EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000008528 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 37378 bases
Position: chrGeneScaffold_6667:129819-167196
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000007809	UvrD-helicase	PF00580.21	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000008571	TRANK1-201	7188	-	ENSEEUP00000007809	2396 (aa)	-	UPI0000F641C6

Gene Model

Click here to download ENSEEUG00000008528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000008528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000008528	TRANK1	100	56.120	ENSAPLG00000010356	TRANK1	97	55.879	Anas_platyrhynchos
ENSEEUG00000008528	TRANK1	99	80.795	ENSTSYG00000025860	TRANK1	82	80.736	Carlito_syrichta
ENSEEUG00000008528	TRANK1	100	79.496	ENSCLAG00000003643	TRANK1	83	79.496	Chinchilla_lanigera
ENSEEUG00000008528	TRANK1	97	67.239	ENSCPBG00000013529	TRANK1	80	67.475	Chrysemys_picta_bellii
ENSEEUG00000008528	TRANK1	99	82.007	ENSCANG00000039915	TRANK1	82	82.022	Colobus_angolensis_palliatus
ENSEEUG00000008528	TRANK1	100	77.474	ENSDNOG00000003573	TRANK1	82	77.553	Dasypus_novemcinctus
ENSEEUG00000008528	TRANK1	99	79.760	ENSEASG00005007374	TRANK1	82	79.760	Equus_asinus_asinus
ENSEEUG00000008528	TRANK1	99	79.967	ENSECAG00000018264	TRANK1	81	79.967	Equus_caballus
ENSEEUG00000008528	TRANK1	99	57.242	ENSFALG00000002875	TRANK1	81	57.079	Ficedula_albicollis
ENSEEUG00000008528	TRANK1	68	62.562	ENSGALG00000037629	TRANK1	74	62.194	Gallus_gallus
ENSEEUG00000008528	TRANK1	99	62.002	ENSGAGG00000009012	TRANK1	90	61.981	Gopherus_agassizii
ENSEEUG00000008528	TRANK1	99	47.669	ENSLOCG00000004808	TRANK1	82	47.634	Lepisosteus_oculatus
ENSEEUG00000008528	TRANK1	100	57.360	ENSMGAG00000011934	TRANK1	82	57.137	Meleagris_gallopavo
ENSEEUG00000008528	TRANK1	100	79.215	ENSMLUG00000003537	TRANK1	84	79.265	Myotis_lucifugus
ENSEEUG00000008528	TRANK1	100	79.165	ENSODEG00000003882	TRANK1	82	79.206	Octodon_degus
ENSEEUG00000008528	TRANK1	99	61.214	ENSPSIG00000010217	TRANK1	81	61.305	Pelodiscus_sinensis
ENSEEUG00000008528	TRANK1	79	71.404	ENSPCAG00000002172	-	85	71.404	Procavia_capensis
ENSEEUG00000008528	TRANK1	96	74.297	ENSPVAG00000004199	TRANK1	97	74.048	Pteropus_vampyrus
ENSEEUG00000008528	TRANK1	99	82.007	ENSRBIG00000012281	TRANK1	82	82.022	Rhinopithecus_bieti
ENSEEUG00000008528	TRANK1	99	82.048	ENSRROG00000044487	TRANK1	82	82.063	Rhinopithecus_roxellana
ENSEEUG00000008528	TRANK1	74	89.973	ENSSARG00000007861	-	74	89.973	Sorex_araneus
ENSEEUG00000008528	TRANK1	86	64.611	ENSSPUG00000015974	TRANK1	92	73.230	Sphenodon_punctatus
ENSEEUG00000008528	TRANK1	99	57.160	ENSTGUG00000005694	TRANK1	98	56.927	Taeniopygia_guttata