EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000008203 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 603 bases
Position: chrscaffold_322752:9400-10002
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000007442	RRM_5	PF13893.6	2.1e-06	1	1
ENSEEUP00000007442	RRM_1	PF00076.22	2.5e-43	1	2
ENSEEUP00000007442	RRM_1	PF00076.22	2.5e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000008167	-	603	-	ENSEEUP00000007442	200 (aa)	-	UPI0000F61396

Gene Model

Click here to download ENSEEUG00000008203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000008203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000008203	-	99	68.528	ENSEEUG00000005978	PABPC1L	60	68.528
ENSEEUG00000008203	-	98	68.345	ENSEEUG00000002701	PABPC1	54	68.345
ENSEEUG00000008203	-	79	30.857	ENSEEUG00000011861	TIAL1	76	30.857
ENSEEUG00000008203	-	99	71.574	ENSEEUG00000002962	PABPC4	56	71.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000008203	-	100	94.500	ENSG00000186288	PABPC1L2A	100	94.500	Homo_sapiens
ENSEEUG00000008203	-	100	94.500	ENSG00000184388	PABPC1L2B	100	94.500	Homo_sapiens
ENSEEUG00000008203	-	98	75.000	ENSAPOG00000017776	pabpc1b	61	75.000	Acanthochromis_polyacanthus
ENSEEUG00000008203	-	98	76.020	ENSAPOG00000015105	pabpc1a	59	76.020	Acanthochromis_polyacanthus
ENSEEUG00000008203	-	100	95.000	ENSAMEG00000019441	-	100	95.000	Ailuropoda_melanoleuca
ENSEEUG00000008203	-	98	76.020	ENSACIG00000004685	pabpc1a	59	76.020	Amphilophus_citrinellus
ENSEEUG00000008203	-	98	73.980	ENSACIG00000018366	pabpc1b	60	73.980	Amphilophus_citrinellus
ENSEEUG00000008203	-	98	76.020	ENSAOCG00000011656	pabpc1a	59	76.020	Amphiprion_ocellaris
ENSEEUG00000008203	-	98	75.510	ENSAOCG00000019839	pabpc1b	59	75.510	Amphiprion_ocellaris
ENSEEUG00000008203	-	98	76.020	ENSAPEG00000006963	pabpc1a	59	76.020	Amphiprion_percula
ENSEEUG00000008203	-	98	75.510	ENSAPEG00000010435	pabpc1b	59	75.510	Amphiprion_percula
ENSEEUG00000008203	-	98	74.490	ENSATEG00000012917	pabpc1b	59	74.490	Anabas_testudineus
ENSEEUG00000008203	-	98	76.020	ENSATEG00000024852	pabpc1a	59	76.020	Anabas_testudineus
ENSEEUG00000008203	-	100	94.500	ENSANAG00000019429	-	100	94.500	Aotus_nancymaae
ENSEEUG00000008203	-	100	94.500	ENSANAG00000019431	-	100	94.500	Aotus_nancymaae
ENSEEUG00000008203	-	98	73.469	ENSACLG00000014335	pabpc1b	59	73.469	Astatotilapia_calliptera
ENSEEUG00000008203	-	98	76.020	ENSACLG00000009399	pabpc1a	68	75.000	Astatotilapia_calliptera
ENSEEUG00000008203	-	98	75.000	ENSAMXG00000008599	pabpc1b	59	75.000	Astyanax_mexicanus
