EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000008467 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 97271 bases
Position: chrGeneScaffold_7677:3-97273
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000007723	tRNA_int_end_N2	PF12928.7	4.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000008478	TSEN54-201	1371	-	ENSEEUP00000007723	456 (aa)	-	UPI0000F633FD

Gene Model

Click here to download ENSEEUG00000008467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000008467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000008467	TSEN54	100	79.431	ENSG00000182173	TSEN54	100	93.056	Homo_sapiens
ENSEEUG00000008467	TSEN54	99	44.760	ENSAPOG00000009659	tsen54	77	65.882	Acanthochromis_polyacanthus
ENSEEUG00000008467	TSEN54	100	82.932	ENSAMEG00000009414	TSEN54	86	82.932	Ailuropoda_melanoleuca
ENSEEUG00000008467	TSEN54	99	44.783	ENSAOCG00000000152	tsen54	84	43.441	Amphiprion_ocellaris
ENSEEUG00000008467	TSEN54	99	43.886	ENSAPEG00000018931	tsen54	83	42.581	Amphiprion_percula
ENSEEUG00000008467	TSEN54	99	44.017	ENSATEG00000019860	tsen54	86	43.432	Anabas_testudineus
ENSEEUG00000008467	TSEN54	100	50.756	ENSAPLG00000009419	TSEN54	100	50.323	Anas_platyrhynchos
ENSEEUG00000008467	TSEN54	99	48.701	ENSACAG00000006714	TSEN54	86	47.346	Anolis_carolinensis
ENSEEUG00000008467	TSEN54	100	80.525	ENSANAG00000024061	TSEN54	85	80.525	Aotus_nancymaae
ENSEEUG00000008467	TSEN54	99	43.167	ENSACLG00000019800	tsen54	86	43.601	Astatotilapia_calliptera
ENSEEUG00000008467	TSEN54	99	43.573	ENSAMXG00000006546	tsen54	85	44.035	Astyanax_mexicanus
ENSEEUG00000008467	TSEN54	100	81.182	ENSBTAG00000000824	TSEN54	86	80.525	Bos_taurus
ENSEEUG00000008467	TSEN54	100	80.306	ENSCJAG00000014278	TSEN54	85	80.306	Callithrix_jacchus
ENSEEUG00000008467	TSEN54	100	83.589	ENSCAFG00000004798	TSEN54	86	83.589	Canis_familiaris
ENSEEUG00000008467	TSEN54	100	83.589	ENSCAFG00020000312	TSEN54	86	83.589	Canis_lupus_dingo
ENSEEUG00000008467	TSEN54	100	78.337	ENSCHIG00000019908	TSEN54	86	77.243	Capra_hircus
ENSEEUG00000008467	TSEN54	100	78.448	ENSTSYG00000037439	TSEN54	100	78.448	Carlito_syrichta
ENSEEUG00000008467	TSEN54	100	80.525	ENSCCAG00000036624	TSEN54	85	80.525	Cebus_capucinus
ENSEEUG00000008467	TSEN54	100	80.525	ENSCATG00000042877	TSEN54	85	80.525	Cercocebus_atys
ENSEEUG00000008467	TSEN54	100	77.024	ENSCLAG00000002924	TSEN54	86	76.805	Chinchilla_lanigera
ENSEEUG00000008467	TSEN54	100	80.088	ENSCSAG00000004809	TSEN54	86	80.088	Chlorocebus_sabaeus
ENSEEUG00000008467	TSEN54	99	53.978	ENSCPBG00000028071	TSEN54	87	53.548	Chrysemys_picta_bellii
ENSEEUG00000008467	TSEN54	100	79.650	ENSCANG00000028053	TSEN54	86	79.650	Colobus_angolensis_palliatus
ENSEEUG00000008467	TSEN54	100	73.742	ENSCGRG00001020029	Tsen54	86	73.304	Cricetulus_griseus_chok1gshd
ENSEEUG00000008467	TSEN54	98	73.214	ENSCGRG00000016289	Tsen54	100	72.768	Cricetulus_griseus_crigri
ENSEEUG00000008467	TSEN54	94	38.889	ENSCSEG00000020586	tsen54	99	37.963	Cynoglossus_semilaevis
