEUG00000008077	SSB	86	85.714	ENSSBOG00000027204	SSB	86	97.391	Saimiri_boliviensis_boliviensis
ENSEEUG00000008077	SSB	78	68.301	ENSSHAG00000018062	SSB	75	68.301	Sarcophilus_harrisii
ENSEEUG00000008077	SSB	77	51.815	ENSSFOG00015000550	ssb	75	53.268	Scleropages_formosus
ENSEEUG00000008077	SSB	77	50.174	ENSSMAG00000013885	ssb	82	47.727	Scophthalmus_maximus
ENSEEUG00000008077	SSB	78	49.026	ENSSDUG00000020117	ssb	77	49.026	Seriola_dumerili
ENSEEUG00000008077	SSB	78	51.203	ENSSLDG00000002525	ssb	76	51.203	Seriola_lalandi_dorsalis
ENSEEUG00000008077	SSB	80	89.286	ENSSARG00000007747	SSB	82	89.286	Sorex_araneus
ENSEEUG00000008077	SSB	78	63.725	ENSSPUG00000012112	SSB	75	63.725	Sphenodon_punctatus
ENSEEUG00000008077	SSB	77	48.355	ENSSPAG00000005696	ssb	79	48.701	Stegastes_partitus
ENSEEUG00000008077	SSB	78	70.164	ENSSSCG00000015938	SSB	76	70.164	Sus_scrofa
ENSEEUG00000008077	SSB	78	61.438	ENSTGUG00000007942	SSB	75	61.438	Taeniopygia_guttata
ENSEEUG00000008077	SSB	78	49.351	ENSTRUG00000017839	ssb	77	49.351	Takifugu_rubripes
ENSEEUG00000008077	SSB	78	50.325	ENSTNIG00000000915	ssb	86	50.325	Tetraodon_nigroviridis
ENSEEUG00000008077	SSB	58	97.391	ENSTBEG00000009056	SSB	57	97.391	Tupaia_belangeri
ENSEEUG00000008077	SSB	86	82.759	ENSTTRG00000002152	SSB	82	82.759	Tursiops_truncatus
ENSEEUG00000008077	SSB	78	75.817	ENSUAMG00000027833	SSB	81	75.817	Ursus_americanus
ENSEEUG00000008077	SSB	78	75.817	ENSUMAG00000013907	SSB	75	75.817	Ursus_maritimus
ENSEEUG00000008077	SSB	78	76.471	ENSVPAG00000007183	SSB	76	76.471	Vicugna_pacos
ENSEEUG00000008077	SSB	78	75.490	ENSVVUG00000016573	SSB	59	75.490	Vulpes_vulpes
ENSEEUG00000008077	SSB	78	53.268	ENSXETG00000025402	ssb	72	53.268	Xenopus_tropicalis
ENSEEUG00000008077	SSB	78	47.351	ENSXCOG00000019109	ssb	93	60.938	Xiphophorus_couchianus
ENSEEUG00000008077	SSB	78	46.753	ENSXMAG00000004888	ssb	76	46.753	Xiphophorus_maculatus