ENSEEUG00000008203	-	100	94.500	ENSBTAG00000052491	-	94	94.500	Bos_taurus
ENSEEUG00000008203	-	100	94.000	ENSBTAG00000050902	-	95	94.000	Bos_taurus
ENSEEUG00000008203	-	100	94.500	ENSCJAG00000041326	-	100	94.500	Callithrix_jacchus
ENSEEUG00000008203	-	100	95.000	ENSCAFG00020002052	-	96	95.000	Canis_lupus_dingo
ENSEEUG00000008203	-	100	95.000	ENSCHIG00000011138	-	100	95.000	Capra_hircus
ENSEEUG00000008203	-	100	94.500	ENSCHIG00000006283	-	100	94.500	Capra_hircus
ENSEEUG00000008203	-	100	95.000	ENSTSYG00000001775	-	100	95.000	Carlito_syrichta
ENSEEUG00000008203	-	100	94.500	ENSCPOG00000009525	-	100	94.500	Cavia_porcellus
ENSEEUG00000008203	-	100	94.500	ENSCCAG00000031524	-	100	94.500	Cebus_capucinus
ENSEEUG00000008203	-	100	94.500	ENSCATG00000042826	-	100	94.500	Cercocebus_atys
ENSEEUG00000008203	-	100	94.500	ENSCATG00000043125	-	100	94.500	Cercocebus_atys
ENSEEUG00000008203	-	100	91.500	ENSCLAG00000017412	-	100	91.500	Chinchilla_lanigera
ENSEEUG00000008203	-	100	91.500	ENSCLAG00000017409	-	100	91.500	Chinchilla_lanigera
ENSEEUG00000008203	-	100	94.500	ENSCSAG00000000102	-	100	94.500	Chlorocebus_sabaeus
ENSEEUG00000008203	-	99	89.899	ENSCGRG00001023387	-	98	89.447	Cricetulus_griseus_chok1gshd
ENSEEUG00000008203	-	98	76.020	ENSCSEG00000013324	pabpc1a	59	76.020	Cynoglossus_semilaevis
ENSEEUG00000008203	-	98	75.000	ENSCSEG00000015241	-	59	75.000	Cynoglossus_semilaevis
ENSEEUG00000008203	-	98	76.020	ENSCVAG00000021872	pabpc1a	59	76.020	Cyprinodon_variegatus
ENSEEUG00000008203	-	98	75.000	ENSCVAG00000005489	pabpc1b	59	75.000	Cyprinodon_variegatus
ENSEEUG00000008203	-	98	76.020	ENSDARG00000017219	pabpc1a	59	76.020	Danio_rerio
ENSEEUG00000008203	-	98	74.490	ENSDARG00000021140	pabpc1b	92	81.967	Danio_rerio
ENSEEUG00000008203	-	100	93.500	ENSDNOG00000030926	-	100	93.500	Dasypus_novemcinctus
ENSEEUG00000008203	-	100	93.000	ENSDORG00000011362	-	100	93.000	Dipodomys_ordii
ENSEEUG00000008203	-	100	94.500	ENSEASG00005010399	-	95	94.500	Equus_asinus_asinus
ENSEEUG00000008203	-	100	94.500	ENSECAG00000002620	-	95	94.500	Equus_caballus
ENSEEUG00000008203	-	98	75.000	ENSELUG00000015062	-	59	75.000	Esox_lucius
ENSEEUG00000008203	-	93	52.941	ENSELUG00000005389	-	78	52.941	Esox_lucius
ENSEEUG00000008203	-	98	75.000	ENSELUG00000003614	pabpc1a	60	75.000	Esox_lucius
ENSEEUG00000008203	-	100	95.000	ENSFCAG00000039701	-	100	95.000	Felis_catus
ENSEEUG00000008203	-	100	94.500	ENSFDAG00000005484	-	100	94.500	Fukomys_damarensis