ENSEEUG00000008467	TSEN54	94	43.619	ENSDARG00000036844	tsen54	99	41.763	Danio_rerio
ENSEEUG00000008467	TSEN54	100	79.650	ENSDNOG00000018452	TSEN54	86	79.650	Dasypus_novemcinctus
ENSEEUG00000008467	TSEN54	100	77.243	ENSDORG00000004073	Tsen54	86	76.805	Dipodomys_ordii
ENSEEUG00000008467	TSEN54	99	30.917	ENSEBUG00000005203	TSEN54	84	30.490	Eptatretus_burgeri
ENSEEUG00000008467	TSEN54	100	83.151	ENSEASG00005000579	TSEN54	86	82.713	Equus_asinus_asinus
ENSEEUG00000008467	TSEN54	100	82.932	ENSECAG00000004924	TSEN54	86	82.495	Equus_caballus
ENSEEUG00000008467	TSEN54	99	42.398	ENSELUG00000017703	tsen54	80	41.810	Esox_lucius
ENSEEUG00000008467	TSEN54	100	84.902	ENSFCAG00000023712	TSEN54	86	84.902	Felis_catus
ENSEEUG00000008467	TSEN54	99	47.957	ENSFALG00000001119	TSEN54	86	47.312	Ficedula_albicollis
ENSEEUG00000008467	TSEN54	100	78.775	ENSFDAG00000019090	TSEN54	99	78.337	Fukomys_damarensis
ENSEEUG00000008467	TSEN54	99	43.844	ENSFHEG00000005470	tsen54	85	43.844	Fundulus_heteroclitus
ENSEEUG00000008467	TSEN54	75	48.598	ENSGMOG00000013146	tsen54	84	48.544	Gadus_morhua
ENSEEUG00000008467	TSEN54	100	47.629	ENSGALG00000047163	TSEN54	89	45.494	Gallus_gallus
ENSEEUG00000008467	TSEN54	99	45.495	ENSGAFG00000005111	tsen54	85	45.238	Gambusia_affinis
ENSEEUG00000008467	TSEN54	99	42.735	ENSGACG00000014987	tsen54	88	40.851	Gasterosteus_aculeatus
ENSEEUG00000008467	TSEN54	100	53.518	ENSGAGG00000006825	TSEN54	86	53.305	Gopherus_agassizii
ENSEEUG00000008467	TSEN54	100	79.650	ENSGGOG00000009417	TSEN54	89	79.650	Gorilla_gorilla
ENSEEUG00000008467	TSEN54	89	41.205	ENSHBUG00000018296	tsen54	99	36.674	Haplochromis_burtoni
ENSEEUG00000008467	TSEN54	100	78.993	ENSHGLG00000007979	TSEN54	86	78.556	Heterocephalus_glaber_female
ENSEEUG00000008467	TSEN54	100	78.993	ENSHGLG00100005497	TSEN54	86	78.556	Heterocephalus_glaber_male
ENSEEUG00000008467	TSEN54	94	41.725	ENSHCOG00000007481	tsen54	99	41.435	Hippocampus_comes
ENSEEUG00000008467	TSEN54	71	73.196	ENSIPUG00000000590	tsen54	65	73.196	Ictalurus_punctatus
ENSEEUG00000008467	TSEN54	100	73.465	ENSSTOG00000012883	TSEN54	86	73.465	Ictidomys_tridecemlineatus
ENSEEUG00000008467	TSEN54	100	76.035	ENSJJAG00000007365	Tsen54	86	75.817	Jaculus_jaculus
ENSEEUG00000008467	TSEN54	99	44.060	ENSKMAG00000006944	tsen54	86	43.844	Kryptolebias_marmoratus
ENSEEUG00000008467	TSEN54	99	42.391	ENSLBEG00000004199	tsen54	86	41.991	Labrus_bergylta
ENSEEUG00000008467	TSEN54	99	42.553	ENSLACG00000009497	TSEN54	89	41.772	Latimeria_chalumnae
ENSEEUG00000008467	TSEN54	100	45.570	ENSLOCG00000011191	tsen54	86	45.781	Lepisosteus_oculatus
ENSEEUG00000008467	TSEN54	100	78.993	ENSLAFG00000011655	TSEN54	86	78.993	Loxodonta_africana
ENSEEUG00000008467	TSEN54	100	80.088	ENSMFAG00000000712	TSEN54	86	80.088	Macaca_fascicularis
ENSEEUG00000008467	TSEN54	100	79.869	ENSMNEG00000029199	TSEN54	86	79.869	Macaca_nemestrina
ENSEEUG00000008467	TSEN54	100	80.088	ENSMLEG00000044168	TSEN54	88	80.088	Mandrillus_leucophaeus
ENSEEUG00000008467	TSEN54	99	42.516	ENSMAMG00000019773	tsen54	86	42.489	Mastacembelus_armatus