ENSEEUG00000008203	-	98	76.020	ENSFHEG00000018979	pabpc1a	59	76.020	Fundulus_heteroclitus
ENSEEUG00000008203	-	98	75.000	ENSFHEG00000008186	pabpc1b	59	75.000	Fundulus_heteroclitus
ENSEEUG00000008203	-	98	75.000	ENSGMOG00000002448	-	59	75.000	Gadus_morhua
ENSEEUG00000008203	-	98	75.510	ENSGMOG00000013448	pabpc1a	58	75.510	Gadus_morhua
ENSEEUG00000008203	-	98	76.020	ENSGAFG00000019750	pabpc1a	62	76.020	Gambusia_affinis
ENSEEUG00000008203	-	98	75.000	ENSGAFG00000010193	pabpc1b	62	75.000	Gambusia_affinis
ENSEEUG00000008203	-	98	76.020	ENSGACG00000003572	pabpc1a	59	76.020	Gasterosteus_aculeatus
ENSEEUG00000008203	-	98	76.020	ENSGACG00000003771	pabpc1b	65	76.020	Gasterosteus_aculeatus
ENSEEUG00000008203	-	100	94.500	ENSGGOG00000038606	-	100	94.500	Gorilla_gorilla
ENSEEUG00000008203	-	100	94.500	ENSGGOG00000043933	-	100	94.500	Gorilla_gorilla
ENSEEUG00000008203	-	98	76.020	ENSHBUG00000020487	pabpc1a	68	75.000	Haplochromis_burtoni
ENSEEUG00000008203	-	98	73.469	ENSHBUG00000002075	pabpc1b	61	73.469	Haplochromis_burtoni
ENSEEUG00000008203	-	100	93.500	ENSHGLG00000019668	-	100	93.500	Heterocephalus_glaber_female
ENSEEUG00000008203	-	100	93.500	ENSHGLG00000019762	-	100	93.500	Heterocephalus_glaber_female
ENSEEUG00000008203	-	100	93.500	ENSHGLG00100020854	-	100	93.500	Heterocephalus_glaber_male
ENSEEUG00000008203	-	95	65.608	ENSHCOG00000003175	pabpc1b	69	64.500	Hippocampus_comes
ENSEEUG00000008203	-	98	76.020	ENSHCOG00000013502	pabpc1a	59	76.020	Hippocampus_comes
ENSEEUG00000008203	-	98	76.020	ENSIPUG00000008848	pabpc1a	60	76.020	Ictalurus_punctatus
ENSEEUG00000008203	-	98	58.247	ENSIPUG00000021244	-	52	57.653	Ictalurus_punctatus
ENSEEUG00000008203	-	98	75.000	ENSIPUG00000010791	-	63	75.000	Ictalurus_punctatus
ENSEEUG00000008203	-	100	94.000	ENSSTOG00000026028	-	100	94.000	Ictidomys_tridecemlineatus
ENSEEUG00000008203	-	100	94.000	ENSSTOG00000022096	-	100	94.000	Ictidomys_tridecemlineatus
ENSEEUG00000008203	-	100	92.500	ENSJJAG00000007037	-	100	92.500	Jaculus_jaculus
ENSEEUG00000008203	-	98	74.490	ENSKMAG00000008049	pabpc1b	64	74.490	Kryptolebias_marmoratus
ENSEEUG00000008203	-	98	76.020	ENSKMAG00000000605	pabpc1a	59	76.020	Kryptolebias_marmoratus
ENSEEUG00000008203	-	98	76.020	ENSLBEG00000024002	-	59	76.020	Labrus_bergylta
ENSEEUG00000008203	-	98	75.510	ENSLBEG00000026845	pabpc1b	59	75.510	Labrus_bergylta
ENSEEUG00000008203	-	99	93.970	ENSLAFG00000023096	-	99	93.970	Loxodonta_africana
ENSEEUG00000008203	-	100	94.030	ENSMFAG00000028878	-	100	94.030	Macaca_fascicularis
ENSEEUG00000008203	-	100	94.500	ENSMMUG00000039929	-	100	94.500	Macaca_mulatta
ENSEEUG00000008203	-	100	94.500	ENSMMUG00000037681	-	100	94.500	Macaca_mulatta
ENSEEUG00000008203	-	100	94.500	ENSMMUG00000009740	-	100	94.500	Macaca_mulatta
ENSEEUG00000008203	-	100	94.500	ENSMNEG00000037732	-	100	94.500	Macaca_nemestrina
ENSEEUG00000008203	-	100	94.500	ENSMLEG00000027495	-	100	94.500	Mandrillus_leucophaeus
ENSEEUG00000008203	-	98	74.490	ENSMAMG00000014610	pabpc1b	60	74.490	Mastacembelus_armatus
ENSEEUG00000008203	-	98	76.020	ENSMAMG00000004502	-	68	75.000	Mastacembelus_armatus
ENSEEUG00000008203	-	98	73.469	ENSMZEG00005026745	pabpc1b	59	73.469	Maylandia_zebra
ENSEEUG00000008203	-	98	76.020	ENSMZEG00005025416	pabpc1a	68	75.000	Maylandia_zebra
ENSEEUG00000008203	-	100	94.500	ENSMICG00000047642	-	100	94.500	Microcebus_murinus
ENSEEUG00000008203	-	98	76.020	ENSMMOG00000018044	pabpc1a	68	75.000	Mola_mola
ENSEEUG00000008203	-	98	75.510	ENSMMOG00000018009	pabpc1b	63	75.510	Mola_mola
ENSEEUG00000008203	-	98	70.408	ENSMODG00000013156	-	58	70.408	Monodelphis_domestica
ENSEEUG00000008203	-	98	66.154	ENSMODG00000015024	-	57	66.154	Monodelphis_domestica
ENSEEUG00000008203	-	98	74.490	ENSMALG00000006066	pabpc1b	64	74.490	Monopterus_albus
ENSEEUG00000008203	-	98	76.020	ENSMALG00000013020	-	64	76.020	Monopterus_albus
ENSEEUG00000008203	-	100	92.000	ENSNGAG00000012688	-	100	92.000	Nannospalax_galili
ENSEEUG00000008203	-	98	76.020	ENSNBRG00000003068	-	68	75.000	Neolamprologus_brichardi
ENSEEUG00000008203	-	98	73.469	ENSNBRG00000013737	pabpc1b	63	73.469	Neolamprologus_brichardi
ENSEEUG00000008203	-	100	94.500	ENSNLEG00000018128	-	100	94.500	Nomascus_leucogenys
ENSEEUG00000008203	-	100	92.000	ENSODEG00000018540	-	100	92.000	Octodon_degus
ENSEEUG00000008203	-	98	73.469	ENSONIG00000002717	pabpc1b	59	73.469	Oreochromis_niloticus
ENSEEUG00000008203	-	98	76.020	ENSONIG00000006871	-	59	76.020	Oreochromis_niloticus
ENSEEUG00000008203	-	100	95.000	ENSOCUG00000002565	-	100	95.000	Oryctolagus_cuniculus
ENSEEUG00000008203	-	98	76.020	ENSORLG00000002691	pabpc1a	68	75.000	Oryzias_latipes
ENSEEUG00000008203	-	98	73.469	ENSORLG00000003008	-	58	73.469	Oryzias_latipes
ENSEEUG00000008203	-	98	73.469	ENSORLG00020022259	-	59	73.469	Oryzias_latipes_hni
ENSEEUG00000008203	-	98	76.020	ENSORLG00020022398	pabpc1a	59	76.020	Oryzias_latipes_hni
ENSEEUG00000008203	-	98	73.469	ENSORLG00015010932	-	59	73.469	Oryzias_latipes_hsok
ENSEEUG00000008203	-	98	76.020	ENSORLG00015013633	pabpc1	59	76.020	Oryzias_latipes_hsok