ENSEEUG00000008467	TSEN54	99	43.167	ENSMZEG00005000884	tsen54	86	43.601	Maylandia_zebra
ENSEEUG00000008467	TSEN54	99	48.268	ENSMGAG00000009556	TSEN54	86	46.137	Meleagris_gallopavo
ENSEEUG00000008467	TSEN54	100	74.617	ENSMAUG00000016838	Tsen54	86	74.179	Mesocricetus_auratus
ENSEEUG00000008467	TSEN54	100	78.118	ENSMICG00000044012	TSEN54	85	78.118	Microcebus_murinus
ENSEEUG00000008467	TSEN54	100	74.836	ENSMOCG00000021585	Tsen54	86	74.398	Microtus_ochrogaster
ENSEEUG00000008467	TSEN54	73	66.000	ENSMMOG00000020189	tsen54	74	66.000	Mola_mola
ENSEEUG00000008467	TSEN54	100	66.667	ENSMODG00000007438	TSEN54	85	66.667	Monodelphis_domestica
ENSEEUG00000008467	TSEN54	99	42.766	ENSMALG00000020573	tsen54	86	42.340	Monopterus_albus
ENSEEUG00000008467	TSEN54	100	72.210	MGP_CAROLIEiJ_G0017417	Tsen54	86	71.772	Mus_caroli
ENSEEUG00000008467	TSEN54	100	72.210	ENSMUSG00000020781	Tsen54	86	71.772	Mus_musculus
ENSEEUG00000008467	TSEN54	100	71.991	MGP_PahariEiJ_G0018547	Tsen54	86	71.554	Mus_pahari
ENSEEUG00000008467	TSEN54	100	72.429	MGP_SPRETEiJ_G0018262	Tsen54	86	71.991	Mus_spretus
ENSEEUG00000008467	TSEN54	100	81.400	ENSMPUG00000013870	TSEN54	86	81.400	Mustela_putorius_furo
ENSEEUG00000008467	TSEN54	100	80.744	ENSMLUG00000015298	TSEN54	87	80.744	Myotis_lucifugus
ENSEEUG00000008467	TSEN54	100	75.492	ENSNGAG00000015673	Tsen54	86	75.055	Nannospalax_galili
ENSEEUG00000008467	TSEN54	100	62.882	ENSMEUG00000011908	TSEN54	97	62.882	Notamacropus_eugenii
ENSEEUG00000008467	TSEN54	100	69.803	ENSOPRG00000012513	TSEN54	85	69.803	Ochotona_princeps
ENSEEUG00000008467	TSEN54	99	43.469	ENSONIG00000009543	tsen54	86	42.827	Oreochromis_niloticus
ENSEEUG00000008467	TSEN54	100	71.053	ENSOCUG00000009875	TSEN54	84	71.053	Oryctolagus_cuniculus
ENSEEUG00000008467	TSEN54	99	42.451	ENSORLG00000000852	tsen54	85	40.693	Oryzias_latipes
ENSEEUG00000008467	TSEN54	99	43.326	ENSORLG00020018221	tsen54	95	42.670	Oryzias_latipes_hni
ENSEEUG00000008467	TSEN54	99	42.670	ENSORLG00015009413	tsen54	74	62.609	Oryzias_latipes_hsok
ENSEEUG00000008467	TSEN54	99	43.545	ENSOMEG00000014402	tsen54	83	42.888	Oryzias_melastigma
ENSEEUG00000008467	TSEN54	100	75.274	ENSOGAG00000001442	TSEN54	86	75.274	Otolemur_garnettii
ENSEEUG00000008467	TSEN54	100	78.556	ENSOARG00000010361	TSEN54	100	78.556	Ovis_aries
ENSEEUG00000008467	TSEN54	100	78.775	ENSPPAG00000043519	TSEN54	91	78.993	Pan_paniscus
ENSEEUG00000008467	TSEN54	100	85.120	ENSPPRG00000009162	TSEN54	86	85.120	Panthera_pardus
ENSEEUG00000008467	TSEN54	100	83.370	ENSPTIG00000019312	TSEN54	96	83.370	Panthera_tigris_altaica
ENSEEUG00000008467	TSEN54	100	79.431	ENSPTRG00000009646	TSEN54	86	79.431	Pan_troglodytes
ENSEEUG00000008467	TSEN54	100	80.306	ENSPANG00000020133	TSEN54	86	80.306	Papio_anubis
ENSEEUG00000008467	TSEN54	100	42.944	ENSPKIG00000023018	tsen54	100	43.080	Paramormyrops_kingsleyae
ENSEEUG00000008467	TSEN54	93	51.147	ENSPSIG00000012807	TSEN54	99	50.688	Pelodiscus_sinensis
ENSEEUG00000008467	TSEN54	99	32.972	ENSPMGG00000019578	tsen54	74	53.763	Periophthalmus_magnuspinnatus
ENSEEUG00000008467	TSEN54	100	75.055	ENSPEMG00000014857	Tsen54	86	74.617	Peromyscus_maniculatus_bairdii
ENSEEUG00000008467	TSEN54	99	46.022	ENSPFOG00000022740	tsen54	85	45.336	Poecilia_formosa
ENSEEUG00000008467	TSEN54	99	46.320	ENSPLAG00000014847	tsen54	85	45.415	Poecilia_latipinna
ENSEEUG00000008467	TSEN54	99	45.887	ENSPMEG00000022876	tsen54	85	45.197	Poecilia_mexicana
ENSEEUG00000008467	TSEN54	99	44.783	ENSPREG00000013090	tsen54	85	44.105	Poecilia_reticulata
ENSEEUG00000008467	TSEN54	100	72.429	ENSPPYG00000008629	TSEN54	94	73.523	Pongo_abelii
ENSEEUG00000008467	TSEN54	95	67.586	ENSPCAG00000002093	TSEN54	85	67.586	Procavia_capensis
ENSEEUG00000008467	TSEN54	100	80.963	ENSPCOG00000027880	TSEN54	86	80.963	Propithecus_coquereli
ENSEEUG00000008467	TSEN54	100	83.370	ENSPVAG00000008446	TSEN54	86	83.370	Pteropus_vampyrus
ENSEEUG00000008467	TSEN54	99	42.827	ENSPNYG00000010217	tsen54	99	39.773	Pundamilia_nyererei
ENSEEUG00000008467	TSEN54	99	44.111	ENSPNAG00000003770	tsen54	86	44.754	Pygocentrus_nattereri
ENSEEUG00000008467	TSEN54	100	73.085	ENSRNOG00000004598	Tsen54	86	72.648	Rattus_norvegicus
ENSEEUG00000008467	TSEN54	100	80.525	ENSRBIG00000043040	TSEN54	86	80.525	Rhinopithecus_bieti
ENSEEUG00000008467	TSEN54	100	80.525	ENSRROG00000030797	TSEN54	86	80.525	Rhinopithecus_roxellana
ENSEEUG00000008467	TSEN54	100	76.368	ENSSBOG00000013543	TSEN54	85	76.368	Saimiri_boliviensis_boliviensis
ENSEEUG00000008467	TSEN54	100	65.161	ENSSHAG00000018127	TSEN54	85	65.161	Sarcophilus_harrisii
ENSEEUG00000008467	TSEN54	94	41.781	ENSSFOG00015004093	tsen54	100	42.009	Scleropages_formosus
ENSEEUG00000008467	TSEN54	99	43.074	ENSSDUG00000021506	tsen54	86	42.735	Seriola_dumerili
ENSEEUG00000008467	TSEN54	99	42.857	ENSSLDG00000016303	tsen54	86	41.915	Seriola_lalandi_dorsalis
ENSEEUG00000008467	TSEN54	80	47.200	ENSSPUG00000008988	TSEN54	83	47.200	Sphenodon_punctatus
ENSEEUG00000008467	TSEN54	99	43.534	ENSSPAG00000008098	-	77	60.811	Stegastes_partitus
ENSEEUG00000008467	TSEN54	66	60.811	ENSSPAG00000008047	tsen54	77	60.811	Stegastes_partitus
ENSEEUG00000008467	TSEN54	100	84.026	ENSSSCG00000036852	TSEN54	96	84.026	Sus_scrofa
ENSEEUG00000008467	TSEN54	100	50.000	ENSTGUG00000008548	TSEN54	100	49.351	Taeniopygia_guttata
ENSEEUG00000008467	TSEN54	99	41.794	ENSTRUG00000004230	tsen54	65	63.964	Takifugu_rubripes
ENSEEUG00000008467	TSEN54	100	83.188	ENSTTRG00000015828	TSEN54	100	83.188	Tursiops_truncatus
ENSEEUG00000008467	TSEN54	94	82.093	ENSUAMG00000010045	TSEN54	100	82.093	Ursus_americanus
ENSEEUG00000008467	TSEN54	97	82.697	ENSUMAG00000008979	TSEN54	100	82.697	Ursus_maritimus
ENSEEUG00000008467	TSEN54	100	83.589	ENSVVUG00000011411	TSEN54	87	83.589	Vulpes_vulpes
ENSEEUG00000008467	TSEN54	99	46.104	ENSXETG00000012532	tsen54	74	70.968	Xenopus_tropicalis
ENSEEUG00000008467	TSEN54	94	42.334	ENSXCOG00000018245	tsen54	75	67.000	Xiphophorus_couchianus
ENSEEUG00000008467	TSEN54	99	46.507	ENSXMAG00000018818	tsen54	85	45.633	Xiphophorus_maculatus