ENSEEUG00000008203	-	98	76.020	ENSOMEG00000020219	pabpc1a	59	76.020	Oryzias_melastigma
ENSEEUG00000008203	-	98	72.222	ENSOMEG00000013627	pabpc1b	67	72.222	Oryzias_melastigma
ENSEEUG00000008203	-	100	94.500	ENSOGAG00000026047	-	100	94.500	Otolemur_garnettii
ENSEEUG00000008203	-	100	94.500	ENSOGAG00000029513	-	100	94.500	Otolemur_garnettii
ENSEEUG00000008203	-	100	94.500	ENSOARG00000005943	-	100	94.500	Ovis_aries
ENSEEUG00000008203	-	100	94.500	ENSPPAG00000012920	-	100	94.500	Pan_paniscus
ENSEEUG00000008203	-	100	95.000	ENSPPRG00000011804	-	100	95.000	Panthera_pardus
ENSEEUG00000008203	-	100	95.000	ENSPPRG00000011809	-	100	95.000	Panthera_pardus
ENSEEUG00000008203	-	100	94.500	ENSPTRG00000028252	-	100	94.500	Pan_troglodytes
ENSEEUG00000008203	-	100	94.500	ENSPANG00000011549	-	100	94.500	Papio_anubis
ENSEEUG00000008203	-	98	75.000	ENSPKIG00000005676	pabpc1b	59	75.000	Paramormyrops_kingsleyae
ENSEEUG00000008203	-	98	75.510	ENSPMGG00000023134	-	81	75.510	Periophthalmus_magnuspinnatus
ENSEEUG00000008203	-	98	75.000	ENSPMGG00000022487	pabpc1a	77	75.000	Periophthalmus_magnuspinnatus
ENSEEUG00000008203	-	98	76.020	ENSPFOG00000010815	pabpc1a	58	76.020	Poecilia_formosa
ENSEEUG00000008203	-	98	74.490	ENSPFOG00000005917	pabpc1b	59	74.490	Poecilia_formosa
ENSEEUG00000008203	-	98	75.000	ENSPLAG00000001388	pabpc1b	59	75.000	Poecilia_latipinna
ENSEEUG00000008203	-	98	76.020	ENSPLAG00000004114	pabpc1a	59	76.020	Poecilia_latipinna
ENSEEUG00000008203	-	98	76.020	ENSPMEG00000001334	pabpc1a	59	76.020	Poecilia_mexicana
ENSEEUG00000008203	-	98	74.490	ENSPMEG00000014399	pabpc1b	62	71.939	Poecilia_mexicana
ENSEEUG00000008203	-	98	76.020	ENSPREG00000019595	pabpc1a	92	81.967	Poecilia_reticulata
ENSEEUG00000008203	-	98	75.000	ENSPREG00000010911	pabpc1b	62	75.000	Poecilia_reticulata
ENSEEUG00000008203	-	100	94.500	ENSPPYG00000020468	-	100	94.500	Pongo_abelii
ENSEEUG00000008203	-	100	94.000	ENSPCAG00000005308	-	100	94.000	Procavia_capensis
ENSEEUG00000008203	-	100	94.000	ENSPCOG00000026349	-	100	94.000	Propithecus_coquereli
ENSEEUG00000008203	-	100	91.500	ENSPVAG00000016117	-	100	91.500	Pteropus_vampyrus
ENSEEUG00000008203	-	98	73.469	ENSPNYG00000012578	pabpc1b	61	73.469	Pundamilia_nyererei
ENSEEUG00000008203	-	98	76.020	ENSPNYG00000005192	pabpc1a	61	75.000	Pundamilia_nyererei
ENSEEUG00000008203	-	98	75.510	ENSPNAG00000024626	pabpc1b	58	75.510	Pygocentrus_nattereri
ENSEEUG00000008203	-	98	75.000	ENSPNAG00000028408	pabpc1a	65	75.000	Pygocentrus_nattereri
ENSEEUG00000008203	-	99	74.112	ENSRBIG00000028738	-	69	74.112	Rhinopithecus_bieti
ENSEEUG00000008203	-	100	94.500	ENSRBIG00000027173	-	100	94.500	Rhinopithecus_bieti
ENSEEUG00000008203	-	100	94.500	ENSRROG00000017404	-	100	94.500	Rhinopithecus_roxellana
ENSEEUG00000008203	-	98	69.898	ENSSHAG00000000511	-	59	69.898	Sarcophilus_harrisii
ENSEEUG00000008203	-	98	75.510	ENSSFOG00015002752	-	59	75.510	Scleropages_formosus
ENSEEUG00000008203	-	98	75.510	ENSSFOG00015006662	pabpc1a	59	75.510	Scleropages_formosus
ENSEEUG00000008203	-	87	67.241	ENSSFOG00015019668	-	67	67.241	Scleropages_formosus
ENSEEUG00000008203	-	98	74.490	ENSSMAG00000006869	pabpc1b	59	74.490	Scophthalmus_maximus
ENSEEUG00000008203	-	98	76.020	ENSSMAG00000010803	pabpc1a	60	76.020	Scophthalmus_maximus
ENSEEUG00000008203	-	98	76.020	ENSSDUG00000006675	pabpc1a	59	76.020	Seriola_dumerili
ENSEEUG00000008203	-	98	75.000	ENSSDUG00000011965	pabpc1b	59	75.000	Seriola_dumerili
ENSEEUG00000008203	-	98	75.000	ENSSLDG00000014156	pabpc1b	60	75.000	Seriola_lalandi_dorsalis
ENSEEUG00000008203	-	98	76.020	ENSSLDG00000011661	pabpc1a	59	76.020	Seriola_lalandi_dorsalis
ENSEEUG00000008203	-	98	75.000	ENSSPAG00000019265	pabpc1b	65	75.000	Stegastes_partitus
ENSEEUG00000008203	-	98	76.020	ENSSPAG00000014453	-	59	76.020	Stegastes_partitus
ENSEEUG00000008203	-	100	95.000	ENSSSCG00000032167	-	100	95.000	Sus_scrofa
ENSEEUG00000008203	-	100	95.000	ENSSSCG00000036336	-	100	95.000	Sus_scrofa
ENSEEUG00000008203	-	98	76.020	ENSTRUG00000011577	-	59	76.020	Takifugu_rubripes
ENSEEUG00000008203	-	98	75.510	ENSTRUG00000003767	-	60	75.510	Takifugu_rubripes
ENSEEUG00000008203	-	98	76.020	ENSTNIG00000009153	pabpc1b	59	76.020	Tetraodon_nigroviridis
ENSEEUG00000008203	-	98	71.782	ENSTNIG00000013307	pabpc1a	58	71.782	Tetraodon_nigroviridis
ENSEEUG00000008203	-	100	95.000	ENSTTRG00000013181	-	100	95.000	Tursiops_truncatus
ENSEEUG00000008203	-	100	95.000	ENSUAMG00000008089	-	100	95.000	Ursus_americanus
ENSEEUG00000008203	-	99	56.345	ENSUMAG00000023926	-	88	56.345	Ursus_maritimus
ENSEEUG00000008203	-	100	95.000	ENSUMAG00000003364	-	100	95.000	Ursus_maritimus
ENSEEUG00000008203	-	100	94.500	ENSVVUG00000015892	-	97	94.500	Vulpes_vulpes
ENSEEUG00000008203	-	98	75.000	ENSXCOG00000019901	pabpc1b	62	75.000	Xiphophorus_couchianus
ENSEEUG00000008203	-	98	76.020	ENSXCOG00000017066	pabpc1a	63	76.020	Xiphophorus_couchianus
ENSEEUG00000008203	-	98	76.020	ENSXMAG00000002555	pabpc1a	62	76.020	Xiphophorus_maculatus
ENSEEUG00000008203	-	98	75.000	ENSXMAG00000003753	pabpc1b	89	75.000	Xiphophorus_maculatus